Strain Fitness in Sphingobium sp. HT1-2 around GFF2908

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,969,672	-		GFF2907	0.26	-0.3
2,969,672	-		GFF2907	0.26	+0.7
2,969,672	-		GFF2907	0.26	-0.5
2,969,672	-		GFF2907	0.26	-0.4
2,969,689	+		GFF2907	0.28	-0.8
2,969,707	-		GFF2907	0.29	-1.0
2,969,729	+		GFF2907	0.31	-1.2
2,969,780	+		GFF2907	0.35	-0.3
2,969,780	+		GFF2907	0.35	-2.9
2,969,780	+		GFF2907	0.35	+0.2
2,969,780	+		GFF2907	0.35	-0.9
2,969,780	+		GFF2907	0.35	+0.1
2,969,780	+		GFF2907	0.35	+0.3
2,969,788	-		GFF2907	0.35	-0.3
2,969,788	-		GFF2907	0.35	-1.5
2,969,788	-		GFF2907	0.35	+0.3
2,969,788	-		GFF2907	0.35	-1.2
2,969,788	-		GFF2907	0.35	-0.8
2,969,788	-		GFF2907	0.35	+0.8
2,969,788	-		GFF2907	0.35	-0.4
2,969,801	+		GFF2907	0.36	-0.5
2,969,801	+		GFF2907	0.36	-0.3
2,969,809	-		GFF2907	0.37	-0.3
2,969,809	-		GFF2907	0.37	-1.3
2,969,809	-		GFF2907	0.37	-1.6
2,969,809	-		GFF2907	0.37	-0.9
2,969,832	+		GFF2907	0.38	-0.3
2,969,840	-		GFF2907	0.39	-1.6
2,969,848	+		GFF2907	0.40	-0.7
2,969,848	+		GFF2907	0.40	+0.3
2,969,848	+		GFF2907	0.40	+0.8
2,969,853	+		GFF2907	0.40	+1.4
2,969,856	-		GFF2907	0.40	+1.2
2,969,856	-		GFF2907	0.40	-0.2
2,969,856	-		GFF2907	0.40	+0.5
2,969,856	-		GFF2907	0.40	+1.2
2,969,856	-		GFF2907	0.40	-0.8
2,969,858	+		GFF2907	0.40	-0.4
2,969,858	+		GFF2907	0.40	-2.7
2,969,858	+		GFF2907	0.40	+1.6
2,969,866	-		GFF2907	0.41	-0.5
2,969,881	+		GFF2907	0.42	-1.7
2,969,881	+		GFF2907	0.42	-2.3
2,969,889	-		GFF2907	0.43	-0.5
2,969,890	+		GFF2907	0.43	+0.1
2,969,891	+		GFF2907	0.43	-1.6
2,969,899	-		GFF2907	0.43	-0.3
2,969,899	-		GFF2907	0.43	-0.9
2,969,919	-		GFF2907	0.45	-0.5
2,969,933	-		GFF2907	0.46	-0.5
2,969,933	-		GFF2907	0.46	+1.3
2,969,944	+		GFF2907	0.47	+0.3
2,970,011	+		GFF2907	0.52	-0.7
2,970,019	-		GFF2907	0.52	-1.7
2,970,046	+		GFF2907	0.54	-0.8
2,970,052	+		GFF2907	0.55	-2.1
2,970,057	+		GFF2907	0.55	-0.8
2,970,057	+		GFF2907	0.55	-1.1
2,970,057	+		GFF2907	0.55	-1.2
2,970,057	+		GFF2907	0.55	-0.1
2,970,057	+		GFF2907	0.55	+0.6
2,970,057	+		GFF2907	0.55	-0.5
2,970,057	+		GFF2907	0.55	-0.8
2,970,057	+		GFF2907	0.55	-0.8
2,970,057	+		GFF2907	0.55	-2.1
2,970,057	+		GFF2907	0.55	+1.3
2,970,057	+		GFF2907	0.55	+1.3
2,970,057	+		GFF2907	0.55	-0.5
2,970,057	+		GFF2907	0.55	-1.2
2,970,057	+		GFF2907	0.55	-0.5
2,970,057	+		GFF2907	0.55	-1.4
2,970,057	+		GFF2907	0.55	-0.5
2,970,057	+		GFF2907	0.55	-0.4
2,970,065	-		GFF2907	0.56	-0.9
2,970,065	-		GFF2907	0.56	-0.7
2,970,065	-		GFF2907	0.56	-0.5
2,970,065	-		GFF2907	0.56	-0.9
2,970,065	-		GFF2907	0.56	-0.4
2,970,065	-		GFF2907	0.56	+0.4
2,970,065	-		GFF2907	0.56	-0.3
2,970,065	-		GFF2907	0.56	-0.5
2,970,065	-		GFF2907	0.56	-1.8
2,970,065	-		GFF2907	0.56	-1.1
2,970,065	-		GFF2907	0.56	-0.2
2,970,065	-		GFF2907	0.56	-2.1
2,970,065	-		GFF2907	0.56	-1.9
2,970,065	-		GFF2907	0.56	+0.5
2,970,065	-		GFF2907	0.56	+1.6
2,970,065	-		GFF2907	0.56	+0.6
2,970,065	-		GFF2907	0.56	+1.3
2,970,065	-		GFF2907	0.56	+1.3
2,970,065	-		GFF2907	0.56	-0.3
2,970,065	-		GFF2907	0.56	-0.6
2,970,065	-		GFF2907	0.56	-1.4
2,970,065	-		GFF2907	0.56	-0.4
2,970,065	-		GFF2907	0.56	-1.5
2,970,067	+		GFF2907	0.56	-0.8
2,970,067	+		GFF2907	0.56	-2.1
2,970,075	-		GFF2907	0.56	-1.5
2,970,075	-		GFF2907	0.56	-0.2
2,970,086	-		GFF2907	0.57	+0.2
2,970,089	+		GFF2907	0.58	-0.5
2,970,089	+		GFF2907	0.58	-0.1
2,970,089	+		GFF2907	0.58	-0.3
2,970,097	+		GFF2907	0.58	-1.4
2,970,099	+		GFF2907	0.58	-1.2
2,970,099	+		GFF2907	0.58	-0.1
2,970,107	+		GFF2907	0.59	-0.2
2,970,107	-		GFF2907	0.59	-0.4
2,970,139	+		GFF2907	0.61	-1.2
2,970,145	-		GFF2907	0.62	-1.4
2,970,158	+		GFF2907	0.63	-0.6
2,970,182	-		GFF2907	0.64	+0.1
2,970,210	-		GFF2907	0.67	+0.2
2,970,214	+		GFF2907	0.67	+0.6
2,970,214	+		GFF2907	0.67	-0.7
2,970,240	+		GFF2907	0.69	+0.6
2,970,240	+		GFF2907	0.69	+0.9
2,970,243	-		GFF2907	0.69	-0.9
2,970,248	-		GFF2907	0.69	-0.5
2,970,248	-		GFF2907	0.69	-1.8
2,970,265	-		GFF2907	0.71	-1.6
2,970,283	+		GFF2907	0.72	-0.4
2,970,291	-		GFF2907	0.73	-0.9
2,970,315	+		GFF2907	0.74	+0.5
2,970,317	+		GFF2907	0.74	-0.1
2,970,323	-		GFF2907	0.75	-0.5
2,970,323	-		GFF2907	0.75	-0.5
2,970,323	-		GFF2907	0.75	+1.2
2,970,371	+		GFF2907	0.78	+0.9
2,970,379	-		GFF2907	0.79	-1.2
2,970,379	-		GFF2907	0.79	-1.3
2,970,379	-		GFF2907	0.79	-0.1
2,970,410	-		GFF2907	0.81	+0.0
2,970,420	+		GFF2907	0.82	-1.8
2,970,462	-		GFF2907	0.85	+0.4
2,970,462	-		GFF2907	0.85	+0.1
2,970,477	+		GFF2907	0.86	+0.7
2,970,485	-		GFF2907	0.87	+0.6
2,970,487	+		GFF2907	0.87	-0.4
2,970,495	-		GFF2907	0.88	-1.5
2,970,495	-		GFF2907	0.88	+0.7
2,970,501	+		GFF2907	0.88	+0.5
2,970,539	+				-0.7
2,970,539	+				-1.4
2,970,539	+				+0.3
2,970,541	-				-0.6
2,970,547	-				-0.2
2,970,553	-				+0.6
2,970,562	+				+0.9
2,970,564	-				-0.5
2,970,567	+				+0.5
2,970,580	+				+0.8
2,970,580	+				-0.1
2,970,580	+				+1.2
2,970,580	+				-1.0
2,970,580	+				-1.2
2,970,580	+				-1.4
2,970,580	+				-0.7
2,970,580	+				-1.9
2,970,580	+				-0.2
2,970,580	+				-0.4
2,970,580	+				+0.8
2,970,580	+				-0.3
2,970,580	+				+0.2
2,970,585	+				-0.1
2,970,588	+				-0.3
2,970,588	+				+0.4
2,970,588	-				-1.2
2,970,588	-				-0.9
2,970,588	-				+0.0
2,970,588	-				-0.9
2,970,588	-				-0.5
2,970,588	-				-0.5
2,970,593	-				-1.4
2,970,598	-				-0.4
2,970,598	-				-0.5
2,970,598	-				+0.2
2,970,599	-				-2.4
2,970,606	+				-1.5
2,970,606	+				+0.7
2,970,606	+				+0.6
2,970,609	-				-2.0
2,970,614	-				+0.3
2,970,619	-				+0.4
2,970,619	-				-1.3
2,970,629	+				-1.3
2,970,648	+				+0.4
2,970,683	-				-1.9
2,970,714	+				-1.1
2,970,732	+				-1.4
2,970,739	-				-0.6
2,970,750	+		GFF2908	0.11	-0.5
2,970,763	+		GFF2908	0.13	-1.6
2,970,763	+		GFF2908	0.13	+0.6
2,970,763	+		GFF2908	0.13	-1.9
2,970,763	+		GFF2908	0.13	-0.2
2,970,763	+		GFF2908	0.13	-1.5
2,970,763	+		GFF2908	0.13	-0.3
2,970,763	+		GFF2908	0.13	-0.6
2,970,763	+		GFF2908	0.13	-2.8
2,970,763	+		GFF2908	0.13	-0.5
2,970,763	-		GFF2908	0.13	-0.6
2,970,765	+		GFF2908	0.13	-1.6
2,970,765	+		GFF2908	0.13	-0.3
2,970,765	+		GFF2908	0.13	-0.4
2,970,765	+		GFF2908	0.13	-0.4
2,970,771	-		GFF2908	0.13	-2.2
2,970,771	-		GFF2908	0.13	-0.8
2,970,771	-		GFF2908	0.13	+0.1
2,970,771	-		GFF2908	0.13	-0.9
2,970,771	-		GFF2908	0.13	-0.2
2,970,773	-		GFF2908	0.14	-0.5
2,970,773	-		GFF2908	0.14	-0.5
2,970,773	-		GFF2908	0.14	-0.8
2,970,786	-		GFF2908	0.15	-0.8
2,970,791	+		GFF2908	0.16	-1.2
2,970,791	+		GFF2908	0.16	-0.3
2,970,791	+		GFF2908	0.16	-1.5
2,970,799	-		GFF2908	0.17	-1.5
2,970,799	-		GFF2908	0.17	-0.5
2,970,820	+		GFF2908	0.19	-0.9
2,970,823	-		GFF2908	0.19	-0.9
2,970,828	-		GFF2908	0.20	+1.2
2,970,840	+		GFF2908	0.21	-1.5
2,970,840	+		GFF2908	0.21	-0.6
2,970,844	+		GFF2908	0.22	+0.3
2,970,844	+		GFF2908	0.22	+0.6
2,970,844	+		GFF2908	0.22	-2.5
2,970,848	-		GFF2908	0.22	-0.2
2,970,848	-		GFF2908	0.22	-0.0
2,970,848	-		GFF2908	0.22	-2.2
2,970,852	-		GFF2908	0.23	-1.7
2,970,852	-		GFF2908	0.23	+0.4
2,970,857	+		GFF2908	0.23	-1.9
2,970,860	-		GFF2908	0.24	-1.7
2,970,867	+		GFF2908	0.24	-1.2
2,970,867	+		GFF2908	0.24	-1.9
2,970,867	+		GFF2908	0.24	+0.4
2,970,867	+		GFF2908	0.24	-1.0
2,970,868	+		GFF2908	0.24	+0.0
2,970,868	+		GFF2908	0.24	-1.0
2,970,875	-		GFF2908	0.25	-0.6
2,970,875	-		GFF2908	0.25	-0.7
2,970,875	-		GFF2908	0.25	-0.8
2,970,875	-		GFF2908	0.25	-0.0
2,970,876	-		GFF2908	0.25	+2.2
2,970,877	-		GFF2908	0.25	-0.9
2,970,901	+		GFF2908	0.28	-0.6
2,970,909	-		GFF2908	0.29	-0.9
2,970,936	+		GFF2908	0.32	-0.6
2,970,942	+		GFF2908	0.33	-1.4
2,970,950	-		GFF2908	0.34	-1.0
2,970,960	+		GFF2908	0.35	+0.4
2,970,978	-		GFF2908	0.37	+0.7
2,970,978	-		GFF2908	0.37	-0.8
2,970,978	-		GFF2908	0.37	-0.8
2,970,978	-		GFF2908	0.37	-0.6
2,970,978	-		GFF2908	0.37	-0.7
2,970,985	+		GFF2908	0.38	-1.0
2,970,985	+		GFF2908	0.38	+0.2
2,970,985	+		GFF2908	0.38	-0.4
2,970,985	+		GFF2908	0.38	+1.0
2,970,989	+		GFF2908	0.38	-1.2
2,970,989	+		GFF2908	0.38	+0.4
2,970,993	-		GFF2908	0.39	+1.1
2,971,012	-		GFF2908	0.41	-0.4
2,971,034	-		GFF2908	0.43	+0.8
2,971,034	-		GFF2908	0.43	+0.8
2,971,040	-		GFF2908	0.44	-1.4
2,971,047	+		GFF2908	0.45	-1.4
2,971,047	+		GFF2908	0.45	-1.3
2,971,047	+		GFF2908	0.45	-0.6
2,971,062	+		GFF2908	0.46	+0.0
2,971,062	-		GFF2908	0.46	-0.6
2,971,064	-		GFF2908	0.47	-1.3
2,971,080	-		GFF2908	0.48	-0.3
2,971,113	-		GFF2908	0.52	-0.3
2,971,113	-		GFF2908	0.52	-1.6
2,971,144	+		GFF2908	0.56	-2.0
2,971,144	+		GFF2908	0.56	-0.7
2,971,146	+		GFF2908	0.56	-0.4
2,971,152	-		GFF2908	0.56	-1.3
2,971,152	-		GFF2908	0.56	-0.1
2,971,154	-		GFF2908	0.57	-0.7
2,971,173	+		GFF2908	0.59	-2.0
2,971,181	-		GFF2908	0.60	-0.4
2,971,192	+		GFF2908	0.61	-1.9
2,971,197	+		GFF2908	0.62	-1.4
2,971,197	+		GFF2908	0.62	-1.1
2,971,197	+		GFF2908	0.62	-1.5
2,971,200	-		GFF2908	0.62	-0.7
2,971,205	-		GFF2908	0.62	-2.1
2,971,205	-		GFF2908	0.62	-0.7
2,971,221	+		GFF2908	0.64	-0.9
2,971,224	+		GFF2908	0.65	-0.4
2,971,225	-		GFF2908	0.65	+0.8
2,971,229	-		GFF2908	0.65	+0.8
2,971,229	-		GFF2908	0.65	-1.2
2,971,229	-		GFF2908	0.65	+1.0
2,971,239	-		GFF2908	0.66	-0.5
2,971,239	-		GFF2908	0.66	-1.4
2,971,240	-		GFF2908	0.66	-2.1
2,971,242	+		GFF2908	0.67	+0.2
2,971,242	+		GFF2908	0.67	+0.7
2,971,242	+		GFF2908	0.67	-2.0
2,971,242	+		GFF2908	0.67	-0.5
2,971,242	+		GFF2908	0.67	-0.9
2,971,242	+		GFF2908	0.67	-0.2
2,971,242	+		GFF2908	0.67	-0.7
2,971,242	+		GFF2908	0.67	+0.6
2,971,250	-		GFF2908	0.68	-1.4
2,971,250	-		GFF2908	0.68	-1.0
2,971,250	-		GFF2908	0.68	+1.5
2,971,250	-		GFF2908	0.68	-1.7
2,971,250	-		GFF2908	0.68	+0.6
2,971,250	-		GFF2908	0.68	-1.6
2,971,250	-		GFF2908	0.68	-2.6
2,971,250	-		GFF2908	0.68	+0.1
2,971,300	+		GFF2908	0.73	+0.8
2,971,300	+		GFF2908	0.73	+1.4
2,971,300	+		GFF2908	0.73	-0.5
2,971,307	+		GFF2908	0.74	-0.3
2,971,307	+		GFF2908	0.74	+0.4
2,971,307	+		GFF2908	0.74	-0.8
2,971,307	+		GFF2908	0.74	+0.8
2,971,307	+		GFF2908	0.74	+0.6
2,971,308	-		GFF2908	0.74	-3.1
2,971,315	-		GFF2908	0.75	+1.6
2,971,318	+		GFF2908	0.75	+1.6
2,971,368	+		GFF2908	0.81	+0.5
2,971,368	+		GFF2908	0.81	+0.4
2,971,368	+		GFF2908	0.81	-1.1
2,971,376	-		GFF2908	0.82	-1.0
2,971,376	-		GFF2908	0.82	-1.1
2,971,376	-		GFF2908	0.82	-1.8
2,971,376	-		GFF2908	0.82	+0.5
2,971,379	+		GFF2908	0.82	-1.5
2,971,406	+		GFF2908	0.85	-0.2
2,971,406	+		GFF2908	0.85	+0.7
2,971,406	+		GFF2908	0.85	+0.4
2,971,406	+		GFF2908	0.85	+1.2
2,971,406	+		GFF2908	0.85	-2.2
2,971,406	-		GFF2908	0.85	+1.3
2,971,412	-		GFF2908	0.86	+0.2
2,971,412	-		GFF2908	0.86	+0.3
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