Strain Fitness in Sphingobium sp. HT1-2 around GFF4738

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,736,856	+		GFF4737	0.26	-0.7
4,736,865	-		GFF4737	0.27	-1.4
4,736,878	+		GFF4737	0.28	-0.7
4,736,878	+		GFF4737	0.28	+0.3
4,736,878	+		GFF4737	0.28	+0.1
4,736,878	+		GFF4737	0.28	-0.4
4,736,886	-		GFF4737	0.29	-1.8
4,736,886	-		GFF4737	0.29	-1.5
4,736,886	-		GFF4737	0.29	-0.7
4,736,895	+		GFF4737	0.30	-0.6
4,736,895	+		GFF4737	0.30	-1.0
4,736,902	+		GFF4737	0.30	+0.4
4,736,910	-		GFF4737	0.31	-2.1
4,736,916	-		GFF4737	0.31	-0.6
4,736,942	+		GFF4737	0.34	+0.9
4,736,956	+		GFF4737	0.35	-1.2
4,736,957	+		GFF4737	0.35	-0.1
4,736,965	-		GFF4737	0.36	-0.2
4,737,006	+		GFF4737	0.39	+1.5
4,737,008	+		GFF4737	0.40	+0.3
4,737,009	-		GFF4737	0.40	-1.0
4,737,018	+		GFF4737	0.40	+1.1
4,737,018	+		GFF4737	0.40	+0.3
4,737,026	-		GFF4737	0.41	+1.5
4,737,026	-		GFF4737	0.41	-0.8
4,737,026	-		GFF4737	0.41	+0.2
4,737,032	+		GFF4737	0.42	-1.5
4,737,032	+		GFF4737	0.42	-0.9
4,737,032	+		GFF4737	0.42	-1.7
4,737,032	+		GFF4737	0.42	-0.0
4,737,035	-		GFF4737	0.42	-0.2
4,737,037	+		GFF4737	0.42	+0.7
4,737,037	+		GFF4737	0.42	-0.4
4,737,040	-		GFF4737	0.42	-0.8
4,737,040	-		GFF4737	0.42	+0.2
4,737,040	-		GFF4737	0.42	-0.8
4,737,061	+		GFF4737	0.44	-1.3
4,737,063	+		GFF4737	0.44	+0.8
4,737,063	+		GFF4737	0.44	-1.2
4,737,063	+		GFF4737	0.44	-1.9
4,737,063	+		GFF4737	0.44	-0.5
4,737,063	+		GFF4737	0.44	-0.4
4,737,063	+		GFF4737	0.44	+1.2
4,737,071	-		GFF4737	0.45	+0.0
4,737,071	-		GFF4737	0.45	-1.3
4,737,079	+		GFF4737	0.46	+0.5
4,737,079	+		GFF4737	0.46	+1.6
4,737,079	+		GFF4737	0.46	+0.4
4,737,079	+		GFF4737	0.46	-0.9
4,737,079	+		GFF4737	0.46	+1.1
4,737,079	+		GFF4737	0.46	-0.7
4,737,079	+		GFF4737	0.46	+0.6
4,737,079	+		GFF4737	0.46	-0.8
4,737,087	-		GFF4737	0.47	-1.4
4,737,087	-		GFF4737	0.47	-2.3
4,737,087	-		GFF4737	0.47	+0.3
4,737,087	-		GFF4737	0.47	-0.7
4,737,087	-		GFF4737	0.47	-0.9
4,737,096	+		GFF4737	0.47	-0.8
4,737,096	+		GFF4737	0.47	-0.1
4,737,102	-		GFF4737	0.48	-1.3
4,737,124	+		GFF4737	0.50	-0.3
4,737,132	-		GFF4737	0.51	+0.3
4,737,133	+		GFF4737	0.51	-1.1
4,737,133	+		GFF4737	0.51	+0.3
4,737,142	+		GFF4737	0.51	-1.4
4,737,156	+		GFF4737	0.53	-1.5
4,737,158	+		GFF4737	0.53	+0.0
4,737,158	+		GFF4737	0.53	-1.6
4,737,158	+		GFF4737	0.53	+0.5
4,737,158	+		GFF4737	0.53	-0.1
4,737,158	+		GFF4737	0.53	-1.1
4,737,158	+		GFF4737	0.53	-0.9
4,737,166	-		GFF4737	0.54	-0.0
4,737,166	-		GFF4737	0.54	-1.0
4,737,166	-		GFF4737	0.54	-0.4
4,737,166	-		GFF4737	0.54	-2.5
4,737,166	-		GFF4737	0.54	-0.4
4,737,168	+		GFF4737	0.54	+0.2
4,737,176	-		GFF4737	0.54	-1.2
4,737,185	+		GFF4737	0.55	+0.4
4,737,186	-		GFF4737	0.55	-1.4
4,737,190	+		GFF4737	0.56	-0.5
4,737,200	+		GFF4737	0.57	-0.7
4,737,206	+		GFF4737	0.57	-1.4
4,737,208	-		GFF4737	0.57	-1.3
4,737,215	+		GFF4737	0.58	+0.4
4,737,215	+		GFF4737	0.58	+0.1
4,737,215	+		GFF4737	0.58	+0.1
4,737,218	-		GFF4737	0.58	-1.4
4,737,220	+		GFF4737	0.58	+0.6
4,737,220	+		GFF4737	0.58	-0.0
4,737,220	+		GFF4737	0.58	+0.4
4,737,223	-		GFF4737	0.59	-0.1
4,737,228	-		GFF4737	0.59	-0.0
4,737,268	+		GFF4737	0.63	-1.6
4,737,281	+		GFF4737	0.64	-0.5
4,737,289	+		GFF4737	0.64	-0.7
4,737,291	-		GFF4737	0.65	+0.4
4,737,356	-		GFF4737	0.70	-1.0
4,737,386	-		GFF4737	0.73	-0.8
4,737,386	-		GFF4737	0.73	-0.9
4,737,386	-		GFF4737	0.73	+0.3
4,737,386	-		GFF4737	0.73	-0.2
4,737,386	-		GFF4737	0.73	-0.0
4,737,395	-		GFF4737	0.74	+0.6
4,737,395	-		GFF4737	0.74	-0.9
4,737,399	+		GFF4737	0.74	-1.4
4,737,417	+		GFF4737	0.76	+0.1
4,737,417	-		GFF4737	0.76	-0.9
4,737,430	+		GFF4737	0.77	-0.5
4,737,447	-		GFF4737	0.78	-1.8
4,737,449	-		GFF4737	0.79	-1.8
4,737,454	+		GFF4737	0.79	+0.1
4,737,454	+		GFF4737	0.79	-1.8
4,737,454	+		GFF4737	0.79	-1.4
4,737,459	+		GFF4737	0.79	-0.8
4,737,459	+		GFF4737	0.79	-0.8
4,737,459	+		GFF4737	0.79	-1.8
4,737,462	-		GFF4737	0.80	-1.2
4,737,462	-		GFF4737	0.80	-1.0
4,737,474	+		GFF4737	0.81	+0.2
4,737,486	-		GFF4737	0.82	-1.2
4,737,488	+		GFF4737	0.82	+0.1
4,737,488	+		GFF4737	0.82	-0.3
4,737,519	-		GFF4737	0.85	+0.8
4,737,545	+		GFF4737	0.87	-0.2
4,737,545	+		GFF4737	0.87	-0.7
4,737,549	-		GFF4737	0.87	-0.0
4,737,568	-		GFF4737	0.89	+0.6
4,737,568	-		GFF4737	0.89	+0.0
4,737,569	+		GFF4737	0.89	-1.1
4,737,589	+				+0.3
4,737,615	+				+0.6
4,737,615	+				-0.0
4,737,615	+				+1.1
4,737,615	+				+0.4
4,737,615	+				+0.3
4,737,615	+				+0.6
4,737,615	+				-0.9
4,737,618	+				+0.3
4,737,623	-				-2.0
4,737,623	-				+0.4
4,737,623	-				+0.3
4,737,625	+				-2.0
4,737,625	+				-0.6
4,737,625	+				-0.7
4,737,625	+				-0.5
4,737,625	+				+0.5
4,737,625	+				+0.2
4,737,625	+				-0.7
4,737,626	-				+1.3
4,737,628	-				-1.3
4,737,628	-				-0.9
4,737,633	-				+0.3
4,737,633	-				-0.4
4,737,633	-				-1.2
4,737,633	-				-0.2
4,737,633	-				-0.9
4,737,633	-				+0.1
4,737,651	+				+0.4
4,737,666	+				+1.1
4,737,674	-				+0.3
4,737,674	-				-0.1
4,737,675	+				+0.1
4,737,675	+				+0.3
4,737,675	+				+0.1
4,737,675	+				-0.9
4,737,675	+				-0.2
4,737,683	-				+0.2
4,737,683	-				-1.6
4,737,683	-				-1.0
4,737,683	-				+0.5
4,737,683	-				-0.2
4,737,683	-				+0.1
4,737,701	+				-1.2
4,737,718	-				-0.9
4,737,721	+				+0.2
4,737,727	+				+1.5
4,737,727	+				-0.3
4,737,727	+				-0.3
4,737,727	+				-0.4
4,737,729	-				-1.2
4,737,729	-				-0.4
4,737,735	-				-0.6
4,737,735	-				+0.9
4,737,735	-				-0.8
4,737,740	+				-1.0
4,737,766	+				+0.5
4,737,767	+				+0.2
4,737,769	-				-0.0
4,737,769	-				-0.4
4,737,774	-				-0.6
4,737,780	+				-0.7
4,737,780	-				-0.8
4,737,785	+				-1.1
4,737,787	+				-1.2
4,737,792	+				-0.8
4,737,792	+				+0.1
4,737,792	+				-1.3
4,737,793	-				-1.4
4,737,795	+				+0.7
4,737,795	+				+0.6
4,737,795	+				-0.4
4,737,795	+				-0.9
4,737,795	+				+0.6
4,737,795	+				+0.5
4,737,795	+				+2.1
4,737,800	-				-0.5
4,737,803	-				+0.9
4,737,803	-				+0.2
4,737,803	-				+1.2
4,737,834	-				+0.8
4,737,839	-				-1.4
4,737,855	-				+1.3
4,737,855	-				-1.0
4,737,864	+				+1.5
4,737,872	-				+0.6
4,737,872	-				-1.4
4,737,905	+				-0.8
4,737,905	+				-1.1
4,737,905	+				-0.6
4,737,905	+				-0.1
4,737,908	-				-1.8
4,737,913	-				-1.8
4,737,918	+				+0.5
4,737,918	+				+0.1
4,737,932	+				-1.2
4,737,942	+				-1.6
4,737,968	-		GFF4738	0.12	+0.6
4,737,975	+		GFF4738	0.13	+0.3
4,737,983	-		GFF4738	0.14	-0.1
4,737,996	+		GFF4738	0.16	-1.3
4,737,996	+		GFF4738	0.16	-0.8
4,737,996	+		GFF4738	0.16	-1.9
4,737,996	+		GFF4738	0.16	+0.6
4,737,996	+		GFF4738	0.16	-1.3
4,737,996	+		GFF4738	0.16	+0.5
4,737,996	+		GFF4738	0.16	-0.3
4,738,004	-		GFF4738	0.16	-0.7
4,738,004	-		GFF4738	0.16	+0.7
4,738,004	-		GFF4738	0.16	-0.0
4,738,004	-		GFF4738	0.16	+0.3
4,738,004	-		GFF4738	0.16	-0.5
4,738,004	-		GFF4738	0.16	-0.6
4,738,009	-		GFF4738	0.17	+0.1
4,738,011	+		GFF4738	0.17	-0.5
4,738,011	+		GFF4738	0.17	-1.1
4,738,019	-		GFF4738	0.18	-0.0
4,738,027	-		GFF4738	0.19	-0.2
4,738,035	-		GFF4738	0.20	-1.4
4,738,035	-		GFF4738	0.20	+0.0
4,738,119	+		GFF4738	0.29	-1.1
4,738,119	+		GFF4738	0.29	-1.0
4,738,119	+		GFF4738	0.29	-0.8
4,738,119	+		GFF4738	0.29	+0.3
4,738,127	-		GFF4738	0.30	-2.0
4,738,127	-		GFF4738	0.30	-0.7
4,738,127	-		GFF4738	0.30	+1.6
4,738,127	-		GFF4738	0.30	+1.0
4,738,127	-		GFF4738	0.30	-0.9
4,738,127	-		GFF4738	0.30	-0.8
4,738,161	-		GFF4738	0.34	-1.1
4,738,167	+		GFF4738	0.34	+0.6
4,738,171	+		GFF4738	0.35	-1.1
4,738,175	-		GFF4738	0.35	-1.2
4,738,177	+		GFF4738	0.35	-0.7
4,738,177	-		GFF4738	0.35	+0.9
4,738,179	+		GFF4738	0.36	-0.9
4,738,179	-		GFF4738	0.36	+0.1
4,738,184	+		GFF4738	0.36	-0.8
4,738,223	-		GFF4738	0.40	-0.2
4,738,231	+		GFF4738	0.41	-0.9
4,738,231	+		GFF4738	0.41	-0.4
4,738,234	-		GFF4738	0.42	+1.1
4,738,239	-		GFF4738	0.42	-0.1
4,738,244	-		GFF4738	0.43	-0.0
4,738,276	-		GFF4738	0.46	-1.1
4,738,283	+		GFF4738	0.47	-1.7
4,738,283	+		GFF4738	0.47	-0.0
4,738,288	+		GFF4738	0.48	+1.0
4,738,291	-		GFF4738	0.48	-0.9
4,738,291	-		GFF4738	0.48	-1.0
4,738,291	-		GFF4738	0.48	-1.5
4,738,291	-		GFF4738	0.48	-1.1
4,738,291	-		GFF4738	0.48	-1.0
4,738,291	-		GFF4738	0.48	+0.4
4,738,291	-		GFF4738	0.48	-0.3
4,738,291	-		GFF4738	0.48	-1.4
4,738,291	-		GFF4738	0.48	-0.7
4,738,291	-		GFF4738	0.48	+0.3
4,738,301	-		GFF4738	0.49	-0.2
4,738,314	+		GFF4738	0.50	-1.6
4,738,320	-		GFF4738	0.51	-0.7
4,738,320	-		GFF4738	0.51	-0.2
4,738,320	-		GFF4738	0.51	+0.2
4,738,320	-		GFF4738	0.51	-1.9
4,738,336	+		GFF4738	0.53	+0.9
4,738,344	+		GFF4738	0.54	-0.7
4,738,344	+		GFF4738	0.54	+0.1
4,738,352	-		GFF4738	0.55	+0.2
4,738,352	-		GFF4738	0.55	-0.0
4,738,352	-		GFF4738	0.55	-0.4
4,738,355	+		GFF4738	0.55	-0.4
4,738,358	-		GFF4738	0.55	+0.1
4,738,363	-		GFF4738	0.56	-0.0
4,738,370	-		GFF4738	0.57	+0.2
4,738,401	+		GFF4738	0.60	+1.3
4,738,401	+		GFF4738	0.60	-0.5
4,738,401	+		GFF4738	0.60	-1.3
4,738,401	+		GFF4738	0.60	-0.5
4,738,401	+		GFF4738	0.60	-0.2
4,738,401	+		GFF4738	0.60	+0.0
4,738,401	+		GFF4738	0.60	-1.4
4,738,408	-		GFF4738	0.61	-0.1
4,738,409	-		GFF4738	0.61	-1.7
4,738,409	-		GFF4738	0.61	-2.0
4,738,421	+		GFF4738	0.62	+0.1
4,738,429	-		GFF4738	0.63	-0.6
4,738,432	+		GFF4738	0.63	-1.2
4,738,432	-		GFF4738	0.63	-1.2
4,738,433	-		GFF4738	0.63	-0.6
4,738,440	-		GFF4738	0.64	-1.6
4,738,440	-		GFF4738	0.64	-1.2
4,738,472	-		GFF4738	0.68	-0.1
4,738,492	-		GFF4738	0.70	-1.0
4,738,497	+		GFF4738	0.71	+0.0
4,738,505	-		GFF4738	0.71	-0.7
4,738,511	+		GFF4738	0.72	-1.1
4,738,511	+		GFF4738	0.72	-0.1
4,738,517	-		GFF4738	0.73	-0.3
4,738,526	-		GFF4738	0.74	-0.8
4,738,553	-		GFF4738	0.77	+0.1
4,738,572	-		GFF4738	0.79	+0.9
4,738,572	-		GFF4738	0.79	+0.3
4,738,572	-		GFF4738	0.79	+0.2
4,738,572	-		GFF4738	0.79	+0.4
4,738,588	+		GFF4738	0.80	+0.0
4,738,595	+		GFF4738	0.81	-0.1
4,738,614	-		GFF4738	0.83	+0.8
4,738,614	-		GFF4738	0.83	+0.4
4,738,641	+		GFF4738	0.86	-1.3
4,738,641	+		GFF4738	0.86	-0.3
4,738,643	+		GFF4738	0.87	-2.0
4,738,643	+		GFF4738	0.87	-1.0
4,738,643	+		GFF4738	0.87	+0.2
4,738,643	+		GFF4738	0.87	-1.9
4,738,653	-		GFF4738	0.88	+0.1
4,738,658	+		GFF4738	0.88	+0.8
4,738,658	+		GFF4738	0.88	+0.1
4,738,658	+		GFF4738	0.88	+1.2
4,738,658	+		GFF4738	0.88	+0.9
4,738,658	+		GFF4738	0.88	+1.4
4,738,660	-		GFF4738	0.88	-1.6
4,738,661	-		GFF4738	0.88	-1.6
4,738,666	-		GFF4738	0.89	+0.9
4,738,666	-		GFF4738	0.89	-1.3
4,738,667	-		GFF4738	0.89	+0.7
4,738,668	+		GFF4738	0.89	+0.3
4,738,668	+		GFF4738	0.89	-1.0
4,738,668	+		GFF4738	0.89	-1.6
4,738,668	+		GFF4738	0.89	-1.3
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