Strain Fitness in Sphingobium sp. HT1-2 around GFF2733

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,758,105	-		GFF2732	0.70	-0.8
2,758,108	+		GFF2732	0.70	-0.6
2,758,116	-		GFF2732	0.70	-0.3
2,758,116	-		GFF2732	0.70	-0.2
2,758,148	-		GFF2732	0.71	-2.2
2,758,148	-		GFF2732	0.71	-0.8
2,758,178	-		GFF2732	0.73	+0.5
2,758,188	+		GFF2732	0.73	-1.1
2,758,189	+		GFF2732	0.73	-0.6
2,758,198	-		GFF2732	0.73	+1.6
2,758,198	-		GFF2732	0.73	-1.3
2,758,218	-		GFF2732	0.74	-0.1
2,758,237	+		GFF2732	0.75	+0.5
2,758,237	+		GFF2732	0.75	-1.1
2,758,237	+		GFF2732	0.75	-2.5
2,758,237	+		GFF2732	0.75	-0.2
2,758,237	+		GFF2732	0.75	+0.5
2,758,243	-		GFF2732	0.75	-1.0
2,758,243	-		GFF2732	0.75	-0.4
2,758,245	-		GFF2732	0.75	-0.6
2,758,265	+		GFF2732	0.76	-0.4
2,758,277	-		GFF2732	0.76	+0.8
2,758,280	+		GFF2732	0.76	+0.5
2,758,280	-		GFF2732	0.76	-0.1
2,758,287	+		GFF2732	0.77	-0.8
2,758,295	-		GFF2732	0.77	-1.1
2,758,310	-		GFF2732	0.77	-1.4
2,758,325	+		GFF2732	0.78	-0.5
2,758,341	-		GFF2732	0.79	-1.6
2,758,342	+		GFF2732	0.79	-0.9
2,758,342	+		GFF2732	0.79	-1.1
2,758,342	+		GFF2732	0.79	-2.3
2,758,346	-		GFF2732	0.79	+0.0
2,758,348	-		GFF2732	0.79	-0.8
2,758,350	-		GFF2732	0.79	-0.4
2,758,358	+		GFF2732	0.79	-1.0
2,758,358	+		GFF2732	0.79	-2.1
2,758,358	+		GFF2732	0.79	-1.3
2,758,358	+		GFF2732	0.79	+1.1
2,758,358	+		GFF2732	0.79	-1.0
2,758,366	-		GFF2732	0.80	+0.7
2,758,368	+		GFF2732	0.80	+0.6
2,758,372	+		GFF2732	0.80	-0.7
2,758,380	-		GFF2732	0.80	-0.6
2,758,380	-		GFF2732	0.80	-0.4
2,758,385	+		GFF2732	0.80	-0.2
2,758,409	+		GFF2732	0.81	-1.4
2,758,409	+		GFF2732	0.81	-2.3
2,758,409	-		GFF2732	0.81	-1.4
2,758,410	+		GFF2732	0.81	-1.5
2,758,410	-		GFF2732	0.81	+0.2
2,758,423	+		GFF2732	0.82	-2.6
2,758,433	-		GFF2732	0.82	+0.9
2,758,452	-		GFF2732	0.83	+0.2
2,758,497	+		GFF2732	0.84	-0.1
2,758,510	+		GFF2732	0.85	-0.6
2,758,515	+		GFF2732	0.85	-2.1
2,758,518	-		GFF2732	0.85	-1.0
2,758,539	+		GFF2732	0.86	-1.0
2,758,539	+		GFF2732	0.86	-0.5
2,758,542	+		GFF2732	0.86	-1.3
2,758,550	-		GFF2732	0.86	-0.6
2,758,575	+		GFF2732	0.87	-1.0
2,758,584	+		GFF2732	0.88	-2.3
2,758,585	+		GFF2732	0.88	-1.3
2,758,587	-		GFF2732	0.88	-0.1
2,758,594	+		GFF2732	0.88	-1.5
2,758,602	+		GFF2732	0.88	-1.3
2,758,602	+		GFF2732	0.88	+0.5
2,758,604	+		GFF2732	0.88	-0.7
2,758,609	+		GFF2732	0.89	+0.4
2,758,609	+		GFF2732	0.89	-1.2
2,758,609	+		GFF2732	0.89	-1.8
2,758,609	+		GFF2732	0.89	+1.5
2,758,609	+		GFF2732	0.89	-0.9
2,758,609	+		GFF2732	0.89	-1.0
2,758,609	+		GFF2732	0.89	+0.4
2,758,612	-		GFF2732	0.89	-0.6
2,758,612	-		GFF2732	0.89	-1.0
2,758,617	-		GFF2732	0.89	-0.8
2,758,627	-		GFF2732	0.89	-1.0
2,758,643	+		GFF2732	0.90	-0.5
2,758,650	-				+1.2
2,758,650	-				+0.3
2,758,651	-				-1.4
2,758,690	+				-1.8
2,758,690	+				+0.5
2,758,698	-				-0.8
2,758,746	-				-0.2
2,758,753	-				-1.7
2,758,801	+				-0.1
2,758,809	-				-2.0
2,758,813	+				-0.4
2,758,813	+				-0.9
2,758,813	+				-2.1
2,758,818	+				-0.6
2,758,818	+				+1.6
2,758,818	+				-1.0
2,758,818	+				-0.8
2,758,818	+				+0.6
2,758,821	-				-2.1
2,758,821	-				-1.1
2,758,821	-				-1.7
2,758,821	-				-1.3
2,758,821	-				+0.5
2,758,821	-				-0.8
2,758,821	-				+1.0
2,758,821	-				-0.5
2,758,826	-				-0.4
2,758,826	-				-1.4
2,758,826	-				-0.5
2,758,826	-				+1.4
2,758,834	-				-1.7
2,758,834	-				-0.5
2,758,838	+				-0.5
2,758,838	+				+0.5
2,758,838	+				-0.3
2,758,838	+				-0.4
2,758,838	+				+0.9
2,758,838	+				-0.4
2,758,838	+				-1.1
2,758,838	+				-0.3
2,758,841	-				+0.3
2,758,843	+				-0.8
2,758,843	+				-0.3
2,758,846	-				-1.8
2,758,846	-				-2.4
2,758,846	-				+0.3
2,758,846	-				-0.4
2,758,846	-				+1.6
2,758,848	+				-2.5
2,758,848	+				-0.2
2,758,848	+				-0.7
2,758,856	-				-0.1
2,758,856	-				+0.5
2,758,858	+				-0.5
2,758,858	-				-0.9
2,758,866	-				-0.3
2,758,884	+				+0.5
2,758,904	-				+0.5
2,758,904	-				-0.8
2,758,904	-				-0.9
2,758,907	+				+0.9
2,758,915	-				-0.8
2,758,915	-				-2.4
2,758,963	+				-0.7
2,758,981	-				+1.1
2,759,051	+				-0.6
2,759,061	+				-1.2
2,759,069	-				+0.6
2,759,087	+				-1.6
2,759,095	+				+0.0
2,759,095	+				-1.1
2,759,095	+				+0.3
2,759,095	+				-0.7
2,759,095	+				-1.3
2,759,095	+				-0.5
2,759,095	+				-1.1
2,759,095	-				-0.1
2,759,110	+				-1.0
2,759,110	+				-0.5
2,759,110	+				-0.8
2,759,110	+				-0.1
2,759,110	+				+0.5
2,759,110	+				-2.2
2,759,110	+				-1.8
2,759,118	+				-0.2
2,759,118	-				-0.4
2,759,118	-				-0.5
2,759,118	-				+1.0
2,759,122	+				-1.2
2,759,124	+				-1.3
2,759,130	-				-0.9
2,759,132	+				+1.5
2,759,132	+				+0.7
2,759,132	-				-1.6
2,759,143	+				+0.7
2,759,145	-				-1.0
2,759,146	-				-0.5
2,759,150	-				-0.6
2,759,151	-				+1.3
2,759,160	+				+0.4
2,759,160	+				-2.1
2,759,160	+				-0.8
2,759,160	+				-1.0
2,759,160	+				+1.3
2,759,163	-				-0.6
2,759,168	-				+0.1
2,759,168	-				+0.8
2,759,168	-				+0.2
2,759,171	+		GFF2733	0.10	-1.6
2,759,171	+		GFF2733	0.10	-0.8
2,759,171	+		GFF2733	0.10	-0.3
2,759,171	+		GFF2733	0.10	+0.4
2,759,171	+		GFF2733	0.10	-1.7
2,759,176	+		GFF2733	0.11	-0.6
2,759,176	+		GFF2733	0.11	-0.9
2,759,176	+		GFF2733	0.11	-1.3
2,759,179	-		GFF2733	0.11	-0.5
2,759,179	-		GFF2733	0.11	-0.8
2,759,189	-		GFF2733	0.12	+0.7
2,759,211	+		GFF2733	0.16	-0.1
2,759,238	+		GFF2733	0.19	-0.6
2,759,238	+		GFF2733	0.19	-0.9
2,759,239	-		GFF2733	0.19	-1.1
2,759,241	+		GFF2733	0.20	+0.7
2,759,246	+		GFF2733	0.20	+0.9
2,759,246	-		GFF2733	0.20	-0.5
2,759,249	-		GFF2733	0.21	-0.2
2,759,249	-		GFF2733	0.21	-1.4
2,759,249	-		GFF2733	0.21	-1.6
2,759,249	-		GFF2733	0.21	-1.3
2,759,251	+		GFF2733	0.21	-0.3
2,759,254	-		GFF2733	0.21	-1.7
2,759,272	+		GFF2733	0.24	-1.1
2,759,276	+		GFF2733	0.24	+0.6
2,759,276	+		GFF2733	0.24	-0.3
2,759,284	-		GFF2733	0.26	-0.3
2,759,296	+		GFF2733	0.27	-1.7
2,759,308	+		GFF2733	0.29	-2.1
2,759,314	+		GFF2733	0.30	+0.1
2,759,316	-		GFF2733	0.30	+0.6
2,759,316	-		GFF2733	0.30	+0.3
2,759,316	-		GFF2733	0.30	-1.9
2,759,317	-		GFF2733	0.30	-0.8
2,759,322	-		GFF2733	0.31	-1.3
2,759,322	-		GFF2733	0.31	-0.8
2,759,322	-		GFF2733	0.31	-0.9
2,759,368	+		GFF2733	0.37	-0.1
2,759,368	-		GFF2733	0.37	-0.7
2,759,369	+		GFF2733	0.37	+0.2
2,759,377	-		GFF2733	0.38	-0.3
2,759,425	+		GFF2733	0.45	-0.9
2,759,453	+		GFF2733	0.49	-0.7
2,759,484	+		GFF2733	0.53	+0.6
2,759,497	+		GFF2733	0.55	-0.5
2,759,505	-		GFF2733	0.56	-0.5
2,759,510	-		GFF2733	0.57	+0.1
2,759,518	+		GFF2733	0.58	-2.7
2,759,526	-		GFF2733	0.59	-0.6
2,759,549	-		GFF2733	0.62	-0.4
2,759,551	+		GFF2733	0.62	-1.4
2,759,558	+		GFF2733	0.63	-0.5
2,759,559	-		GFF2733	0.63	-0.5
2,759,559	-		GFF2733	0.63	-0.6
2,759,594	+		GFF2733	0.68	-0.8
2,759,606	+		GFF2733	0.70	+1.1
2,759,612	-		GFF2733	0.71	-0.1
2,759,628	+		GFF2733	0.73	+1.0
2,759,651	+		GFF2733	0.76	+0.4
2,759,656	+		GFF2733	0.77	+1.1
2,759,669	-		GFF2733	0.78	-0.9
2,759,747	+		GFF2733	0.89	-1.3
2,759,763	+				-0.4
2,759,765	-				-0.5
2,759,771	-				-0.8
2,759,795	+				-0.9
2,759,803	-				-0.5
2,759,803	-				-1.1
2,759,821	+				+1.1
2,759,887	+				-0.7
2,759,895	+				-0.4
2,759,897	+				-0.5
2,759,905	-				-0.3
2,759,906	+				-1.8
2,759,906	+				-1.8
2,759,906	+				-0.9
2,759,906	+				-1.1
2,759,906	+				-1.2
2,759,914	-				-0.2
2,759,914	-				-0.3
2,759,914	-				-0.6
2,759,924	-				-0.1
2,759,931	-				+0.9
2,759,942	-				-0.3
2,759,945	+				-1.8
2,759,949	+				-1.3
2,759,949	+				-0.5
2,759,960	+				-1.0
2,759,968	-				-0.4
2,759,981	-				+1.6
2,759,991	-				-1.4
2,760,012	+				+0.2
2,760,051	-				-1.0
2,760,058	+				-1.5
2,760,077	+		GFF2734	0.10	-1.2
2,760,085	-		GFF2734	0.11	-0.2
2,760,085	-		GFF2734	0.11	-0.5
2,760,097	-		GFF2734	0.12	-0.6
2,760,097	-		GFF2734	0.12	-1.0
2,760,120	+		GFF2734	0.14	+1.8
2,760,120	+		GFF2734	0.14	+0.7
2,760,128	-		GFF2734	0.14	-0.8
2,760,128	-		GFF2734	0.14	+0.7
2,760,150	+		GFF2734	0.16	-1.6
2,760,152	+		GFF2734	0.16	-0.1
2,760,156	-		GFF2734	0.17	-0.2
2,760,157	+		GFF2734	0.17	-0.9
2,760,158	-		GFF2734	0.17	+1.0
2,760,164	-		GFF2734	0.17	-0.8
2,760,165	-		GFF2734	0.17	+0.6
2,760,172	+		GFF2734	0.18	+1.1
2,760,183	-		GFF2734	0.19	-1.5
2,760,196	+		GFF2734	0.20	-0.4
2,760,196	+		GFF2734	0.20	-1.1
2,760,196	+		GFF2734	0.20	-0.8
2,760,196	+		GFF2734	0.20	-0.6
2,760,201	+		GFF2734	0.20	-1.6
2,760,201	+		GFF2734	0.20	-1.4
2,760,204	-		GFF2734	0.20	-1.0
2,760,204	-		GFF2734	0.20	+1.1
2,760,204	-		GFF2734	0.20	-1.1
2,760,204	-		GFF2734	0.20	+0.5
2,760,204	-		GFF2734	0.20	-0.8
2,760,204	-		GFF2734	0.20	-0.4
2,760,209	-		GFF2734	0.21	-1.0
2,760,209	-		GFF2734	0.21	-2.1
2,760,234	+		GFF2734	0.23	-1.0
2,760,242	-		GFF2734	0.23	-2.0
2,760,251	+		GFF2734	0.24	-0.8
2,760,251	-		GFF2734	0.24	-2.1
2,760,261	-		GFF2734	0.25	+0.1
2,760,268	+		GFF2734	0.26	-1.3
2,760,278	-		GFF2734	0.26	-1.0
2,760,303	+		GFF2734	0.28	+0.1
2,760,314	+		GFF2734	0.29	+0.6
2,760,314	+		GFF2734	0.29	-0.6
2,760,314	+		GFF2734	0.29	+0.2
2,760,314	+		GFF2734	0.29	-1.7
2,760,314	+		GFF2734	0.29	-0.3
2,760,314	+		GFF2734	0.29	-0.3
2,760,314	+		GFF2734	0.29	-0.1
2,760,314	+		GFF2734	0.29	+1.1
2,760,314	+		GFF2734	0.29	-1.3
2,760,314	+		GFF2734	0.29	-0.9
2,760,321	-		GFF2734	0.30	-0.2
2,760,322	-		GFF2734	0.30	-0.8
2,760,322	-		GFF2734	0.30	-0.4
2,760,322	-		GFF2734	0.30	-0.6
2,760,322	-		GFF2734	0.30	+0.3
2,760,322	-		GFF2734	0.30	-0.9
2,760,322	-		GFF2734	0.30	+0.7
2,760,322	-		GFF2734	0.30	+1.6
2,760,349	-		GFF2734	0.32	-1.1
2,760,366	+		GFF2734	0.33	+0.8
2,760,376	+		GFF2734	0.34	-2.1
2,760,376	+		GFF2734	0.34	-1.4
2,760,376	+		GFF2734	0.34	-1.1
2,760,376	+		GFF2734	0.34	-1.8
2,760,376	+		GFF2734	0.34	+0.3
2,760,379	-		GFF2734	0.34	-1.4
2,760,384	-		GFF2734	0.35	-0.7
2,760,384	-		GFF2734	0.35	-0.3
2,760,384	-		GFF2734	0.35	+0.6
2,760,389	-		GFF2734	0.35	+0.6
2,760,423	+		GFF2734	0.38	+0.1
2,760,424	-		GFF2734	0.38	-0.4
2,760,474	+		GFF2734	0.42	+1.3
2,760,477	-		GFF2734	0.42	+0.0
2,760,482	-		GFF2734	0.43	+0.4
2,760,482	-		GFF2734	0.43	+0.5
2,760,482	-		GFF2734	0.43	-0.6
2,760,499	+		GFF2734	0.44	-1.3
2,760,507	+		GFF2734	0.45	-0.9
2,760,507	+		GFF2734	0.45	-1.1
2,760,515	-		GFF2734	0.45	+0.4
2,760,515	-		GFF2734	0.45	-0.6
2,760,517	+		GFF2734	0.45	-2.0
2,760,517	+		GFF2734	0.45	-1.1
2,760,520	-		GFF2734	0.46	+0.8
2,760,520	-		GFF2734	0.46	-0.6
2,760,525	-		GFF2734	0.46	+0.9
2,760,525	-		GFF2734	0.46	-0.7
2,760,530	-		GFF2734	0.46	-0.9
2,760,530	-		GFF2734	0.46	+0.2
2,760,585	+		GFF2734	0.51	-0.6
2,760,594	+		GFF2734	0.51	-0.4
2,760,594	+		GFF2734	0.51	-0.4
2,760,594	-		GFF2734	0.51	+0.7
2,760,595	+		GFF2734	0.52	-1.2
2,760,602	-		GFF2734	0.52	-1.1
2,760,602	-		GFF2734	0.52	+0.2
2,760,612	-		GFF2734	0.53	+0.6
2,760,612	-		GFF2734	0.53	-0.6
2,760,632	+		GFF2734	0.54	+0.7
2,760,691	+		GFF2734	0.59	-1.1
2,760,743	+		GFF2734	0.63	-1.3
2,760,743	+		GFF2734	0.63	-1.0
2,760,743	+		GFF2734	0.63	-2.3
2,760,743	+		GFF2734	0.63	-0.4
2,760,751	-		GFF2734	0.64	-0.6
2,760,751	-		GFF2734	0.64	+0.3
2,760,751	-		GFF2734	0.64	+1.2
2,760,751	-		GFF2734	0.64	-1.7
2,760,751	-		GFF2734	0.64	-1.1
2,760,773	-		GFF2734	0.66	-0.3
2,760,783	-		GFF2734	0.67	-1.0
2,760,803	+		GFF2734	0.68	-1.3
2,760,813	+		GFF2734	0.69	-1.4
2,760,813	+		GFF2734	0.69	-0.3
2,760,813	+		GFF2734	0.69	-0.9