Strain Fitness in Sphingobium sp. HT1-2 around GFF2737

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,762,787	-		GFF2736	0.21	-2.2
2,762,819	-		GFF2736	0.23	-0.9
2,762,836	+		GFF2736	0.25	-0.4
2,762,841	+		GFF2736	0.25	+1.3
2,762,844	-		GFF2736	0.25	+1.4
2,762,844	-		GFF2736	0.25	-1.3
2,762,864	+		GFF2736	0.27	-0.5
2,762,872	-		GFF2736	0.28	+0.2
2,762,879	-		GFF2736	0.28	-1.1
2,762,881	-		GFF2736	0.28	+0.0
2,762,881	-		GFF2736	0.28	+0.0
2,762,903	-		GFF2736	0.30	-0.4
2,762,918	-		GFF2736	0.31	-0.5
2,762,919	+		GFF2736	0.31	+0.8
2,762,924	+		GFF2736	0.32	-0.7
2,762,927	-		GFF2736	0.32	-0.0
2,762,927	-		GFF2736	0.32	-1.7
2,762,929	+		GFF2736	0.32	-1.8
2,762,937	-		GFF2736	0.33	-1.6
2,762,937	-		GFF2736	0.33	-1.1
2,762,991	-		GFF2736	0.37	-1.4
2,763,013	-		GFF2736	0.39	-1.0
2,763,020	-		GFF2736	0.40	+0.7
2,763,040	-		GFF2736	0.41	-2.1
2,763,073	+		GFF2736	0.44	-0.0
2,763,074	+		GFF2736	0.44	-1.6
2,763,082	-		GFF2736	0.45	+0.3
2,763,087	-		GFF2736	0.45	-1.0
2,763,092	+		GFF2736	0.45	-1.3
2,763,121	-		GFF2736	0.48	+0.6
2,763,127	+		GFF2736	0.48	-0.5
2,763,127	+		GFF2736	0.48	+0.2
2,763,137	+		GFF2736	0.49	-0.4
2,763,141	-		GFF2736	0.49	-1.1
2,763,173	+		GFF2736	0.52	-1.0
2,763,173	+		GFF2736	0.52	+0.6
2,763,174	+		GFF2736	0.52	-1.1
2,763,181	-		GFF2736	0.53	+0.1
2,763,190	+		GFF2736	0.53	+0.0
2,763,192	+		GFF2736	0.53	-1.5
2,763,192	+		GFF2736	0.53	+0.5
2,763,192	+		GFF2736	0.53	+0.3
2,763,200	-		GFF2736	0.54	-0.5
2,763,200	-		GFF2736	0.54	-0.2
2,763,200	-		GFF2736	0.54	+0.7
2,763,200	-		GFF2736	0.54	-1.1
2,763,200	-		GFF2736	0.54	-0.5
2,763,200	-		GFF2736	0.54	-0.7
2,763,214	+		GFF2736	0.55	-0.8
2,763,214	+		GFF2736	0.55	+1.5
2,763,224	-		GFF2736	0.56	-0.3
2,763,232	+		GFF2736	0.57	-0.0
2,763,232	+		GFF2736	0.57	-2.4
2,763,233	+		GFF2736	0.57	-0.0
2,763,235	-		GFF2736	0.57	+0.2
2,763,240	-		GFF2736	0.57	+0.4
2,763,240	-		GFF2736	0.57	-0.5
2,763,240	-		GFF2736	0.57	-0.0
2,763,240	-		GFF2736	0.57	-1.3
2,763,242	+		GFF2736	0.58	-0.5
2,763,268	+		GFF2736	0.60	-0.4
2,763,276	-		GFF2736	0.60	+0.1
2,763,276	-		GFF2736	0.60	-1.8
2,763,306	+		GFF2736	0.63	-1.6
2,763,342	+		GFF2736	0.66	+0.3
2,763,348	-		GFF2736	0.66	+1.0
2,763,348	-		GFF2736	0.66	-0.3
2,763,348	-		GFF2736	0.66	-1.1
2,763,348	-		GFF2736	0.66	-1.4
2,763,428	+		GFF2736	0.73	+1.0
2,763,428	+		GFF2736	0.73	+0.6
2,763,436	-		GFF2736	0.73	-1.6
2,763,436	-		GFF2736	0.73	+1.2
2,763,436	-		GFF2736	0.73	-0.8
2,763,458	+		GFF2736	0.75	-0.6
2,763,461	-		GFF2736	0.75	-2.3
2,763,463	+		GFF2736	0.75	-1.3
2,763,463	+		GFF2736	0.75	-0.5
2,763,471	-		GFF2736	0.76	-1.0
2,763,474	+		GFF2736	0.76	-1.1
2,763,474	+		GFF2736	0.76	-1.4
2,763,474	+		GFF2736	0.76	+0.4
2,763,474	+		GFF2736	0.76	-0.4
2,763,474	+		GFF2736	0.76	-0.3
2,763,482	-		GFF2736	0.77	+0.0
2,763,482	-		GFF2736	0.77	+0.8
2,763,482	-		GFF2736	0.77	+0.1
2,763,482	-		GFF2736	0.77	-0.2
2,763,482	-		GFF2736	0.77	-1.1
2,763,482	-		GFF2736	0.77	-0.2
2,763,482	-		GFF2736	0.77	-1.2
2,763,482	-		GFF2736	0.77	+0.7
2,763,487	-		GFF2736	0.77	-0.7
2,763,489	+		GFF2736	0.78	-1.0
2,763,497	-		GFF2736	0.78	+0.7
2,763,497	-		GFF2736	0.78	-0.4
2,763,497	-		GFF2736	0.78	-0.4
2,763,499	+		GFF2736	0.78	-1.8
2,763,501	+		GFF2736	0.78	-1.1
2,763,507	-		GFF2736	0.79	+0.4
2,763,507	-		GFF2736	0.79	-0.1
2,763,507	-		GFF2736	0.79	-0.2
2,763,509	-		GFF2736	0.79	-0.5
2,763,514	-		GFF2736	0.80	-0.1
2,763,527	-		GFF2736	0.81	+0.6
2,763,554	+		GFF2736	0.83	-0.9
2,763,554	+		GFF2736	0.83	-0.5
2,763,554	+		GFF2736	0.83	+1.0
2,763,554	+		GFF2736	0.83	-0.9
2,763,557	-		GFF2736	0.83	-1.0
2,763,562	-		GFF2736	0.83	+0.1
2,763,565	-		GFF2736	0.84	-0.5
2,763,565	-		GFF2736	0.84	+1.1
2,763,574	+		GFF2736	0.84	-0.4
2,763,574	+		GFF2736	0.84	+0.4
2,763,574	+		GFF2736	0.84	-0.4
2,763,574	+		GFF2736	0.84	-0.5
2,763,599	+		GFF2736	0.86	-0.5
2,763,599	+		GFF2736	0.86	-1.1
2,763,607	-		GFF2736	0.87	+0.1
2,763,609	-		GFF2736	0.87	-1.7
2,763,609	-		GFF2736	0.87	-0.3
2,763,609	-		GFF2736	0.87	-0.2
2,763,650	+				+0.2
2,763,655	+				-0.1
2,763,655	+				+0.3
2,763,663	-				+2.0
2,763,663	-				-0.7
2,763,668	-				+0.3
2,763,700	-				+0.2
2,763,713	-				-2.0
2,763,747	+				+1.5
2,763,755	-				+2.1
2,763,772	-				+1.1
2,763,772	-				-0.2
2,763,785	+				+1.1
2,763,805	-				-1.6
2,763,813	+				-1.5
2,763,813	+				-1.5
2,763,813	+				+0.5
2,763,821	-				+1.2
2,763,823	+				-0.4
2,763,824	+				-1.8
2,763,832	-				-0.7
2,763,832	-				-1.1
2,763,832	-				+0.5
2,763,842	-				-0.4
2,763,844	-				-0.7
2,763,844	-				-0.3
2,763,881	+				+1.2
2,763,886	+				-2.2
2,763,886	+				-2.2
2,763,894	-				-1.3
2,763,918	+				-1.1
2,763,928	+				-1.2
2,763,951	+		GFF2737	0.11	-1.1
2,763,965	+		GFF2737	0.12	-0.6
2,763,965	-		GFF2737	0.12	-0.6
2,763,970	+		GFF2737	0.13	+0.9
2,763,985	+		GFF2737	0.14	-0.3
2,763,992	-		GFF2737	0.14	+1.1
2,764,023	+		GFF2737	0.16	+0.1
2,764,041	+		GFF2737	0.18	+0.5
2,764,049	-		GFF2737	0.18	+0.5
2,764,049	-		GFF2737	0.18	-1.0
2,764,049	-		GFF2737	0.18	-0.3
2,764,049	-		GFF2737	0.18	-1.6
2,764,104	+		GFF2737	0.22	+0.6
2,764,104	+		GFF2737	0.22	-0.9
2,764,112	-		GFF2737	0.23	-1.7
2,764,112	-		GFF2737	0.23	-0.3
2,764,112	-		GFF2737	0.23	-0.3
2,764,118	+		GFF2737	0.23	-0.3
2,764,118	+		GFF2737	0.23	-0.9
2,764,118	+		GFF2737	0.23	-0.0
2,764,118	+		GFF2737	0.23	-2.2
2,764,126	-		GFF2737	0.23	-1.1
2,764,131	+		GFF2737	0.24	-1.2
2,764,169	-		GFF2737	0.26	+0.6
2,764,205	+		GFF2737	0.29	-0.5
2,764,213	-		GFF2737	0.30	-0.9
2,764,213	-		GFF2737	0.30	-1.1
2,764,213	-		GFF2737	0.30	-0.6
2,764,213	-		GFF2737	0.30	+0.2
2,764,222	+		GFF2737	0.30	+0.3
2,764,223	-		GFF2737	0.30	-0.2
2,764,239	-		GFF2737	0.31	+0.0
2,764,276	+		GFF2737	0.34	-0.9
2,764,290	-		GFF2737	0.35	-0.7
2,764,292	+		GFF2737	0.35	+0.2
2,764,292	+		GFF2737	0.35	+0.6
2,764,292	-		GFF2737	0.35	-0.5
2,764,292	-		GFF2737	0.35	+0.3
2,764,292	-		GFF2737	0.35	-0.2
2,764,297	+		GFF2737	0.35	+0.0
2,764,300	-		GFF2737	0.36	-0.4
2,764,300	-		GFF2737	0.36	+0.7
2,764,300	-		GFF2737	0.36	-1.7
2,764,305	-		GFF2737	0.36	-0.2
2,764,347	-		GFF2737	0.39	-0.7
2,764,352	-		GFF2737	0.39	-1.8
2,764,352	-		GFF2737	0.39	+0.6
2,764,363	-		GFF2737	0.40	-0.5
2,764,367	-		GFF2737	0.40	-0.7
2,764,461	-		GFF2737	0.47	-1.3
2,764,471	-		GFF2737	0.47	+0.0
2,764,503	-		GFF2737	0.50	-1.3
2,764,531	+		GFF2737	0.52	+0.7
2,764,531	+		GFF2737	0.52	-0.4
2,764,536	+		GFF2737	0.52	-1.3
2,764,555	+		GFF2737	0.53	-0.2
2,764,577	+		GFF2737	0.55	-0.5
2,764,617	-		GFF2737	0.58	+0.5
2,764,634	+		GFF2737	0.59	-0.3
2,764,644	-		GFF2737	0.59	-0.1
2,764,660	+		GFF2737	0.60	+0.5
2,764,660	+		GFF2737	0.60	+0.8
2,764,668	-		GFF2737	0.61	+0.5
2,764,710	+		GFF2737	0.64	-1.9
2,764,711	+		GFF2737	0.64	+0.7
2,764,718	-		GFF2737	0.65	+0.4
2,764,733	+		GFF2737	0.66	+0.7
2,764,734	-		GFF2737	0.66	-0.9
2,764,758	-		GFF2737	0.67	+1.3
2,764,812	+		GFF2737	0.71	+0.5
2,764,814	+		GFF2737	0.71	-0.1
2,764,819	-		GFF2737	0.72	-0.8
2,764,842	+		GFF2737	0.73	-1.1
2,764,850	-		GFF2737	0.74	+0.3
2,764,887	-		GFF2737	0.76	-0.4
2,764,921	-		GFF2737	0.79	+1.1
2,764,921	-		GFF2737	0.79	-1.4
2,764,921	-		GFF2737	0.79	+0.4
2,764,921	-		GFF2737	0.79	-0.6
2,764,923	+		GFF2737	0.79	+0.5
2,764,965	+		GFF2737	0.82	+0.4
2,764,973	-		GFF2737	0.82	-1.5
2,765,035	+		GFF2737	0.86	+0.1
2,765,035	+		GFF2737	0.86	-0.6
2,765,043	-		GFF2737	0.87	+0.1
2,765,043	-		GFF2737	0.87	-1.1
2,765,043	-		GFF2737	0.87	-0.9
2,765,096	-				-1.5
2,765,106	-				+0.9
2,765,134	-				-0.7
2,765,167	-				+0.0
2,765,203	-				+1.3
2,765,210	+				+0.2
2,765,213	-				+0.7
2,765,218	-				-0.8
2,765,224	+				-1.1
2,765,232	-				-0.5
2,765,232	-				-0.7
2,765,232	-				-0.4
2,765,232	-				-1.1
2,765,232	-				-0.5
2,765,232	-				+0.6
2,765,241	-				-1.0
2,765,260	-				+1.0
2,765,341	+		GFF2738	0.12	+0.3
2,765,349	-		GFF2738	0.13	+0.9
2,765,361	-		GFF2738	0.15	-0.8
2,765,389	+		GFF2738	0.18	+0.0
2,765,397	-		GFF2738	0.19	+0.5
2,765,433	+		GFF2738	0.22	-0.5
2,765,441	-		GFF2738	0.23	-2.2
2,765,443	+		GFF2738	0.24	-1.5
2,765,563	-		GFF2738	0.37	+0.6
2,765,577	+		GFF2738	0.38	+0.7
2,765,577	+		GFF2738	0.38	-0.6
2,765,585	-		GFF2738	0.39	+0.8
2,765,585	-		GFF2738	0.39	-0.4
2,765,585	-		GFF2738	0.39	-0.5
2,765,585	-		GFF2738	0.39	-0.3
2,765,585	-		GFF2738	0.39	-0.5
2,765,653	+		GFF2738	0.46	-1.1
2,765,653	+		GFF2738	0.46	+0.5
2,765,653	+		GFF2738	0.46	-1.4
2,765,653	+		GFF2738	0.46	-0.9
2,765,653	+		GFF2738	0.46	+1.3
2,765,653	+		GFF2738	0.46	+0.1
2,765,653	+		GFF2738	0.46	-1.9
2,765,653	+		GFF2738	0.46	-0.9
2,765,653	+		GFF2738	0.46	+0.2
2,765,655	+		GFF2738	0.47	-0.6
2,765,655	+		GFF2738	0.47	-2.0
2,765,661	-		GFF2738	0.47	-0.7
2,765,661	-		GFF2738	0.47	-1.1
2,765,661	-		GFF2738	0.47	+0.4
2,765,661	-		GFF2738	0.47	-0.3
2,765,661	-		GFF2738	0.47	-0.3
2,765,661	-		GFF2738	0.47	-0.5
2,765,661	-		GFF2738	0.47	+0.5
2,765,661	-		GFF2738	0.47	-0.9
2,765,661	-		GFF2738	0.47	-0.6
2,765,661	-		GFF2738	0.47	+0.4
2,765,661	-		GFF2738	0.47	+0.0
2,765,661	-		GFF2738	0.47	-0.1
2,765,661	-		GFF2738	0.47	-0.5
2,765,661	-		GFF2738	0.47	+0.5
2,765,661	-		GFF2738	0.47	-0.3
2,765,661	-		GFF2738	0.47	+0.4
2,765,661	-		GFF2738	0.47	-0.5
2,765,661	-		GFF2738	0.47	-0.4
2,765,661	-		GFF2738	0.47	+0.2
2,765,663	-		GFF2738	0.47	+2.3
2,765,663	-		GFF2738	0.47	-0.5
2,765,663	-		GFF2738	0.47	-0.5
2,765,703	+		GFF2738	0.52	-1.3
2,765,766	-		GFF2738	0.59	-1.0
2,765,814	-		GFF2738	0.64	-0.4
2,766,046	-		GFF2738	0.89	-1.4
2,766,088	-				-0.3
2,766,110	-				-0.5
2,766,130	+				-0.5
2,766,138	-				-0.3
2,766,138	-				-0.5
2,766,138	-				+0.6
2,766,179	+				+0.6
2,766,189	+				-0.4
2,766,197	-				-1.1
2,766,201	+				+1.3
2,766,209	-				+0.6
2,766,209	-				-1.5
2,766,209	-				-0.9
2,766,212	+				+0.8
2,766,220	-				-1.5