Strain Fitness in Sphingobium sp. HT1-2 around GFF2826

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,868,464	+		GFF2825	0.58	+1.2
2,868,470	+		GFF2825	0.58	+0.9
2,868,470	+		GFF2825	0.58	-0.4
2,868,471	+		GFF2825	0.58	+0.1
2,868,486	+		GFF2825	0.59	-0.7
2,868,521	+		GFF2825	0.60	+2.5
2,868,525	+		GFF2825	0.61	-0.7
2,868,538	+		GFF2825	0.61	+1.4
2,868,539	-		GFF2825	0.61	-0.3
2,868,553	+		GFF2825	0.62	-0.3
2,868,553	+		GFF2825	0.62	-0.6
2,868,553	+		GFF2825	0.62	+0.1
2,868,561	-		GFF2825	0.62	+0.1
2,868,561	-		GFF2825	0.62	+0.4
2,868,561	-		GFF2825	0.62	+0.7
2,868,561	-		GFF2825	0.62	+1.2
2,868,587	-		GFF2825	0.63	-1.5
2,868,594	+		GFF2825	0.63	-1.7
2,868,594	+		GFF2825	0.63	-0.9
2,868,594	+		GFF2825	0.63	-1.0
2,868,594	+		GFF2825	0.63	-1.1
2,868,602	-		GFF2825	0.64	+0.6
2,868,611	+		GFF2825	0.64	-1.2
2,868,637	+		GFF2825	0.65	-0.4
2,868,637	+		GFF2825	0.65	-0.9
2,868,681	+		GFF2825	0.67	-1.4
2,868,689	-		GFF2825	0.68	-0.3
2,868,689	-		GFF2825	0.68	-0.2
2,868,689	-		GFF2825	0.68	+1.7
2,868,696	+		GFF2825	0.68	-2.1
2,868,701	+		GFF2825	0.68	-0.2
2,868,701	+		GFF2825	0.68	-1.2
2,868,704	-		GFF2825	0.68	-1.7
2,868,706	+		GFF2825	0.68	-0.4
2,868,734	+		GFF2825	0.69	-1.7
2,868,734	+		GFF2825	0.69	-0.6
2,868,739	+		GFF2825	0.70	-1.0
2,868,739	+		GFF2825	0.70	+0.6
2,868,744	+		GFF2825	0.70	+0.2
2,868,747	-		GFF2825	0.70	-1.6
2,868,747	-		GFF2825	0.70	+0.4
2,868,761	-		GFF2825	0.71	+1.1
2,868,763	+		GFF2825	0.71	-1.3
2,868,774	+		GFF2825	0.71	-0.3
2,868,776	+		GFF2825	0.71	-1.1
2,868,782	-		GFF2825	0.72	+0.6
2,868,782	-		GFF2825	0.72	+0.7
2,868,782	-		GFF2825	0.72	+0.7
2,868,782	-		GFF2825	0.72	+1.2
2,868,782	-		GFF2825	0.72	+0.0
2,868,784	-		GFF2825	0.72	+0.3
2,868,784	-		GFF2825	0.72	+0.2
2,868,788	-		GFF2825	0.72	+0.7
2,868,788	-		GFF2825	0.72	-0.1
2,868,795	+		GFF2825	0.72	+0.3
2,868,810	+		GFF2825	0.73	+0.3
2,868,810	+		GFF2825	0.73	+0.5
2,868,810	+		GFF2825	0.73	-0.9
2,868,818	-		GFF2825	0.73	-0.2
2,868,818	-		GFF2825	0.73	-0.6
2,868,818	-		GFF2825	0.73	-1.1
2,868,818	-		GFF2825	0.73	-0.3
2,868,818	-		GFF2825	0.73	-0.7
2,868,836	-		GFF2825	0.74	-0.2
2,868,861	+		GFF2825	0.75	+2.4
2,868,865	+		GFF2825	0.75	+1.0
2,868,874	-		GFF2825	0.75	-1.8
2,868,879	+		GFF2825	0.76	-0.3
2,868,887	-		GFF2825	0.76	-0.7
2,868,887	-		GFF2825	0.76	+0.3
2,868,887	-		GFF2825	0.76	+2.3
2,868,887	-		GFF2825	0.76	+2.7
2,868,892	-		GFF2825	0.76	-0.1
2,868,902	-		GFF2825	0.77	-0.1
2,868,905	+		GFF2825	0.77	+0.1
2,868,932	+		GFF2825	0.78	-0.5
2,868,933	+		GFF2825	0.78	-0.9
2,868,942	-		GFF2825	0.78	-1.5
2,868,967	+		GFF2825	0.79	+0.5
2,868,975	-		GFF2825	0.80	-1.0
2,868,987	+		GFF2825	0.80	+0.2
2,868,987	+		GFF2825	0.80	-1.3
2,868,987	+		GFF2825	0.80	+0.3
2,868,987	+		GFF2825	0.80	-0.9
2,868,987	+		GFF2825	0.80	-0.1
2,868,987	+		GFF2825	0.80	-1.3
2,868,987	+		GFF2825	0.80	+0.1
2,868,987	+		GFF2825	0.80	+0.4
2,868,987	+		GFF2825	0.80	+0.8
2,868,987	+		GFF2825	0.80	+0.6
2,868,995	+		GFF2825	0.81	+1.1
2,868,995	-		GFF2825	0.81	+1.5
2,868,995	-		GFF2825	0.81	+1.2
2,868,995	-		GFF2825	0.81	-0.2
2,868,995	-		GFF2825	0.81	-0.3
2,868,995	-		GFF2825	0.81	-0.6
2,868,995	-		GFF2825	0.81	+0.2
2,868,995	-		GFF2825	0.81	-1.5
2,869,003	-		GFF2825	0.81	-0.4
2,869,003	-		GFF2825	0.81	-0.9
2,869,015	+		GFF2825	0.81	+0.4
2,869,033	-		GFF2825	0.82	-1.9
2,869,060	+		GFF2825	0.83	+0.2
2,869,060	+		GFF2825	0.83	-0.5
2,869,060	+		GFF2825	0.83	-1.5
2,869,060	+		GFF2825	0.83	-1.0
2,869,060	+		GFF2825	0.83	-0.8
2,869,061	+		GFF2825	0.83	-0.8
2,869,068	-		GFF2825	0.84	-0.8
2,869,068	-		GFF2825	0.84	+0.4
2,869,068	-		GFF2825	0.84	-1.1
2,869,074	-		GFF2825	0.84	+0.4
2,869,082	-		GFF2825	0.84	+1.0
2,869,215	+				+1.3
2,869,228	-				-0.6
2,869,230	+				+0.9
2,869,230	-				+0.7
2,869,230	-				-0.5
2,869,236	-				-0.6
2,869,255	-				-0.1
2,869,255	-				-0.7
2,869,255	-				+0.1
2,869,287	+				-0.9
2,869,295	-				+1.5
2,869,316	+				-1.2
2,869,349	+				+1.8
2,869,352	-				+0.1
2,869,353	-				-0.3
2,869,353	-				-1.4
2,869,354	+				+0.4
2,869,354	+				-1.9
2,869,354	+				-1.3
2,869,354	+				-0.8
2,869,362	-				-0.8
2,869,362	-				+0.0
2,869,377	-				-0.8
2,869,377	-				-0.6
2,869,377	-				-1.3
2,869,397	-				+0.8
2,869,402	-				+0.5
2,869,422	+				+0.2
2,869,434	-				-1.5
2,869,489	+				-1.7
2,869,496	-				+0.6
2,869,516	+				-0.5
2,869,516	+				-0.4
2,869,578	+				-1.3
2,869,578	+				+2.3
2,869,578	+				+1.1
2,869,586	-				+0.6
2,869,591	-				-1.7
2,869,611	+		GFF2826	0.10	-0.0
2,869,611	+		GFF2826	0.10	+1.8
2,869,611	+		GFF2826	0.10	-1.1
2,869,619	-		GFF2826	0.11	-0.8
2,869,750	+		GFF2826	0.20	-0.2
2,869,757	-		GFF2826	0.20	-1.2
2,869,789	-		GFF2826	0.22	+1.2
2,869,796	+		GFF2826	0.23	+0.1
2,869,796	+		GFF2826	0.23	+0.1
2,869,829	-		GFF2826	0.25	-0.2
2,869,845	+		GFF2826	0.26	+0.5
2,869,864	-		GFF2826	0.28	+1.7
2,869,869	+		GFF2826	0.28	-0.0
2,869,869	+		GFF2826	0.28	+1.0
2,869,869	+		GFF2826	0.28	-0.0
2,869,869	+		GFF2826	0.28	-2.2
2,869,877	-		GFF2826	0.28	+0.1
2,869,877	-		GFF2826	0.28	-1.5
2,869,877	-		GFF2826	0.28	-0.0
2,869,879	+		GFF2826	0.29	-0.6
2,869,879	+		GFF2826	0.29	-1.0
2,869,912	-		GFF2826	0.31	+0.4
2,869,921	+		GFF2826	0.31	+1.0
2,869,929	-		GFF2826	0.32	+1.0
2,869,929	-		GFF2826	0.32	+0.4
2,869,940	+		GFF2826	0.33	+1.5
2,869,947	+		GFF2826	0.33	+0.7
2,869,947	+		GFF2826	0.33	-0.2
2,869,947	+		GFF2826	0.33	-1.3
2,869,952	+		GFF2826	0.34	+0.5
2,869,955	-		GFF2826	0.34	+0.5
2,869,955	-		GFF2826	0.34	+1.5
2,869,962	-		GFF2826	0.34	+0.3
2,869,992	+		GFF2826	0.36	+0.4
2,870,000	-		GFF2826	0.37	-0.4
2,870,015	+		GFF2826	0.38	-0.4
2,870,062	-		GFF2826	0.41	+1.3
2,870,090	+		GFF2826	0.43	+1.5
2,870,098	-		GFF2826	0.44	-0.3
2,870,121	+		GFF2826	0.45	+1.8
2,870,121	+		GFF2826	0.45	-0.7
2,870,121	+		GFF2826	0.45	+1.5
2,870,129	-		GFF2826	0.46	-1.0
2,870,174	+		GFF2826	0.49	-1.0
2,870,174	+		GFF2826	0.49	-0.6
2,870,181	+		GFF2826	0.49	-0.1
2,870,181	+		GFF2826	0.49	-0.6
2,870,181	+		GFF2826	0.49	+1.0
2,870,189	-		GFF2826	0.50	-0.0
2,870,224	-		GFF2826	0.52	+0.6
2,870,228	+		GFF2826	0.52	+0.5
2,870,228	+		GFF2826	0.52	+1.4
2,870,252	+		GFF2826	0.54	-0.6
2,870,285	+		GFF2826	0.56	-0.3
2,870,295	+		GFF2826	0.57	+0.3
2,870,297	+		GFF2826	0.57	-0.5
2,870,297	+		GFF2826	0.57	-0.5
2,870,305	-		GFF2826	0.58	+1.1
2,870,305	-		GFF2826	0.58	-0.3
2,870,305	-		GFF2826	0.58	-0.1
2,870,362	+		GFF2826	0.62	-0.7
2,870,368	+		GFF2826	0.62	+1.4
2,870,381	+		GFF2826	0.63	-0.1
2,870,381	+		GFF2826	0.63	+1.2
2,870,381	+		GFF2826	0.63	+1.2
2,870,381	+		GFF2826	0.63	-0.0
2,870,381	+		GFF2826	0.63	-0.2
2,870,381	+		GFF2826	0.63	-0.0
2,870,381	+		GFF2826	0.63	-0.2
2,870,381	+		GFF2826	0.63	-0.9
2,870,381	+		GFF2826	0.63	+0.6
2,870,381	+		GFF2826	0.63	-0.4
2,870,381	+		GFF2826	0.63	-1.5
2,870,381	+		GFF2826	0.63	+0.6
2,870,381	+		GFF2826	0.63	+0.1
2,870,381	+		GFF2826	0.63	-0.2
2,870,381	+		GFF2826	0.63	+0.5
2,870,381	+		GFF2826	0.63	+0.7
2,870,381	+		GFF2826	0.63	-0.7
2,870,381	+		GFF2826	0.63	-0.2
2,870,381	+		GFF2826	0.63	-0.2
2,870,381	+		GFF2826	0.63	+0.1
2,870,389	-		GFF2826	0.63	+1.1
2,870,389	-		GFF2826	0.63	+0.4
2,870,389	-		GFF2826	0.63	+0.5
2,870,389	-		GFF2826	0.63	+1.5
2,870,389	-		GFF2826	0.63	+0.1
2,870,389	-		GFF2826	0.63	+0.1
2,870,389	-		GFF2826	0.63	-0.2
2,870,389	-		GFF2826	0.63	-0.6
2,870,389	-		GFF2826	0.63	-0.7
2,870,389	-		GFF2826	0.63	-0.5
2,870,389	-		GFF2826	0.63	+0.7
2,870,389	-		GFF2826	0.63	+0.7
2,870,389	-		GFF2826	0.63	+0.2
2,870,389	-		GFF2826	0.63	+0.3
2,870,389	-		GFF2826	0.63	-1.1
2,870,389	-		GFF2826	0.63	-0.2
2,870,389	-		GFF2826	0.63	-1.3
2,870,389	-		GFF2826	0.63	+0.9
2,870,389	-		GFF2826	0.63	-1.2
2,870,389	-		GFF2826	0.63	-0.2
2,870,389	-		GFF2826	0.63	-1.4
2,870,389	-		GFF2826	0.63	-0.3
2,870,399	+		GFF2826	0.64	-1.5
2,870,399	+		GFF2826	0.64	-0.9
2,870,399	+		GFF2826	0.64	+0.2
2,870,407	-		GFF2826	0.65	-0.8
2,870,407	-		GFF2826	0.65	+1.1
2,870,407	-		GFF2826	0.65	+0.4
2,870,407	-		GFF2826	0.65	+1.0
2,870,413	+		GFF2826	0.65	+0.2
2,870,426	-		GFF2826	0.66	-0.5
2,870,426	-		GFF2826	0.66	+1.0
2,870,456	+		GFF2826	0.68	-1.6
2,870,464	-		GFF2826	0.69	-1.1
2,870,473	-		GFF2826	0.69	+0.8
2,870,473	-		GFF2826	0.69	-0.7
2,870,473	-		GFF2826	0.69	-1.4
2,870,511	+		GFF2826	0.72	-0.5
2,870,519	-		GFF2826	0.72	+2.1
2,870,519	-		GFF2826	0.72	-0.2
2,870,529	-		GFF2826	0.73	-1.5
2,870,538	+		GFF2826	0.74	+0.2
2,870,544	+		GFF2826	0.74	-1.7
2,870,552	-		GFF2826	0.75	+0.4
2,870,556	-		GFF2826	0.75	-1.2
2,870,562	-		GFF2826	0.75	-0.6
2,870,563	-		GFF2826	0.75	-0.0
2,870,566	+		GFF2826	0.75	-0.5
2,870,632	-		GFF2826	0.80	+0.8
2,870,652	+		GFF2826	0.81	-1.6
2,870,657	+		GFF2826	0.82	+0.5
2,870,681	+		GFF2826	0.83	-0.9
2,870,681	+		GFF2826	0.83	-0.5
2,870,681	+		GFF2826	0.83	-0.4
2,870,682	+		GFF2826	0.83	+0.4
2,870,684	+		GFF2826	0.84	-0.4
2,870,684	+		GFF2826	0.84	+0.0
2,870,684	+		GFF2826	0.84	-0.2
2,870,690	-		GFF2826	0.84	-0.8
2,870,692	-		GFF2826	0.84	-2.1
2,870,701	+		GFF2826	0.85	+1.0
2,870,727	+		GFF2826	0.86	-1.2
2,870,746	+		GFF2826	0.88	-0.4
2,870,765	+		GFF2826	0.89	-2.6
2,870,765	+		GFF2826	0.89	-1.8
2,870,773	-		GFF2826	0.90	+1.1
2,870,773	-		GFF2826	0.90	+3.5
2,870,773	-		GFF2826	0.90	+1.4
2,870,813	-				+0.7
2,870,815	+				+0.2
2,870,815	+				-0.4
2,870,817	+				-0.8
2,870,817	+				-1.9
2,870,818	-				-1.5
2,870,823	-				+0.0
2,870,825	+				-1.9
2,870,833	-				-2.4
2,870,838	-				-0.0
2,870,842	-				+1.3
2,870,868	+				+0.5
2,870,868	+				-1.5
2,870,868	+				+0.7
2,870,873	+				+1.0
2,870,873	+				+0.5
2,870,873	+				+0.3
2,870,874	-				-0.3
2,870,876	-				-0.1
2,870,881	-				-1.6
2,870,881	-				-1.0
2,870,908	-				-1.8
2,870,926	-				-0.6
2,870,926	-				-0.2
2,870,933	-				-1.3
2,871,042	-				-0.6
2,871,051	+				-0.6
2,871,052	-				-0.5
2,871,059	-				-0.6
2,871,069	-				-0.8
2,871,075	-				-0.0
2,871,093	+				+0.4
2,871,093	+				-0.3
2,871,093	+				-1.2
2,871,093	+				-1.5
2,871,101	-				+0.9
2,871,101	-				+0.7
2,871,101	-				+0.2
2,871,116	+				+1.7
2,871,131	+				+0.4
2,871,131	+				-0.6
2,871,131	+				+0.3
2,871,131	+				-0.7
2,871,131	+				-0.2
2,871,131	+				-0.4
2,871,134	-				-0.6
2,871,134	-				-0.7
2,871,139	-				+0.8
2,871,139	-				+0.4
2,871,139	-				+0.1
2,871,141	-				+0.7
2,871,168	+				-0.8
2,871,168	+				+0.3
2,871,176	-				+0.4
2,871,221	-				+2.1
2,871,236	+				+0.3
2,871,253	-		GFF2827	0.11	+0.3
2,871,345	+		GFF2827	0.16	+1.7
2,871,345	+		GFF2827	0.16	+0.2
2,871,363	-		GFF2827	0.17	-1.2
2,871,386	+		GFF2827	0.18	+0.7
2,871,394	-		GFF2827	0.19	-3.0
2,871,394	-		GFF2827	0.19	-1.4
2,871,396	+		GFF2827	0.19	+1.3
2,871,396	+		GFF2827	0.19	-0.4
2,871,400	-		GFF2827	0.19	-0.4
2,871,423	+		GFF2827	0.21	-0.6
2,871,429	+		GFF2827	0.21	-0.5
2,871,430	+		GFF2827	0.21	+1.1
2,871,472	-		GFF2827	0.24	+0.6
2,871,488	+		GFF2827	0.25	+0.5
2,871,550	+		GFF2827	0.28	+1.5
2,871,567	-		GFF2827	0.29	-0.3
2,871,579	+		GFF2827	0.30	+2.1
2,871,587	-		GFF2827	0.30	+0.4
2,871,587	-		GFF2827	0.30	-0.4
2,871,602	-		GFF2827	0.31	-0.8
2,871,660	-		GFF2827	0.35	-0.7
2,871,740	+		GFF2827	0.40	-1.4
2,871,740	+		GFF2827	0.40	+1.2
2,871,746	+		GFF2827	0.40	-1.4
2,871,749	+		GFF2827	0.40	+0.2
2,871,757	+		GFF2827	0.41	-0.2
2,871,779	-		GFF2827	0.42	-1.5
2,871,779	-		GFF2827	0.42	-1.1
2,871,810	-		GFF2827	0.44	-0.5
2,871,810	-		GFF2827	0.44	-0.7
2,871,819	+		GFF2827	0.44	+2.0
2,871,846	+		GFF2827	0.46	-0.0