Strain Fitness in Sphingobium sp. HT1-2 around GFF5278

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
5,268,664	+		GFF5277	0.15	-1.0
5,268,665	+		GFF5277	0.15	+0.2
5,268,678	+		GFF5277	0.17	-1.1
5,268,702	+		GFF5277	0.20	+0.8
5,268,702	+		GFF5277	0.20	+0.1
5,268,702	+		GFF5277	0.20	-1.1
5,268,702	+		GFF5277	0.20	-0.5
5,268,702	+		GFF5277	0.20	-0.7
5,268,702	+		GFF5277	0.20	-1.7
5,268,702	+		GFF5277	0.20	+0.2
5,268,702	+		GFF5277	0.20	-0.7
5,268,702	+		GFF5277	0.20	-1.4
5,268,702	+		GFF5277	0.20	+0.1
5,268,702	+		GFF5277	0.20	-0.4
5,268,702	+		GFF5277	0.20	-1.2
5,268,709	+		GFF5277	0.21	-1.5
5,268,710	+		GFF5277	0.21	+0.7
5,268,710	+		GFF5277	0.21	+0.6
5,268,710	+		GFF5277	0.21	-1.2
5,268,710	-		GFF5277	0.21	-0.8
5,268,710	-		GFF5277	0.21	-0.6
5,268,710	-		GFF5277	0.21	-1.5
5,268,710	-		GFF5277	0.21	-1.4
5,268,715	+		GFF5277	0.21	-0.8
5,268,715	+		GFF5277	0.21	-1.1
5,268,715	+		GFF5277	0.21	-1.7
5,268,715	+		GFF5277	0.21	-1.6
5,268,715	+		GFF5277	0.21	+0.7
5,268,715	+		GFF5277	0.21	-0.7
5,268,715	+		GFF5277	0.21	-0.4
5,268,715	+		GFF5277	0.21	+0.6
5,268,715	+		GFF5277	0.21	+0.1
5,268,717	-		GFF5277	0.21	-0.7
5,268,718	-		GFF5277	0.22	+0.5
5,268,718	-		GFF5277	0.22	-2.5
5,268,718	-		GFF5277	0.22	-0.9
5,268,723	-		GFF5277	0.22	-1.4
5,268,723	-		GFF5277	0.22	-1.3
5,268,723	-		GFF5277	0.22	-0.4
5,268,723	-		GFF5277	0.22	+0.7
5,268,723	-		GFF5277	0.22	-0.4
5,268,723	-		GFF5277	0.22	+1.3
5,268,723	-		GFF5277	0.22	+0.2
5,268,728	-		GFF5277	0.23	+0.3
5,268,741	+		GFF5277	0.24	-0.7
5,268,751	+		GFF5277	0.26	-0.9
5,268,751	+		GFF5277	0.26	-0.0
5,268,751	+		GFF5277	0.26	+0.3
5,268,751	+		GFF5277	0.26	-0.4
5,268,751	+		GFF5277	0.26	+0.1
5,268,751	+		GFF5277	0.26	+1.2
5,268,758	+		GFF5277	0.26	-1.1
5,268,758	+		GFF5277	0.26	+0.4
5,268,759	-		GFF5277	0.26	-2.7
5,268,759	-		GFF5277	0.26	+0.3
5,268,759	-		GFF5277	0.26	-1.1
5,268,759	-		GFF5277	0.26	+0.7
5,268,759	-		GFF5277	0.26	+0.1
5,268,759	-		GFF5277	0.26	+1.0
5,268,766	-		GFF5277	0.27	-0.7
5,268,766	-		GFF5277	0.27	-1.4
5,268,766	-		GFF5277	0.27	+0.3
5,268,773	+		GFF5277	0.28	+1.4
5,268,773	+		GFF5277	0.28	-0.2
5,268,773	+		GFF5277	0.28	-0.5
5,268,773	+		GFF5277	0.28	+0.5
5,268,773	+		GFF5277	0.28	+0.6
5,268,773	+		GFF5277	0.28	-1.8
5,268,776	-		GFF5277	0.29	-0.9
5,268,781	-		GFF5277	0.29	+0.1
5,268,781	-		GFF5277	0.29	-1.3
5,268,781	-		GFF5277	0.29	+0.1
5,268,781	-		GFF5277	0.29	-1.5
5,268,781	-		GFF5277	0.29	+0.3
5,268,781	-		GFF5277	0.29	+0.3
5,268,781	-		GFF5277	0.29	-2.4
5,268,781	-		GFF5277	0.29	-0.6
5,268,781	-		GFF5277	0.29	-0.7
5,268,781	-		GFF5277	0.29	-0.7
5,268,781	-		GFF5277	0.29	-0.1
5,268,781	-		GFF5277	0.29	+0.8
5,268,781	-		GFF5277	0.29	-0.3
5,268,783	+		GFF5277	0.29	+0.5
5,268,786	-		GFF5277	0.30	-0.3
5,268,788	-		GFF5277	0.30	-0.6
5,268,819	-		GFF5277	0.34	-1.0
5,268,822	+		GFF5277	0.34	-1.1
5,268,822	+		GFF5277	0.34	-2.0
5,268,822	+		GFF5277	0.34	-1.3
5,268,822	+		GFF5277	0.34	-0.8
5,268,822	+		GFF5277	0.34	+0.4
5,268,822	+		GFF5277	0.34	+0.3
5,268,822	+		GFF5277	0.34	-0.0
5,268,822	+		GFF5277	0.34	+1.3
5,268,822	+		GFF5277	0.34	+0.3
5,268,822	+		GFF5277	0.34	-1.1
5,268,822	+		GFF5277	0.34	+0.1
5,268,822	+		GFF5277	0.34	+0.0
5,268,830	-		GFF5277	0.35	-0.9
5,268,830	-		GFF5277	0.35	-0.0
5,268,830	-		GFF5277	0.35	+1.3
5,268,830	-		GFF5277	0.35	+0.0
5,268,830	-		GFF5277	0.35	+0.6
5,268,830	-		GFF5277	0.35	-1.2
5,268,830	-		GFF5277	0.35	-0.8
5,268,830	-		GFF5277	0.35	-1.2
5,268,830	-		GFF5277	0.35	+1.2
5,268,830	-		GFF5277	0.35	-1.0
5,268,830	-		GFF5277	0.35	-0.5
5,268,830	-		GFF5277	0.35	+0.0
5,268,830	-		GFF5277	0.35	+1.2
5,268,830	-		GFF5277	0.35	+0.2
5,268,835	-		GFF5277	0.36	+0.7
5,268,837	+		GFF5277	0.36	-0.1
5,268,845	-		GFF5277	0.37	-0.1
5,268,855	+		GFF5277	0.38	+0.1
5,268,863	+		GFF5277	0.39	-0.1
5,268,869	+		GFF5277	0.40	+1.0
5,268,869	+		GFF5277	0.40	-0.7
5,268,871	-		GFF5277	0.40	-0.2
5,268,874	+		GFF5277	0.40	-1.7
5,268,874	+		GFF5277	0.40	-0.8
5,268,874	+		GFF5277	0.40	-1.1
5,268,874	+		GFF5277	0.40	-1.0
5,268,882	-		GFF5277	0.41	-1.3
5,268,882	-		GFF5277	0.41	+0.2
5,268,882	-		GFF5277	0.41	+0.2
5,268,890	+		GFF5277	0.42	-1.5
5,268,890	+		GFF5277	0.42	-0.6
5,268,892	+		GFF5277	0.42	-0.1
5,268,892	+		GFF5277	0.42	-0.9
5,268,892	+		GFF5277	0.42	+1.3
5,268,900	+		GFF5277	0.43	-0.8
5,268,900	+		GFF5277	0.43	+0.1
5,268,900	-		GFF5277	0.43	-0.4
5,268,900	-		GFF5277	0.43	-0.6
5,268,900	-		GFF5277	0.43	-0.7
5,268,900	-		GFF5277	0.43	+0.1
5,268,900	-		GFF5277	0.43	+0.4
5,268,915	+		GFF5277	0.45	-0.7
5,268,915	+		GFF5277	0.45	+0.6
5,268,923	+		GFF5277	0.46	-1.0
5,268,933	+		GFF5277	0.47	+0.3
5,268,933	+		GFF5277	0.47	-1.0
5,268,933	+		GFF5277	0.47	+1.0
5,268,933	+		GFF5277	0.47	+0.8
5,268,933	+		GFF5277	0.47	+0.8
5,268,933	+		GFF5277	0.47	-1.9
5,268,933	+		GFF5277	0.47	+1.9
5,268,941	-		GFF5277	0.48	+0.0
5,268,941	-		GFF5277	0.48	-0.2
5,268,941	-		GFF5277	0.48	-1.6
5,268,941	-		GFF5277	0.48	+0.5
5,268,941	-		GFF5277	0.48	+0.1
5,268,941	-		GFF5277	0.48	-1.0
5,268,941	-		GFF5277	0.48	+1.4
5,268,941	-		GFF5277	0.48	-0.2
5,268,941	-		GFF5277	0.48	+0.6
5,268,941	-		GFF5277	0.48	-0.7
5,268,941	-		GFF5277	0.48	+1.2
5,268,941	-		GFF5277	0.48	+0.2
5,268,941	-		GFF5277	0.48	-1.1
5,268,943	+		GFF5277	0.49	-1.0
5,268,976	-		GFF5277	0.53	+0.4
5,268,976	-		GFF5277	0.53	-1.0
5,268,976	-		GFF5277	0.53	-0.1
5,268,976	-		GFF5277	0.53	-0.4
5,268,976	-		GFF5277	0.53	-1.7
5,268,986	-		GFF5277	0.54	-0.7
5,268,986	-		GFF5277	0.54	-0.8
5,269,062	+		GFF5277	0.63	-0.3
5,269,068	+		GFF5277	0.64	-1.7
5,269,069	+		GFF5277	0.64	+0.1
5,269,070	+		GFF5277	0.64	+0.9
5,269,085	+		GFF5277	0.66	+0.6
5,269,085	+		GFF5277	0.66	+1.9
5,269,094	+		GFF5277	0.67	-0.5
5,269,095	+		GFF5277	0.67	-2.2
5,269,103	-		GFF5277	0.68	-0.3
5,269,122	+		GFF5277	0.70	-0.3
5,269,130	-		GFF5277	0.71	-0.1
5,269,132	+		GFF5277	0.71	-0.4
5,269,137	+		GFF5277	0.72	-0.0
5,269,140	-		GFF5277	0.72	-0.0
5,269,142	+		GFF5277	0.72	-1.5
5,269,142	+		GFF5277	0.72	-0.8
5,269,150	-		GFF5277	0.73	-0.8
5,269,150	-		GFF5277	0.73	+0.1
5,269,154	+		GFF5277	0.74	-0.9
5,269,157	-		GFF5277	0.74	-0.1
5,269,159	+		GFF5277	0.74	-0.4
5,269,160	+		GFF5277	0.75	+0.3
5,269,160	+		GFF5277	0.75	-0.6
5,269,168	-		GFF5277	0.76	-0.7
5,269,168	-		GFF5277	0.76	-0.1
5,269,168	-		GFF5277	0.76	+0.2
5,269,173	-		GFF5277	0.76	-0.3
5,269,184	+		GFF5277	0.77	+0.1
5,269,184	+		GFF5277	0.77	-0.4
5,269,184	+		GFF5277	0.77	+0.1
5,269,187	-		GFF5277	0.78	-1.1
5,269,187	-		GFF5277	0.78	+1.6
5,269,192	-		GFF5277	0.78	+0.6
5,269,192	-		GFF5277	0.78	-0.7
5,269,194	+		GFF5277	0.79	+0.5
5,269,194	+		GFF5277	0.79	+1.6
5,269,194	+		GFF5277	0.79	+1.8
5,269,194	+		GFF5277	0.79	-1.8
5,269,196	+		GFF5277	0.79	-1.2
5,269,196	-		GFF5277	0.79	-1.0
5,269,199	+		GFF5277	0.79	-0.7
5,269,199	+		GFF5277	0.79	-1.9
5,269,199	+		GFF5277	0.79	-1.0
5,269,199	+		GFF5277	0.79	-0.9
5,269,199	+		GFF5277	0.79	-0.5
5,269,200	+		GFF5277	0.79	-0.3
5,269,202	-		GFF5277	0.80	+1.3
5,269,202	-		GFF5277	0.80	-0.0
5,269,202	-		GFF5277	0.80	-1.3
5,269,204	+		GFF5277	0.80	-1.7
5,269,204	+		GFF5277	0.80	-0.5
5,269,207	-		GFF5277	0.80	-1.5
5,269,207	-		GFF5277	0.80	-1.4
5,269,207	-		GFF5277	0.80	-0.8
5,269,207	-		GFF5277	0.80	-1.8
5,269,207	-		GFF5277	0.80	-1.6
5,269,211	+		GFF5277	0.81	-2.3
5,269,211	+		GFF5277	0.81	+0.6
5,269,211	+		GFF5277	0.81	-1.6
5,269,211	+		GFF5277	0.81	-0.1
5,269,211	+		GFF5277	0.81	+1.5
5,269,211	+		GFF5277	0.81	+0.5
5,269,212	-		GFF5277	0.81	-0.2
5,269,219	-		GFF5277	0.82	-1.3
5,269,219	-		GFF5277	0.82	+0.6
5,269,238	-		GFF5277	0.84	-1.5
5,269,238	-		GFF5277	0.84	+0.6
5,269,243	+		GFF5277	0.85	+0.2
5,269,245	+		GFF5277	0.85	-0.5
5,269,268	+		GFF5277	0.88	+1.0
5,269,268	+		GFF5277	0.88	+0.5
5,269,268	+		GFF5277	0.88	-0.0
5,269,268	+		GFF5277	0.88	+0.7
5,269,268	+		GFF5277	0.88	-0.9
5,269,268	+		GFF5277	0.88	-2.1
5,269,273	+		GFF5277	0.88	+0.6
5,269,276	-		GFF5277	0.88	+0.3
5,269,276	-		GFF5277	0.88	-2.5
5,269,276	-		GFF5277	0.88	+2.4
5,269,276	-		GFF5277	0.88	+1.5
5,269,276	-		GFF5277	0.88	+0.3
5,269,278	-		GFF5277	0.89	+0.6
5,269,296	-				+1.4
5,269,298	-				-0.8
5,269,302	-				-0.5
5,269,306	-				+0.7
5,269,321	-				-1.1
5,269,510	-				-1.2
5,269,534	+				-1.4
5,269,544	+				+0.3
5,269,547	-				-0.7
5,269,562	+				-1.2
5,269,574	+				-0.2
5,269,580	-				+0.3
5,269,582	-				-1.2
5,269,594	+				-0.8
5,269,594	+				-0.9
5,269,594	+				-2.3
5,269,601	+				-0.3
5,269,612	+				+0.8
5,269,613	+				-1.4
5,269,621	-				-0.7
5,269,632	-				-0.7
5,269,645	+				-1.3
5,269,645	+				-0.5
5,269,645	+				+0.6
5,269,645	+				-0.5
5,269,653	-				+0.3
5,269,653	-				-1.1
5,269,653	-				-0.9
5,269,659	+				-0.7
5,269,667	-				+0.7
5,269,668	+				-0.8
5,269,674	+				+0.2
5,269,674	+				-0.8
5,269,674	+				-0.0
5,269,674	+				+0.7
5,269,674	+				-0.1
5,269,674	+				-1.0
5,269,676	-				-0.7
5,269,682	-				-0.8
5,269,682	-				+2.1
5,269,682	-				-1.2
5,269,682	-				-2.3
5,269,682	-				+0.8
5,269,684	+				+0.1
5,269,692	-				-0.9
5,269,697	+				-2.1
5,269,697	+				-1.0
5,269,697	+				+0.0
5,269,697	+				-0.7
5,269,705	-				-0.0
5,269,705	-				+0.5
5,269,728	+				+1.6
5,269,730	+		GFF5278	0.10	-0.2
5,269,736	-		GFF5278	0.11	+0.2
5,269,742	+		GFF5278	0.12	-1.8
5,269,747	+		GFF5278	0.13	-1.1
5,269,749	-		GFF5278	0.13	-0.6
5,269,749	-		GFF5278	0.13	-0.9
5,269,750	-		GFF5278	0.13	+0.4
5,269,750	-		GFF5278	0.13	+1.0
5,269,797	+		GFF5278	0.20	+1.1
5,269,797	+		GFF5278	0.20	-1.6
5,269,797	+		GFF5278	0.20	-1.9
5,269,797	+		GFF5278	0.20	-1.0
5,269,805	+		GFF5278	0.21	-0.5
5,269,805	-		GFF5278	0.21	-1.5
5,269,805	-		GFF5278	0.21	-0.4
5,269,805	-		GFF5278	0.21	-1.0
5,269,813	-		GFF5278	0.23	-1.0
5,269,813	-		GFF5278	0.23	-0.5
5,269,821	+		GFF5278	0.24	-1.8
5,269,821	+		GFF5278	0.24	-0.0
5,269,821	+		GFF5278	0.24	-1.0
5,269,829	-		GFF5278	0.25	-1.2
5,269,844	+		GFF5278	0.27	+0.9
5,269,877	-		GFF5278	0.32	+0.0
5,269,904	+		GFF5278	0.36	-0.9
5,269,912	-		GFF5278	0.37	-1.3
5,269,940	+		GFF5278	0.41	-1.0
5,269,941	-		GFF5278	0.41	-1.6
5,269,941	-		GFF5278	0.41	+0.9
5,269,955	-		GFF5278	0.44	-0.9
5,269,957	+		GFF5278	0.44	-0.8
5,269,957	+		GFF5278	0.44	+1.3
5,269,965	-		GFF5278	0.45	-2.8
5,269,965	-		GFF5278	0.45	-0.7
5,269,988	+		GFF5278	0.48	-1.3
5,269,991	-		GFF5278	0.49	-0.1
5,269,991	-		GFF5278	0.49	-0.7
5,270,001	-		GFF5278	0.50	-1.6
5,270,032	+		GFF5278	0.55	-0.0
5,270,037	-		GFF5278	0.56	+1.6
5,270,037	-		GFF5278	0.56	+0.9
5,270,040	+		GFF5278	0.56	-0.9
5,270,048	-		GFF5278	0.57	-0.7
5,270,048	-		GFF5278	0.57	-0.5
5,270,058	-		GFF5278	0.59	-1.3
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5,270,113	-		GFF5278	0.67	-1.5
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5,270,142	-		GFF5278	0.71	-0.7
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5,270,170	+		GFF5278	0.75	+0.7
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5,270,228	+		GFF5278	0.84	-1.3
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5,270,236	-		GFF5278	0.85	-0.9
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5,270,241	-		GFF5278	0.86	-1.1
5,270,259	+		GFF5278	0.89	-0.8
5,270,259	+		GFF5278	0.89	-0.3
5,270,268	-				-1.5
5,270,292	+				-0.9
5,270,295	+				-0.4
5,270,304	-				-1.7
5,270,313	-				+0.6
5,270,313	-				+0.0
5,270,315	+				-2.2
5,270,315	+				-1.2
5,270,325	+				-0.8
5,270,325	+				-0.5
5,270,325	+				+0.3
5,270,325	+				+0.7
5,270,325	+				+0.3
5,270,333	-				-0.7
5,270,333	-				+0.9
5,270,333	-				-0.0
5,270,363	+				-2.2
5,270,363	+				-0.9
5,270,374	-				-0.9
5,270,385	+				-1.7
5,270,413	+				-0.0
5,270,456	+				-1.4
5,270,484	-				+0.0
5,270,547	+		GFF5279	0.16	+0.2
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5,270,589	+		GFF5279	0.24	-1.1
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5,270,900	-		GFF5279	0.83	-2.8
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5,270,906	-		GFF5279	0.84	-0.5
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5,270,917	+		GFF5279	0.86	-1.6
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5,270,937	+				+0.8
5,270,945	-				-1.5
5,270,958	+				-1.3
5,270,961	-				-1.2
5,270,972	+				-0.6
5,270,972	+				-1.3
5,270,980	-				-0.7
5,270,980	-				-0.1
5,270,981	-				-1.0
5,271,011	+				-1.4
5,271,020	-				-0.9
5,271,024	-				-1.0
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5,271,066	+				+0.9
5,271,079	+				-0.8
5,271,084	-				+1.1
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5,271,162	+				-0.8
5,271,165	+				-0.4
5,271,202	+				+0.7
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5,271,249	-				-0.4
5,271,259	+				+1.0
5,271,259	+				-1.0
5,271,267	+				-1.1
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5,271,277	+				-1.5
5,271,280	-				+0.2
5,271,280	-				-0.8
5,271,315	+				-2.0
5,271,322	-				-0.7
5,271,323	-				-1.5