Strain Fitness in Sphingobium sp. HT1-2 around GFF2903

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,963,097	+		GFF2902	0.54	+0.7
2,963,230	+		GFF2902	0.63	-1.1
2,963,319	-		GFF2902	0.69	-0.4
2,963,359	+		GFF2902	0.72	+1.2
2,963,439	-		GFF2902	0.77	-0.7
2,963,470	+		GFF2902	0.79	-0.7
2,963,470	+		GFF2902	0.79	+0.1
2,963,475	+		GFF2902	0.79	-0.6
2,963,478	-		GFF2902	0.80	-1.6
2,963,478	-		GFF2902	0.80	-0.6
2,963,478	-		GFF2902	0.80	-0.5
2,963,480	+		GFF2902	0.80	+0.0
2,963,480	+		GFF2902	0.80	-0.3
2,963,480	+		GFF2902	0.80	-1.3
2,963,488	-		GFF2902	0.80	-1.0
2,963,502	+		GFF2902	0.81	+1.1
2,963,502	-		GFF2902	0.81	-0.6
2,963,525	-		GFF2902	0.83	-0.5
2,963,603	+		GFF2902	0.88	-0.4
2,963,609	+		GFF2902	0.88	-0.2
2,963,609	+		GFF2902	0.88	-1.8
2,963,617	-		GFF2902	0.89	-0.7
2,963,622	-		GFF2902	0.89	-0.5
2,963,633	-		GFF2902	0.90	+0.5
2,963,654	+				+0.1
2,963,654	+				+1.1
2,963,654	+				-0.6
2,963,662	-				-1.4
2,963,662	-				-0.4
2,963,662	-				-0.7
2,963,669	+				+0.7
2,963,669	+				+0.8
2,963,683	+				+0.7
2,963,683	+				-0.5
2,963,683	+				-1.0
2,963,683	+				-1.3
2,963,683	+				-0.4
2,963,691	-				-2.1
2,963,691	-				-1.2
2,963,691	-				-0.5
2,963,691	-				-0.5
2,963,699	+				+0.4
2,963,707	-				-1.2
2,963,742	+				+0.5
2,963,747	+				-1.5
2,963,755	+				-0.2
2,963,755	+				-0.3
2,963,839	+				+1.0
2,963,849	+				-0.5
2,963,849	+				-1.6
2,963,849	+				+0.2
2,963,849	+				-0.6
2,963,849	+				+0.1
2,963,850	+				-0.5
2,963,857	-				+0.5
2,963,857	-				-0.6
2,963,857	-				-1.2
2,963,867	+				+1.5
2,963,893	+				+0.8
2,963,893	+				-0.4
2,963,893	+				-0.8
2,963,893	+				+0.0
2,963,893	+				-1.0
2,963,893	+				-0.4
2,963,893	+				+0.9
2,963,901	-				+1.3
2,963,901	-				+1.1
2,963,901	-				-0.4
2,963,901	-				-0.3
2,963,901	-				-0.9
2,963,901	-				+0.0
2,963,901	-				+0.0
2,963,901	-				+0.3
2,963,901	-				-0.7
2,963,901	-				-0.2
2,963,919	+				+1.2
2,963,919	+				+0.8
2,963,919	+				+0.3
2,963,919	+				-0.4
2,963,919	+				-0.9
2,963,924	+				+1.1
2,963,925	+				+0.4
2,963,927	-				-1.4
2,963,932	-				-0.6
2,963,949	+				-0.7
2,963,952	-				+0.5
2,963,964	+				+0.6
2,963,964	+				-0.2
2,963,972	-				-2.0
2,963,972	-				-0.5
2,963,972	-				-0.4
2,964,002	-				-1.4
2,964,025	+				+1.2
2,964,027	-				-0.3
2,964,035	+				-0.7
2,964,035	-				+0.4
2,964,040	+				-0.9
2,964,047	+				-0.4
2,964,048	-				+0.2
2,964,055	-				-1.2
2,964,055	-				+0.5
2,964,087	-		GFF2903	0.11	-0.3
2,964,097	+		GFF2903	0.12	+1.2
2,964,114	-		GFF2903	0.13	-2.1
2,964,193	+		GFF2903	0.18	-1.1
2,964,195	+		GFF2903	0.18	-0.4
2,964,198	+		GFF2903	0.18	-0.2
2,964,200	+		GFF2903	0.18	+1.4
2,964,208	-		GFF2903	0.19	-1.6
2,964,217	+		GFF2903	0.19	-1.4
2,964,235	-		GFF2903	0.20	-1.5
2,964,241	+		GFF2903	0.21	-0.8
2,964,241	+		GFF2903	0.21	-1.1
2,964,249	-		GFF2903	0.21	-0.7
2,964,310	+		GFF2903	0.25	-0.5
2,964,324	-		GFF2903	0.26	+0.6
2,964,334	-		GFF2903	0.26	+1.3
2,964,362	+		GFF2903	0.28	-0.9
2,964,362	+		GFF2903	0.28	+0.5
2,964,364	-		GFF2903	0.28	+0.7
2,964,411	-		GFF2903	0.31	-0.5
2,964,460	+		GFF2903	0.34	+1.3
2,964,460	+		GFF2903	0.34	+0.2
2,964,460	+		GFF2903	0.34	+0.5
2,964,460	+		GFF2903	0.34	+0.0
2,964,465	+		GFF2903	0.34	-0.8
2,964,468	-		GFF2903	0.35	+1.0
2,964,468	-		GFF2903	0.35	-0.9
2,964,471	+		GFF2903	0.35	+0.4
2,964,471	+		GFF2903	0.35	-0.6
2,964,473	-		GFF2903	0.35	-1.4
2,964,504	-		GFF2903	0.37	-0.3
2,964,545	+		GFF2903	0.39	-0.5
2,964,560	-		GFF2903	0.40	-0.1
2,964,563	-		GFF2903	0.40	+0.0
2,964,565	+		GFF2903	0.41	-0.5
2,964,574	-		GFF2903	0.41	-0.4
2,964,575	+		GFF2903	0.41	+0.0
2,964,587	+		GFF2903	0.42	-0.4
2,964,589	+		GFF2903	0.42	+0.0
2,964,621	+		GFF2903	0.44	+1.9
2,964,621	+		GFF2903	0.44	-0.4
2,964,621	+		GFF2903	0.44	+0.0
2,964,622	+		GFF2903	0.44	-0.2
2,964,623	+		GFF2903	0.44	-1.2
2,964,628	+		GFF2903	0.44	-0.3
2,964,628	+		GFF2903	0.44	-1.0
2,964,629	-		GFF2903	0.44	+0.5
2,964,629	-		GFF2903	0.44	+0.1
2,964,629	-		GFF2903	0.44	-1.4
2,964,636	-		GFF2903	0.45	-0.4
2,964,636	-		GFF2903	0.45	-1.1
2,964,646	+		GFF2903	0.46	+0.4
2,964,667	+		GFF2903	0.47	+0.4
2,964,679	+		GFF2903	0.48	-0.4
2,964,707	+		GFF2903	0.49	-1.5
2,964,707	+		GFF2903	0.49	-0.4
2,964,707	+		GFF2903	0.49	-1.2
2,964,715	-		GFF2903	0.50	-0.4
2,964,720	-		GFF2903	0.50	+0.3
2,964,732	+		GFF2903	0.51	-0.0
2,964,742	-		GFF2903	0.51	+0.2
2,964,750	-		GFF2903	0.52	-2.2
2,964,769	+		GFF2903	0.53	-1.1
2,964,769	-		GFF2903	0.53	-0.5
2,964,777	-		GFF2903	0.54	-0.7
2,964,777	-		GFF2903	0.54	-0.4
2,964,782	-		GFF2903	0.54	-1.5
2,964,799	-		GFF2903	0.55	+0.1
2,964,801	+		GFF2903	0.55	-0.3
2,964,896	-		GFF2903	0.61	+0.4
2,964,903	+		GFF2903	0.61	-0.4
2,964,903	+		GFF2903	0.61	+0.7
2,964,903	+		GFF2903	0.61	+0.2
2,964,903	+		GFF2903	0.61	-0.4
2,964,903	+		GFF2903	0.61	-0.7
2,964,903	+		GFF2903	0.61	-1.4
2,964,903	+		GFF2903	0.61	-1.5
2,964,903	+		GFF2903	0.61	-0.6
2,964,903	+		GFF2903	0.61	-0.3
2,964,903	+		GFF2903	0.61	+1.1
2,964,903	+		GFF2903	0.61	+0.6
2,964,903	+		GFF2903	0.61	-0.6
2,964,911	-		GFF2903	0.62	-0.7
2,964,911	-		GFF2903	0.62	-0.7
2,964,911	-		GFF2903	0.62	-0.4
2,964,911	-		GFF2903	0.62	+0.4
2,964,911	-		GFF2903	0.62	-0.4
2,964,911	-		GFF2903	0.62	-1.7
2,964,918	+		GFF2903	0.62	-1.9
2,964,920	-		GFF2903	0.62	+1.2
2,964,926	-		GFF2903	0.63	-0.7
2,964,928	+		GFF2903	0.63	-0.8
2,964,928	+		GFF2903	0.63	-2.7
2,964,936	-		GFF2903	0.63	-1.9
2,964,936	-		GFF2903	0.63	+0.8
2,964,936	-		GFF2903	0.63	-0.2
2,964,948	+		GFF2903	0.64	-0.6
2,964,948	-		GFF2903	0.64	+0.4
2,964,949	-		GFF2903	0.64	-0.5
2,964,949	-		GFF2903	0.64	+0.2
2,964,963	-		GFF2903	0.65	-1.1
2,965,016	+		GFF2903	0.68	-2.0
2,965,030	+		GFF2903	0.69	-1.2
2,965,038	-		GFF2903	0.70	-1.3
2,965,052	+		GFF2903	0.70	+0.4
2,965,055	-		GFF2903	0.71	-0.4
2,965,060	-		GFF2903	0.71	-0.8
2,965,095	-		GFF2903	0.73	-1.8
2,965,101	+		GFF2903	0.73	+0.3
2,965,109	-		GFF2903	0.74	-1.5
2,965,109	-		GFF2903	0.74	-0.6
2,965,130	+		GFF2903	0.75	-0.4
2,965,130	+		GFF2903	0.75	-0.4
2,965,130	+		GFF2903	0.75	+0.0
2,965,130	+		GFF2903	0.75	-0.9
2,965,130	+		GFF2903	0.75	-0.9
2,965,138	-		GFF2903	0.76	-1.8
2,965,223	+		GFF2903	0.81	-0.6
2,965,237	+		GFF2903	0.82	-1.3
2,965,237	+		GFF2903	0.82	+0.6
2,965,237	+		GFF2903	0.82	-1.4
2,965,237	+		GFF2903	0.82	+0.6
2,965,237	+		GFF2903	0.82	-1.2
2,965,237	+		GFF2903	0.82	-0.7
2,965,237	+		GFF2903	0.82	-0.0
2,965,240	-		GFF2903	0.82	+0.9
2,965,243	+		GFF2903	0.82	-0.2
2,965,243	+		GFF2903	0.82	+0.7
2,965,245	-		GFF2903	0.82	-1.2
2,965,245	-		GFF2903	0.82	-1.0
2,965,245	-		GFF2903	0.82	-1.6
2,965,245	-		GFF2903	0.82	-0.2
2,965,245	-		GFF2903	0.82	-1.2
2,965,245	-		GFF2903	0.82	-1.2
2,965,245	-		GFF2903	0.82	-1.0
2,965,245	-		GFF2903	0.82	+0.7
2,965,251	-		GFF2903	0.83	-0.6
2,965,251	-		GFF2903	0.83	+0.4
2,965,271	-		GFF2903	0.84	-0.3
2,965,273	+		GFF2903	0.84	-0.7
2,965,273	+		GFF2903	0.84	+1.3
2,965,273	+		GFF2903	0.84	+1.1
2,965,273	+		GFF2903	0.84	+0.1
2,965,273	+		GFF2903	0.84	-0.2
2,965,273	+		GFF2903	0.84	-1.5
2,965,273	+		GFF2903	0.84	-1.4
2,965,273	+		GFF2903	0.84	-1.4
2,965,273	+		GFF2903	0.84	-0.6
2,965,273	+		GFF2903	0.84	+1.8
2,965,273	+		GFF2903	0.84	-0.6
2,965,273	+		GFF2903	0.84	+0.2
2,965,273	+		GFF2903	0.84	-0.6
2,965,273	+		GFF2903	0.84	-0.7
2,965,273	+		GFF2903	0.84	-1.0
2,965,273	+		GFF2903	0.84	+1.6
2,965,273	+		GFF2903	0.84	-0.5
2,965,273	+		GFF2903	0.84	-0.8
2,965,273	+		GFF2903	0.84	-2.0
2,965,273	+		GFF2903	0.84	+0.0
2,965,273	+		GFF2903	0.84	+0.5
2,965,281	-		GFF2903	0.84	+1.6
2,965,281	-		GFF2903	0.84	-0.4
2,965,281	-		GFF2903	0.84	-0.3
2,965,281	-		GFF2903	0.84	-1.3
2,965,281	-		GFF2903	0.84	-1.0
2,965,281	-		GFF2903	0.84	+0.3
2,965,281	-		GFF2903	0.84	+1.3
2,965,281	-		GFF2903	0.84	-0.5
2,965,281	-		GFF2903	0.84	-1.6
2,965,281	-		GFF2903	0.84	-0.7
2,965,281	-		GFF2903	0.84	+1.4
2,965,281	-		GFF2903	0.84	-0.1
2,965,281	-		GFF2903	0.84	-1.1
2,965,281	-		GFF2903	0.84	-0.3
2,965,281	-		GFF2903	0.84	-0.8
2,965,281	-		GFF2903	0.84	-1.6
2,965,281	-		GFF2903	0.84	-0.6
2,965,281	-		GFF2903	0.84	+0.3
2,965,281	-		GFF2903	0.84	+0.8
2,965,281	-		GFF2903	0.84	-1.3
2,965,281	-		GFF2903	0.84	-0.5
2,965,281	-		GFF2903	0.84	+0.4
2,965,281	-		GFF2903	0.84	-1.4
2,965,284	+		GFF2903	0.85	-1.8
2,965,284	+		GFF2903	0.85	-0.9
2,965,284	+		GFF2903	0.85	+0.4
2,965,284	+		GFF2903	0.85	-1.0
2,965,284	+		GFF2903	0.85	-1.1
2,965,284	+		GFF2903	0.85	+1.7
2,965,287	-		GFF2903	0.85	+0.5
2,965,287	-		GFF2903	0.85	-1.0
2,965,287	-		GFF2903	0.85	-0.4
2,965,287	-		GFF2903	0.85	+0.6
2,965,287	-		GFF2903	0.85	-1.8
2,965,292	-		GFF2903	0.85	+1.5
2,965,292	-		GFF2903	0.85	-2.0
2,965,313	+		GFF2903	0.86	-0.9
2,965,318	+		GFF2903	0.87	+0.1
2,965,323	+		GFF2903	0.87	-0.1
2,965,326	-		GFF2903	0.87	+1.1
2,965,357	+		GFF2903	0.89	-0.4
2,965,357	+		GFF2903	0.89	-1.8
2,965,400	+				-2.4
2,965,428	+				+1.2
2,965,428	+				-0.5
2,965,433	+				-1.2
2,965,433	+				+0.8
2,965,433	+				-0.1
2,965,436	-				-0.8
2,965,436	-				+0.1
2,965,441	-				+0.6
2,965,441	-				-0.2
2,965,441	-				-0.2
2,965,446	-				+0.1
2,965,451	-				-0.2
2,965,501	+				+1.1
2,965,511	+				-0.8
2,965,511	+				-0.7
2,965,511	+				-1.0
2,965,511	+				-1.0
2,965,511	+				-1.0
2,965,511	+				-0.4
2,965,511	+				-0.5
2,965,519	-				+0.7
2,965,519	-				-1.4
2,965,519	-				+0.5
2,965,519	-				-0.8
2,965,519	-				+0.4
2,965,519	-				-0.2
2,965,525	+				-1.9
2,965,525	+				-0.6
2,965,533	-				+1.2
2,965,533	-				+1.1
2,965,535	+				+0.2
2,965,599	+				-1.5
2,965,599	+				-2.2
2,965,599	+				+0.9
2,965,605	+				-0.2
2,965,605	+				+0.3
2,965,607	-				+0.6
2,965,613	-				-0.4
2,965,613	-				+0.5
2,965,613	-				-0.8
2,965,613	-				+0.4
2,965,625	-				-1.0
2,965,630	+				-0.4
2,965,630	-				-0.5
2,965,687	-				-0.7
2,965,709	+				-0.0
2,965,709	+				-0.5
2,965,709	+				-0.6
2,965,712	+				-0.9
2,965,712	-				-1.7
2,965,712	-				-1.2
2,965,717	+				+0.1
2,965,717	-				-1.1
2,965,717	-				-0.5
2,965,717	-				+1.2
2,965,717	-				+1.1
2,965,717	-				+0.6
2,965,722	-				-0.8
2,965,738	-				-1.0
2,965,739	+				-0.9
2,965,742	+				-1.5
2,965,742	+				+0.8
2,965,747	-				-0.9
2,965,750	-				+0.0
2,965,750	-				-0.2
2,965,766	+		GFF2904	0.11	-0.8
2,965,781	-		GFF2904	0.12	-0.5
2,965,796	-		GFF2904	0.13	+1.5
2,965,798	-		GFF2904	0.14	-0.7
2,965,798	-		GFF2904	0.14	-1.1
2,965,798	-		GFF2904	0.14	+0.0
2,965,799	+		GFF2904	0.14	-0.6
2,965,817	-		GFF2904	0.15	+0.3
2,965,817	-		GFF2904	0.15	-1.7
2,965,822	-		GFF2904	0.15	-0.2
2,965,826	-		GFF2904	0.16	-0.8
2,965,904	+		GFF2904	0.22	+0.4
2,965,923	+		GFF2904	0.23	-0.6
2,965,923	+		GFF2904	0.23	-0.9
2,965,923	+		GFF2904	0.23	-0.7
2,965,923	+		GFF2904	0.23	-1.1
2,965,931	-		GFF2904	0.24	+0.6
2,965,931	-		GFF2904	0.24	-0.8
2,965,941	+		GFF2904	0.25	+0.1
2,965,947	+		GFF2904	0.25	-2.0
2,965,955	-		GFF2904	0.26	+0.1
2,965,959	-		GFF2904	0.26	+0.1
2,965,959	-		GFF2904	0.26	+0.1
2,966,018	+		GFF2904	0.30	-1.4
2,966,019	+		GFF2904	0.31	-0.3
2,966,027	-		GFF2904	0.31	+0.7
2,966,041	+		GFF2904	0.32	-1.2
2,966,041	+		GFF2904	0.32	-1.1
2,966,049	-		GFF2904	0.33	+0.4
2,966,049	-		GFF2904	0.33	+0.7
2,966,049	-		GFF2904	0.33	-0.7
2,966,081	+		GFF2904	0.35	+0.3
2,966,081	+		GFF2904	0.35	-1.4
2,966,081	+		GFF2904	0.35	+0.6
2,966,081	+		GFF2904	0.35	+0.7
2,966,081	+		GFF2904	0.35	+2.0
2,966,081	+		GFF2904	0.35	-2.0
2,966,089	-		GFF2904	0.36	-0.7
2,966,104	+		GFF2904	0.37	-0.3
2,966,112	-		GFF2904	0.38	-2.0
2,966,134	+		GFF2904	0.39	-0.2
2,966,142	-		GFF2904	0.40	-1.0
2,966,142	-		GFF2904	0.40	-0.5
2,966,144	+		GFF2904	0.40	+0.0
2,966,145	+		GFF2904	0.40	+0.1
2,966,145	+		GFF2904	0.40	-2.4
2,966,145	+		GFF2904	0.40	-0.6
2,966,153	-		GFF2904	0.41	-1.1
2,966,153	-		GFF2904	0.41	-1.1
2,966,161	+		GFF2904	0.41	-1.6
2,966,161	+		GFF2904	0.41	-0.9
2,966,161	+		GFF2904	0.41	-0.9
2,966,169	-		GFF2904	0.42	-0.4
2,966,169	-		GFF2904	0.42	-1.3
2,966,171	+		GFF2904	0.42	-1.4
2,966,178	+		GFF2904	0.43	+0.2
2,966,186	-		GFF2904	0.43	+1.2
2,966,186	-		GFF2904	0.43	+0.2
2,966,188	+		GFF2904	0.44	-1.0
2,966,188	+		GFF2904	0.44	-1.5
2,966,188	+		GFF2904	0.44	-0.4
2,966,191	-		GFF2904	0.44	-1.0
2,966,191	-		GFF2904	0.44	-0.7
2,966,218	+		GFF2904	0.46	-0.4
2,966,271	+		GFF2904	0.50	-0.1
2,966,278	+		GFF2904	0.50	-2.1
2,966,286	+		GFF2904	0.51	-0.3
2,966,288	+		GFF2904	0.51	+1.1
2,966,288	+		GFF2904	0.51	+0.7
2,966,296	-		GFF2904	0.52	-1.2
2,966,296	-		GFF2904	0.52	+0.5
2,966,323	+		GFF2904	0.54	-0.4
2,966,323	+		GFF2904	0.54	-0.5
2,966,323	+		GFF2904	0.54	-1.2
2,966,323	+		GFF2904	0.54	-0.5
2,966,323	+		GFF2904	0.54	-0.9
2,966,323	+		GFF2904	0.54	+0.7
2,966,323	+		GFF2904	0.54	-1.1
2,966,323	+		GFF2904	0.54	+0.7
2,966,323	+		GFF2904	0.54	-0.3
2,966,331	-		GFF2904	0.54	+0.3
2,966,331	-		GFF2904	0.54	+0.8
2,966,331	-		GFF2904	0.54	-0.5
2,966,331	-		GFF2904	0.54	-0.0
2,966,333	+		GFF2904	0.55	-1.2
2,966,333	+		GFF2904	0.55	-0.4
2,966,335	-		GFF2904	0.55	+0.0
2,966,335	-		GFF2904	0.55	-0.8
2,966,340	+		GFF2904	0.55	+0.2
2,966,341	-		GFF2904	0.55	+0.7
2,966,346	-		GFF2904	0.56	-0.9
2,966,353	+		GFF2904	0.56	+0.7
2,966,361	-		GFF2904	0.57	+0.2
2,966,361	-		GFF2904	0.57	+0.7
2,966,379	+		GFF2904	0.58	+0.1
2,966,390	+		GFF2904	0.59	-0.5
2,966,391	+		GFF2904	0.59	-0.8
2,966,438	+		GFF2904	0.63	-1.2
2,966,446	-		GFF2904	0.63	-0.5
2,966,468	-		GFF2904	0.65	-0.3
2,966,470	+		GFF2904	0.65	-1.0
2,966,470	+		GFF2904	0.65	-0.7
2,966,470	-		GFF2904	0.65	-0.3
2,966,515	+		GFF2904	0.69	+0.2
2,966,532	-		GFF2904	0.70	-1.0