Strain Fitness in Sphingobium sp. HT1-2 around GFF2614

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,634,406	-		GFF2612	0.56	+0.0
2,634,406	-		GFF2612	0.56	+0.0
2,634,406	-		GFF2612	0.56	-0.0
2,634,408	+		GFF2612	0.56	-1.1
2,634,408	-		GFF2612	0.56	+0.3
2,634,410	+		GFF2612	0.56	-1.0
2,634,433	+		GFF2612	0.59	+0.2
2,634,436	+		GFF2612	0.59	-0.3
2,634,463	-		GFF2612	0.61	+1.7
2,634,463	-		GFF2612	0.61	-2.4
2,634,466	+		GFF2612	0.62	-0.3
2,634,466	+		GFF2612	0.62	+1.1
2,634,467	+		GFF2612	0.62	-1.3
2,634,472	-		GFF2612	0.62	-1.3
2,634,472	-		GFF2612	0.62	+1.6
2,634,475	+		GFF2612	0.63	-0.4
2,634,475	-		GFF2612	0.63	-0.3
2,634,483	+		GFF2612	0.63	-2.2
2,634,483	+		GFF2612	0.63	-1.1
2,634,483	+		GFF2612	0.63	-1.0
2,634,490	+		GFF2612	0.64	-1.9
2,634,490	+		GFF2612	0.64	+0.7
2,634,490	+		GFF2612	0.64	+1.2
2,634,491	-		GFF2612	0.64	-0.7
2,634,493	-		GFF2612	0.64	+0.5
2,634,498	-		GFF2612	0.65	-0.5
2,634,498	-		GFF2612	0.65	+1.5
2,634,498	-		GFF2612	0.65	+0.7
2,634,498	-		GFF2612	0.65	-1.9
2,634,500	-		GFF2612	0.65	-1.0
2,634,502	+		GFF2612	0.65	-0.7
2,634,502	+		GFF2612	0.65	+0.5
2,634,502	+		GFF2612	0.65	+0.9
2,634,510	-		GFF2612	0.66	-0.7
2,634,562	+		GFF2612	0.71	-1.0
2,634,580	-		GFF2612	0.73	-0.7
2,634,588	+		GFF2612	0.74	-0.3
2,634,596	-		GFF2612	0.75	+0.5
2,634,617	-		GFF2612	0.77	-1.2
2,634,646	+		GFF2612	0.80	-0.3
2,634,646	+		GFF2612	0.80	-0.0
2,634,646	+		GFF2612	0.80	-1.1
2,634,646	-		GFF2612	0.80	+1.6
2,634,654	-		GFF2612	0.80	+1.6
2,634,654	-		GFF2612	0.80	-0.6
2,634,654	-		GFF2612	0.80	-1.2
2,634,655	+		GFF2612	0.81	+0.7
2,634,667	+		GFF2612	0.82	+1.3
2,634,668	+		GFF2612	0.82	+0.1
2,634,668	-		GFF2612	0.82	-0.3
2,634,669	-		GFF2612	0.82	+0.4
2,634,676	-		GFF2612	0.83	-1.8
2,634,681	+		GFF2612	0.83	-0.8
2,634,681	+		GFF2612	0.83	-0.8
2,634,681	+		GFF2612	0.83	-0.2
2,634,681	+		GFF2612	0.83	-2.4
2,634,681	+		GFF2612	0.83	-0.2
2,634,681	+		GFF2612	0.83	-1.3
2,634,681	+		GFF2612	0.83	-0.2
2,634,684	-		GFF2612	0.83	-0.3
2,634,689	-		GFF2612	0.84	-0.3
2,634,689	-		GFF2612	0.84	-0.3
2,634,699	+		GFF2612	0.85	-2.5
2,634,702	-		GFF2612	0.85	+2.1
2,634,709	+		GFF2612	0.86	-1.7
2,634,733	+		GFF2612	0.88	-0.1
2,634,736	-		GFF2612	0.89	-1.2
2,634,738	+		GFF2612	0.89	-0.7
2,634,738	+		GFF2612	0.89	-1.1
2,634,738	+		GFF2612	0.89	-0.9
2,634,738	+		GFF2612	0.89	+1.2
2,634,738	+		GFF2612	0.89	-1.1
2,634,738	+		GFF2612	0.89	-1.4
2,634,738	+		GFF2612	0.89	-0.4
2,634,738	+		GFF2612	0.89	-0.8
2,634,738	+		GFF2612	0.89	-0.8
2,634,738	+		GFF2612	0.89	-0.4
2,634,738	+		GFF2612	0.89	+0.1
2,634,741	-		GFF2612	0.89	+0.6
2,634,746	-		GFF2612	0.90	-0.3
2,634,746	-		GFF2612	0.90	-0.6
2,634,746	-		GFF2612	0.90	-1.6
2,634,746	-		GFF2612	0.90	-0.3
2,634,746	-		GFF2612	0.90	-1.3
2,634,746	-		GFF2612	0.90	-1.0
2,634,746	-		GFF2612	0.90	-1.0
2,634,746	-		GFF2612	0.90	-2.2
2,634,746	-		GFF2612	0.90	-1.3
2,634,746	-		GFF2612	0.90	-0.8
2,634,746	-		GFF2612	0.90	+0.5
2,634,746	-		GFF2612	0.90	-0.3
2,634,746	-		GFF2612	0.90	+0.3
2,634,746	-		GFF2612	0.90	-1.0
2,634,746	-		GFF2612	0.90	-1.4
2,634,746	-		GFF2612	0.90	-0.5
2,634,746	-		GFF2612	0.90	-0.1
2,634,746	-		GFF2612	0.90	-1.1
2,634,746	-		GFF2612	0.90	+1.1
2,634,760	+				+0.5
2,634,770	+				-0.4
2,634,770	+				+0.9
2,634,770	+				+0.6
2,634,770	+				+0.2
2,634,778	-				-0.7
2,634,778	-				-0.4
2,634,786	+				+0.9
2,634,786	+				+1.1
2,634,786	+				-1.6
2,634,805	-				-1.9
2,634,810	-				-0.5
2,634,849	+				-0.3
2,634,853	+				+0.2
2,635,323	-		GFF2613	0.85	-0.9
2,635,352	-		GFF2613	0.90	-0.3
2,635,459	+				-0.1
2,635,467	+				-0.7
2,635,467	-				-1.1
2,635,467	-				-1.2
2,635,469	+				-0.6
2,635,469	+				-0.1
2,635,469	+				-1.3
2,635,471	-				+0.2
2,635,477	-				+0.3
2,635,477	-				+0.7
2,635,477	-				-1.4
2,635,477	-				-0.3
2,635,477	-				-0.9
2,635,499	-				-1.9
2,635,524	-		GFF2614	0.11	-1.3
2,635,525	-		GFF2614	0.11	+0.7
2,635,547	-		GFF2614	0.14	-0.3
2,635,561	-		GFF2614	0.15	-1.3
2,635,605	+		GFF2614	0.19	-0.7
2,635,605	+		GFF2614	0.19	-0.1
2,635,607	+		GFF2614	0.19	-1.1
2,635,615	-		GFF2614	0.20	+1.1
2,635,622	+		GFF2614	0.21	-1.2
2,635,622	+		GFF2614	0.21	+0.1
2,635,630	-		GFF2614	0.21	-0.2
2,635,650	+		GFF2614	0.23	+1.0
2,635,658	-		GFF2614	0.24	-0.5
2,635,698	+		GFF2614	0.28	-2.7
2,635,709	+		GFF2614	0.29	+0.0
2,635,718	+		GFF2614	0.30	-1.1
2,635,731	-		GFF2614	0.31	-1.0
2,635,745	+		GFF2614	0.32	+0.3
2,635,746	-		GFF2614	0.33	-0.4
2,635,751	-		GFF2614	0.33	-1.1
2,635,763	+		GFF2614	0.34	-0.3
2,635,810	+		GFF2614	0.39	+0.3
2,635,811	-		GFF2614	0.39	+2.3
2,635,811	-		GFF2614	0.39	+1.2
2,635,816	-		GFF2614	0.39	-0.3
2,635,823	+		GFF2614	0.40	-0.4
2,635,823	+		GFF2614	0.40	-0.1
2,635,828	+		GFF2614	0.40	-0.4
2,635,831	-		GFF2614	0.41	-0.8
2,635,831	-		GFF2614	0.41	-1.1
2,635,831	-		GFF2614	0.41	-1.8
2,635,839	-		GFF2614	0.41	-0.5
2,635,841	+		GFF2614	0.42	-1.4
2,635,849	+		GFF2614	0.42	+0.0
2,635,849	-		GFF2614	0.42	-0.7
2,635,851	+		GFF2614	0.43	-0.8
2,635,860	-		GFF2614	0.43	+0.7
2,635,867	+		GFF2614	0.44	-0.2
2,635,868	+		GFF2614	0.44	+0.3
2,635,870	-		GFF2614	0.44	-0.9
2,635,875	-		GFF2614	0.45	+0.9
2,635,875	-		GFF2614	0.45	-0.2
2,635,875	-		GFF2614	0.45	-1.9
2,635,875	-		GFF2614	0.45	-0.3
2,635,876	+		GFF2614	0.45	-1.6
2,635,910	+		GFF2614	0.48	-0.7
2,635,924	+		GFF2614	0.50	+0.7
2,635,924	+		GFF2614	0.50	+0.8
2,635,924	+		GFF2614	0.50	+0.5
2,635,924	+		GFF2614	0.50	-0.3
2,635,932	-		GFF2614	0.50	+0.9
2,635,932	-		GFF2614	0.50	-1.2
2,635,932	-		GFF2614	0.50	+1.3
2,635,973	-		GFF2614	0.54	+0.7
2,635,973	-		GFF2614	0.54	+0.8
2,635,997	-		GFF2614	0.57	-0.3
2,636,035	+		GFF2614	0.60	-1.1
2,636,038	-		GFF2614	0.61	-0.7
2,636,038	-		GFF2614	0.61	-0.1
2,636,056	+		GFF2614	0.62	-0.4
2,636,060	+		GFF2614	0.63	+1.1
2,636,090	-		GFF2614	0.66	-0.8
2,636,111	-		GFF2614	0.68	-1.6
2,636,135	-		GFF2614	0.70	-0.8
2,636,140	-		GFF2614	0.70	-0.3
2,636,141	-		GFF2614	0.70	-1.1
2,636,175	-		GFF2614	0.74	+0.7
2,636,179	+		GFF2614	0.74	+0.0
2,636,199	-		GFF2614	0.76	+0.3
2,636,199	-		GFF2614	0.76	-0.8
2,636,212	+		GFF2614	0.77	-1.0
2,636,218	+		GFF2614	0.78	-0.6
2,636,226	-		GFF2614	0.79	+0.4
2,636,233	+		GFF2614	0.79	-1.3
2,636,237	-		GFF2614	0.80	-0.3
2,636,244	+		GFF2614	0.80	-0.4
2,636,244	+		GFF2614	0.80	+0.1
2,636,244	+		GFF2614	0.80	+0.3
2,636,244	+		GFF2614	0.80	+0.1
2,636,252	-		GFF2614	0.81	-0.7
2,636,264	+		GFF2614	0.82	-1.3
2,636,269	+		GFF2614	0.83	-0.4
2,636,277	-		GFF2614	0.83	-1.7
2,636,277	-		GFF2614	0.83	-1.3
2,636,277	-		GFF2614	0.83	-0.5
2,636,280	+		GFF2614	0.84	-0.6
2,636,296	-		GFF2614	0.85	-0.5
2,636,313	+		GFF2614	0.87	-0.9
2,636,313	+		GFF2614	0.87	+0.1
2,636,321	+		GFF2614	0.88	-0.6
2,636,321	+		GFF2614	0.88	-0.3
2,636,321	+		GFF2614	0.88	-0.3
2,636,321	+		GFF2614	0.88	-1.5
2,636,334	-		GFF2614	0.89	-0.1
2,636,339	-		GFF2614	0.89	+0.6
2,636,339	-		GFF2614	0.89	+1.1
2,636,343	+		GFF2614	0.90	-1.3
2,636,344	+		GFF2614	0.90	-1.8
2,636,352	+				-0.3
2,636,371	+				+0.6
2,636,374	+				-0.2
2,636,374	+				-1.2
2,636,379	-				+0.7
2,636,381	+				+0.6
2,636,381	+				+1.1
2,636,381	+				+0.6
2,636,381	+				-0.9
2,636,387	-				+0.4
2,636,389	-				+1.4
2,636,389	-				-1.6
2,636,389	-				-0.8
2,636,389	-				-1.2
2,636,389	-				-0.7
2,636,389	-				+2.3
2,636,389	-				-1.2
2,636,401	-				-0.3
2,636,412	+				-0.7
2,636,437	-				-0.9
2,636,437	-				-0.2
2,636,456	+				-1.0
2,636,459	-				-0.4
2,636,464	-				+0.3
2,636,479	+				-1.2
2,636,479	+				-0.0
2,636,487	-				-1.1
2,636,487	-				-0.4
2,636,512	-				-1.2
2,636,517	+				-1.6
2,636,525	-				-1.7
2,636,530	-				+0.1
2,636,544	+				-1.1
2,636,551	+				-0.1
2,636,577	+				-0.7
2,636,582	+				+0.0
2,636,582	+				-0.1
2,636,585	-				+0.5
2,636,588	+				-1.1
2,636,590	+				-0.5
2,636,590	+				+1.4
2,636,590	+				-1.5
2,636,590	+				-0.2
2,636,590	+				-1.0
2,636,590	-				-1.6
2,636,598	-				-0.3
2,636,598	-				+1.2
2,636,638	+				+0.8
2,636,646	+				-2.4
2,636,649	+				+0.7
2,636,652	-				+0.7
2,636,669	-				-0.3
2,636,672	+				+0.7
2,636,678	+				-1.7
2,636,680	-				-0.3
2,636,685	-				+0.5
2,636,716	+				-2.1
2,636,716	+				-0.1
2,636,726	+				-0.4
2,636,726	+				-0.3
2,636,726	+				-0.3
2,636,726	+				+0.2
2,636,726	+				-1.1
2,636,734	-				-1.3
2,636,770	+				-0.3
2,636,775	+				-1.0
2,636,777	-				-1.1
2,636,782	+				-0.1
2,636,792	-				-0.1
2,636,794	-				-0.9
2,636,795	+				-0.5
2,636,799	-				-0.2
2,636,800	+				-0.7
2,636,800	+				+0.1
2,636,800	+				-1.9
2,636,800	+				-0.1
2,636,800	+				+0.4
2,636,800	+				-1.1
2,636,803	-				+0.0
2,636,808	-				+0.5
2,636,808	-				+0.8
2,636,808	-				-0.3
2,636,815	+				-0.1
2,636,820	+				-1.2
2,636,820	+				-0.4
2,636,828	-				+1.3
2,636,828	-				-1.2
2,636,828	-				-0.7
2,636,830	+				-0.9
2,636,830	+				-0.2
2,636,830	+				+0.8
2,636,830	+				-0.5
2,636,830	+				+0.4
2,636,838	-				-0.5
2,636,844	-				+0.2
2,636,849	+		GFF2615	0.10	+0.9
2,636,849	-		GFF2615	0.10	-0.7
2,636,849	-		GFF2615	0.10	+0.7
2,636,873	+		GFF2615	0.13	-0.5
2,636,941	+		GFF2615	0.21	-1.0
2,636,949	-		GFF2615	0.22	+1.7
2,636,951	+		GFF2615	0.22	-1.6
2,636,952	+		GFF2615	0.22	-1.3
2,636,955	-		GFF2615	0.23	-0.7
2,636,955	-		GFF2615	0.23	+0.6
2,636,955	-		GFF2615	0.23	-1.0
2,636,957	+		GFF2615	0.23	-0.9
2,636,957	+		GFF2615	0.23	-0.3
2,636,957	+		GFF2615	0.23	+0.4
2,636,957	+		GFF2615	0.23	-1.1
2,636,957	+		GFF2615	0.23	-0.7
2,636,957	+		GFF2615	0.23	-0.5
2,636,957	+		GFF2615	0.23	-1.2
2,636,957	+		GFF2615	0.23	-0.4
2,636,957	+		GFF2615	0.23	+0.2
2,636,957	+		GFF2615	0.23	-1.1
2,636,957	+		GFF2615	0.23	-1.2
2,636,957	+		GFF2615	0.23	-1.0
2,636,957	+		GFF2615	0.23	-1.1
2,636,957	+		GFF2615	0.23	-1.0
2,636,957	+		GFF2615	0.23	+0.6
2,636,965	-		GFF2615	0.24	+0.6
2,636,965	-		GFF2615	0.24	-0.5
2,636,965	-		GFF2615	0.24	-0.9
2,636,965	-		GFF2615	0.24	-0.9
2,636,965	-		GFF2615	0.24	+0.1
2,636,965	-		GFF2615	0.24	-1.7
2,636,965	-		GFF2615	0.24	-0.9
2,636,965	-		GFF2615	0.24	-0.3
2,636,965	-		GFF2615	0.24	+0.3
2,636,965	-		GFF2615	0.24	-1.0
2,636,965	-		GFF2615	0.24	-0.4
2,636,965	-		GFF2615	0.24	-1.0
2,636,965	-		GFF2615	0.24	+0.2
2,636,965	-		GFF2615	0.24	-0.3
2,636,965	-		GFF2615	0.24	+0.2
2,636,965	-		GFF2615	0.24	+0.7
2,636,974	+		GFF2615	0.25	+0.2
2,636,974	+		GFF2615	0.25	+1.3
2,636,974	+		GFF2615	0.25	-0.9
2,636,980	-		GFF2615	0.26	+0.8
2,636,982	-		GFF2615	0.26	+1.7
2,636,982	-		GFF2615	0.26	-1.6
2,636,987	-		GFF2615	0.26	+0.5
2,637,008	+		GFF2615	0.29	-2.3
2,637,016	+		GFF2615	0.30	-0.3
2,637,025	-		GFF2615	0.31	+0.4
2,637,032	+		GFF2615	0.32	+0.5
2,637,032	+		GFF2615	0.32	-2.3
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