Strain Fitness in Sphingobium sp. HT1-2 around GFF2781

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,815,469	+				-0.4
2,815,477	-				-0.3
2,815,480	+				-0.4
2,815,482	+				-0.6
2,815,490	-				-0.3
2,815,514	+				-1.7
2,815,514	+				-1.1
2,815,514	+				-2.5
2,815,514	+				-1.0
2,815,514	+				-1.3
2,815,514	+				-0.4
2,815,514	+				-1.1
2,815,516	+				+0.6
2,815,522	-				-1.3
2,815,522	-				-1.3
2,815,522	-				-1.2
2,815,522	-				-0.8
2,815,522	-				-1.5
2,815,522	-				+0.3
2,815,522	-				-0.1
2,815,522	-				-0.5
2,815,522	-				-1.5
2,815,522	-				-0.9
2,815,522	-				-0.6
2,815,532	-				-1.1
2,815,556	-				-1.5
2,815,575	+				+1.0
2,815,575	+				-1.6
2,815,585	+				+0.3
2,815,588	+		GFF2780	0.10	-1.9
2,815,594	+		GFF2780	0.11	-1.9
2,815,596	-		GFF2780	0.11	-1.5
2,815,601	+		GFF2780	0.12	+1.1
2,815,602	-		GFF2780	0.12	+0.9
2,815,617	+		GFF2780	0.14	+1.0
2,815,620	-		GFF2780	0.14	-0.5
2,815,642	+		GFF2780	0.17	-0.6
2,815,642	+		GFF2780	0.17	-0.5
2,815,644	-		GFF2780	0.17	+0.6
2,815,691	-		GFF2780	0.22	+0.8
2,815,693	+		GFF2780	0.22	-0.9
2,815,696	-		GFF2780	0.23	+1.9
2,815,696	-		GFF2780	0.23	-1.6
2,815,696	-		GFF2780	0.23	-1.1
2,815,696	-		GFF2780	0.23	-2.3
2,815,701	-		GFF2780	0.23	-1.1
2,815,705	+		GFF2780	0.24	-0.6
2,815,705	+		GFF2780	0.24	-1.9
2,815,705	+		GFF2780	0.24	-0.6
2,815,705	+		GFF2780	0.24	+1.1
2,815,705	+		GFF2780	0.24	-0.1
2,815,705	+		GFF2780	0.24	-1.2
2,815,713	-		GFF2780	0.25	+0.2
2,815,713	-		GFF2780	0.25	-0.3
2,815,713	-		GFF2780	0.25	-0.6
2,815,713	-		GFF2780	0.25	+0.9
2,815,713	-		GFF2780	0.25	-1.3
2,815,713	-		GFF2780	0.25	-2.3
2,815,713	-		GFF2780	0.25	+1.1
2,815,721	-		GFF2780	0.26	+0.1
2,815,721	-		GFF2780	0.26	-0.6
2,815,734	+		GFF2780	0.27	+0.2
2,815,742	-		GFF2780	0.28	+0.5
2,815,764	+		GFF2780	0.31	-1.7
2,815,774	+		GFF2780	0.32	-1.3
2,815,774	+		GFF2780	0.32	+0.1
2,815,774	+		GFF2780	0.32	-0.8
2,815,774	+		GFF2780	0.32	-1.6
2,815,774	+		GFF2780	0.32	+0.0
2,815,774	+		GFF2780	0.32	-1.5
2,815,774	+		GFF2780	0.32	-1.4
2,815,774	+		GFF2780	0.32	-2.2
2,815,782	-		GFF2780	0.33	+0.3
2,815,782	-		GFF2780	0.33	-0.7
2,815,782	-		GFF2780	0.33	+0.4
2,815,782	-		GFF2780	0.33	-0.4
2,815,782	-		GFF2780	0.33	-1.3
2,815,782	-		GFF2780	0.33	+0.3
2,815,782	-		GFF2780	0.33	-1.3
2,815,786	+		GFF2780	0.33	+0.7
2,815,799	+		GFF2780	0.35	-0.4
2,815,806	+		GFF2780	0.36	-2.3
2,815,807	-		GFF2780	0.36	-0.3
2,815,814	-		GFF2780	0.36	-1.9
2,815,821	+		GFF2780	0.37	-1.7
2,815,821	+		GFF2780	0.37	+2.3
2,815,829	-		GFF2780	0.38	-0.4
2,815,876	-		GFF2780	0.44	+0.2
2,815,882	+		GFF2780	0.44	-0.3
2,815,921	+		GFF2780	0.49	-1.6
2,815,929	-		GFF2780	0.50	+0.3
2,815,929	-		GFF2780	0.50	-1.6
2,815,929	-		GFF2780	0.50	+0.4
2,815,936	-		GFF2780	0.51	+0.0
2,815,986	+		GFF2780	0.56	-1.4
2,816,022	-		GFF2780	0.61	-1.4
2,816,030	+		GFF2780	0.61	-0.3
2,816,033	+		GFF2780	0.62	-0.3
2,816,046	-		GFF2780	0.63	-1.3
2,816,059	-		GFF2780	0.65	-1.3
2,816,072	+		GFF2780	0.66	-2.1
2,816,084	+		GFF2780	0.68	+0.5
2,816,084	+		GFF2780	0.68	-0.1
2,816,089	+		GFF2780	0.68	-0.9
2,816,129	-		GFF2780	0.73	-0.1
2,816,129	-		GFF2780	0.73	-0.5
2,816,131	+		GFF2780	0.73	-0.2
2,816,131	+		GFF2780	0.73	+0.4
2,816,131	+		GFF2780	0.73	+0.4
2,816,131	+		GFF2780	0.73	+0.6
2,816,131	+		GFF2780	0.73	-1.8
2,816,139	-		GFF2780	0.74	+0.9
2,816,139	-		GFF2780	0.74	-1.0
2,816,139	-		GFF2780	0.74	+0.9
2,816,141	+		GFF2780	0.74	+0.5
2,816,152	+		GFF2780	0.76	-0.7
2,816,152	-		GFF2780	0.76	-1.1
2,816,152	-		GFF2780	0.76	-0.6
2,816,152	-		GFF2780	0.76	-1.3
2,816,152	-		GFF2780	0.76	-2.1
2,816,179	+		GFF2780	0.79	+0.7
2,816,186	-		GFF2780	0.80	-1.5
2,816,187	-		GFF2780	0.80	+1.3
2,816,196	+		GFF2780	0.81	-0.3
2,816,203	-		GFF2780	0.81	-0.9
2,816,204	-		GFF2780	0.82	+0.3
2,816,204	-		GFF2780	0.82	-0.3
2,816,210	-		GFF2780	0.82	-0.6
2,816,219	-		GFF2780	0.83	+0.4
2,816,237	-		GFF2780	0.85	-1.5
2,816,244	+		GFF2780	0.86	+1.1
2,816,251	+		GFF2780	0.87	-0.4
2,816,251	-		GFF2780	0.87	+0.9
2,816,252	-		GFF2780	0.87	-1.8
2,816,252	-		GFF2780	0.87	-0.6
2,816,259	+		GFF2780	0.88	+0.4
2,816,264	+		GFF2780	0.89	+0.4
2,816,264	+		GFF2780	0.89	-0.3
2,816,268	+		GFF2780	0.89	-0.8
2,816,272	-		GFF2780	0.89	+0.5
2,816,272	-		GFF2780	0.89	-0.7
2,816,273	+		GFF2780	0.90	-2.6
2,816,276	-				+0.8
2,816,302	+				-1.3
2,816,310	-				-1.7
2,816,334	+				-1.0
2,816,409	+				-0.4
2,816,410	-				+0.8
2,816,417	-				-0.9
2,816,423	+				-0.8
2,816,423	+				-0.6
2,816,490	-				+0.0
2,816,516	+				-1.1
2,816,524	-				-3.0
2,816,526	+				-1.3
2,816,561	+				-1.0
2,816,566	+				+0.5
2,816,569	-				-0.2
2,816,571	+				+0.7
2,816,599	+				-0.7
2,816,599	+				-0.3
2,816,599	+				-0.5
2,816,599	+				-0.3
2,816,599	+				-0.7
2,816,599	+				+0.6
2,816,599	+				-1.7
2,816,599	+				-0.4
2,816,607	-				-2.0
2,816,614	-				-0.5
2,816,642	+		GFF2781	0.10	-0.9
2,816,650	-		GFF2781	0.11	+1.1
2,816,650	-		GFF2781	0.11	-0.4
2,816,650	-		GFF2781	0.11	-0.6
2,816,652	+		GFF2781	0.11	-1.7
2,816,654	-		GFF2781	0.11	-0.8
2,816,660	-		GFF2781	0.12	-0.3
2,816,660	-		GFF2781	0.12	+0.6
2,816,660	-		GFF2781	0.12	+0.4
2,816,678	-		GFF2781	0.13	-1.7
2,816,686	+		GFF2781	0.13	+0.3
2,816,698	+		GFF2781	0.14	-0.4
2,816,716	-		GFF2781	0.15	-0.3
2,816,716	-		GFF2781	0.15	-1.5
2,816,735	+		GFF2781	0.16	-0.9
2,816,737	-		GFF2781	0.16	+0.5
2,816,742	+		GFF2781	0.16	+2.3
2,816,749	-		GFF2781	0.17	-1.0
2,816,751	-		GFF2781	0.17	-1.2
2,816,756	+		GFF2781	0.17	-0.2
2,816,756	+		GFF2781	0.17	+0.1
2,816,756	+		GFF2781	0.17	-0.4
2,816,775	+		GFF2781	0.18	-0.9
2,816,784	+		GFF2781	0.19	+0.0
2,816,784	+		GFF2781	0.19	-2.1
2,816,784	+		GFF2781	0.19	-1.9
2,816,784	+		GFF2781	0.19	+0.3
2,816,792	-		GFF2781	0.19	-1.9
2,816,799	-		GFF2781	0.19	-1.0
2,816,839	-		GFF2781	0.22	+0.1
2,816,850	+		GFF2781	0.22	-0.9
2,816,851	+		GFF2781	0.22	-0.2
2,816,851	+		GFF2781	0.22	-0.3
2,816,851	+		GFF2781	0.22	-1.2
2,816,859	-		GFF2781	0.23	-1.8
2,816,859	-		GFF2781	0.23	-0.0
2,816,861	+		GFF2781	0.23	-0.3
2,816,869	-		GFF2781	0.23	-1.4
2,816,932	-		GFF2781	0.27	-0.6
2,816,932	-		GFF2781	0.27	+1.7
2,816,947	+		GFF2781	0.28	-0.8
2,816,988	+		GFF2781	0.30	-0.2
2,816,988	+		GFF2781	0.30	-1.2
2,816,995	+		GFF2781	0.31	-0.5
2,816,995	+		GFF2781	0.31	+0.5
2,816,996	-		GFF2781	0.31	-1.2
2,816,996	-		GFF2781	0.31	-1.3
2,816,996	-		GFF2781	0.31	-0.4
2,816,996	-		GFF2781	0.31	+0.1
2,816,997	+		GFF2781	0.31	-2.0
2,817,001	-		GFF2781	0.31	-1.2
2,817,003	-		GFF2781	0.31	-1.9
2,817,003	-		GFF2781	0.31	+0.6
2,817,027	-		GFF2781	0.32	-1.8
2,817,033	+		GFF2781	0.33	+2.1
2,817,034	-		GFF2781	0.33	+1.0
2,817,041	-		GFF2781	0.33	-0.6
2,817,041	-		GFF2781	0.33	-0.1
2,817,047	-		GFF2781	0.34	-0.7
2,817,066	+		GFF2781	0.35	-1.3
2,817,085	+		GFF2781	0.36	-1.7
2,817,085	+		GFF2781	0.36	-1.1
2,817,085	+		GFF2781	0.36	-0.6
2,817,085	+		GFF2781	0.36	+0.9
2,817,093	-		GFF2781	0.36	+0.1
2,817,093	-		GFF2781	0.36	+0.9
2,817,117	+		GFF2781	0.38	-0.5
2,817,126	-		GFF2781	0.38	-0.3
2,817,126	-		GFF2781	0.38	-0.5
2,817,147	+		GFF2781	0.39	-0.7
2,817,155	-		GFF2781	0.40	-0.1
2,817,155	-		GFF2781	0.40	-1.0
2,817,157	-		GFF2781	0.40	-1.6
2,817,168	+		GFF2781	0.40	-1.1
2,817,168	+		GFF2781	0.40	-0.9
2,817,176	-		GFF2781	0.41	-1.6
2,817,176	-		GFF2781	0.41	-0.6
2,817,176	-		GFF2781	0.41	+1.0
2,817,189	+		GFF2781	0.42	+0.6
2,817,189	+		GFF2781	0.42	-0.3
2,817,192	+		GFF2781	0.42	+0.2
2,817,197	-		GFF2781	0.42	-1.6
2,817,214	+		GFF2781	0.43	-1.3
2,817,216	+		GFF2781	0.43	-0.5
2,817,216	+		GFF2781	0.43	-0.4
2,817,216	+		GFF2781	0.43	-0.3
2,817,222	+		GFF2781	0.44	-0.6
2,817,223	+		GFF2781	0.44	-0.4
2,817,224	-		GFF2781	0.44	+1.0
2,817,246	+		GFF2781	0.45	-1.0
2,817,250	-		GFF2781	0.45	+0.4
2,817,251	-		GFF2781	0.45	+0.1
2,817,254	-		GFF2781	0.45	-1.1
2,817,290	+		GFF2781	0.47	+0.3
2,817,291	+		GFF2781	0.47	-0.4
2,817,299	-		GFF2781	0.48	+0.9
2,817,304	+		GFF2781	0.48	+1.1
2,817,334	+		GFF2781	0.50	-0.4
2,817,336	+		GFF2781	0.50	-0.9
2,817,336	+		GFF2781	0.50	-0.7
2,817,336	+		GFF2781	0.50	-1.1
2,817,336	+		GFF2781	0.50	-0.1
2,817,344	-		GFF2781	0.50	-0.8
2,817,344	-		GFF2781	0.50	-0.8
2,817,344	-		GFF2781	0.50	+0.6
2,817,344	-		GFF2781	0.50	+0.5
2,817,344	-		GFF2781	0.50	+1.2
2,817,344	-		GFF2781	0.50	-0.7
2,817,344	-		GFF2781	0.50	-1.1
2,817,344	-		GFF2781	0.50	-0.9
2,817,344	-		GFF2781	0.50	-1.3
2,817,344	-		GFF2781	0.50	+1.7
2,817,344	-		GFF2781	0.50	-1.9
2,817,344	-		GFF2781	0.50	-1.5
2,817,344	-		GFF2781	0.50	-0.4
2,817,345	-		GFF2781	0.51	+0.9
2,817,389	+		GFF2781	0.53	-0.3
2,817,394	+		GFF2781	0.53	-1.3
2,817,397	-		GFF2781	0.54	-1.4
2,817,402	-		GFF2781	0.54	+1.3
2,817,412	-		GFF2781	0.54	-1.5
2,817,429	-		GFF2781	0.55	-0.8
2,817,439	-		GFF2781	0.56	-1.5
2,817,439	-		GFF2781	0.56	+0.4
2,817,440	+		GFF2781	0.56	-0.7
2,817,441	-		GFF2781	0.56	-1.1
2,817,441	-		GFF2781	0.56	-0.1
2,817,448	-		GFF2781	0.56	-0.7
2,817,449	-		GFF2781	0.56	+0.4
2,817,476	+		GFF2781	0.58	+0.9
2,817,507	-		GFF2781	0.60	+0.1
2,817,568	+		GFF2781	0.63	+0.2
2,817,571	-		GFF2781	0.63	-0.9
2,817,575	+		GFF2781	0.64	-0.5
2,817,577	+		GFF2781	0.64	-1.2
2,817,577	+		GFF2781	0.64	+0.9
2,817,577	+		GFF2781	0.64	-1.8
2,817,577	+		GFF2781	0.64	-0.4
2,817,577	+		GFF2781	0.64	-0.1
2,817,579	-		GFF2781	0.64	-0.3
2,817,582	+		GFF2781	0.64	+0.2
2,817,585	-		GFF2781	0.64	+0.1
2,817,590	+		GFF2781	0.65	+0.3
2,817,598	-		GFF2781	0.65	-0.6
2,817,604	+		GFF2781	0.65	-0.7
2,817,613	+		GFF2781	0.66	-1.8
2,817,645	+		GFF2781	0.68	+0.2
2,817,647	+		GFF2781	0.68	-0.6
2,817,655	-		GFF2781	0.68	-1.8
2,817,655	-		GFF2781	0.68	-0.3
2,817,655	-		GFF2781	0.68	-1.0
2,817,660	+		GFF2781	0.68	-0.1
2,817,660	+		GFF2781	0.68	+2.7
2,817,660	+		GFF2781	0.68	+0.9
2,817,660	+		GFF2781	0.68	+0.0
2,817,660	+		GFF2781	0.68	+0.5
2,817,660	+		GFF2781	0.68	+0.3
2,817,663	-		GFF2781	0.69	-0.6
2,817,668	-		GFF2781	0.69	-0.4
2,817,668	-		GFF2781	0.69	+1.3
2,817,668	-		GFF2781	0.69	-1.8
2,817,731	+		GFF2781	0.73	+1.3
2,817,741	+		GFF2781	0.73	-0.2
2,817,741	+		GFF2781	0.73	-0.4
2,817,741	+		GFF2781	0.73	-0.4
2,817,741	+		GFF2781	0.73	-0.7
2,817,741	+		GFF2781	0.73	+0.7
2,817,741	+		GFF2781	0.73	-1.7
2,817,741	+		GFF2781	0.73	-0.7
2,817,741	+		GFF2781	0.73	-0.7
2,817,741	+		GFF2781	0.73	-1.5
2,817,741	+		GFF2781	0.73	-1.3
2,817,741	+		GFF2781	0.73	-1.8
2,817,741	+		GFF2781	0.73	-1.0
2,817,741	+		GFF2781	0.73	-1.1
2,817,744	-		GFF2781	0.73	-0.6
2,817,749	-		GFF2781	0.74	-1.0
2,817,749	-		GFF2781	0.74	+0.5
2,817,749	-		GFF2781	0.74	-0.5
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2,817,749	-		GFF2781	0.74	-2.1
2,817,749	-		GFF2781	0.74	+0.1
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2,818,292	+				+0.9
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