Strain Fitness in Sphingobium sp. HT1-2 around GFF2502

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,525,114	-		GFF2501	0.29	-1.1
2,525,139	-		GFF2501	0.30	-0.5
2,525,147	-		GFF2501	0.31	-1.2
2,525,147	-		GFF2501	0.31	+0.7
2,525,169	+		GFF2501	0.33	+0.6
2,525,182	-		GFF2501	0.34	-0.2
2,525,182	-		GFF2501	0.34	-0.6
2,525,216	+		GFF2501	0.36	-0.8
2,525,224	-		GFF2501	0.37	+0.8
2,525,224	-		GFF2501	0.37	-0.8
2,525,228	+		GFF2501	0.37	-1.6
2,525,229	-		GFF2501	0.37	-1.0
2,525,254	+		GFF2501	0.39	-0.2
2,525,278	+		GFF2501	0.41	-1.1
2,525,278	+		GFF2501	0.41	+0.5
2,525,286	-		GFF2501	0.41	-1.7
2,525,333	-		GFF2501	0.45	+0.1
2,525,335	+		GFF2501	0.45	-2.5
2,525,335	+		GFF2501	0.45	+0.6
2,525,343	-		GFF2501	0.46	-1.2
2,525,343	-		GFF2501	0.46	-1.2
2,525,343	-		GFF2501	0.46	+0.6
2,525,343	-		GFF2501	0.46	+0.4
2,525,343	-		GFF2501	0.46	-0.4
2,525,346	+		GFF2501	0.46	-0.8
2,525,393	+		GFF2501	0.49	+2.1
2,525,393	+		GFF2501	0.49	+0.4
2,525,394	-		GFF2501	0.50	+0.6
2,525,396	-		GFF2501	0.50	-0.2
2,525,401	-		GFF2501	0.50	-1.9
2,525,401	-		GFF2501	0.50	-0.6
2,525,404	+		GFF2501	0.50	-0.1
2,525,416	+		GFF2501	0.51	-1.4
2,525,426	-		GFF2501	0.52	-2.5
2,525,431	+		GFF2501	0.52	+0.1
2,525,431	+		GFF2501	0.52	-1.2
2,525,431	+		GFF2501	0.52	-1.6
2,525,431	+		GFF2501	0.52	+0.8
2,525,431	+		GFF2501	0.52	-0.3
2,525,431	+		GFF2501	0.52	-0.7
2,525,431	+		GFF2501	0.52	-0.1
2,525,435	+		GFF2501	0.53	-1.2
2,525,439	-		GFF2501	0.53	+0.0
2,525,439	-		GFF2501	0.53	-0.4
2,525,439	-		GFF2501	0.53	-0.6
2,525,439	-		GFF2501	0.53	+1.3
2,525,439	-		GFF2501	0.53	+0.4
2,525,439	-		GFF2501	0.53	-0.8
2,525,439	-		GFF2501	0.53	+0.3
2,525,439	-		GFF2501	0.53	-1.5
2,525,439	-		GFF2501	0.53	+0.9
2,525,439	-		GFF2501	0.53	-1.3
2,525,455	+		GFF2501	0.54	-1.2
2,525,467	+		GFF2501	0.55	-0.2
2,525,467	+		GFF2501	0.55	-0.8
2,525,502	-		GFF2501	0.58	-0.5
2,525,512	+		GFF2501	0.58	-0.8
2,525,514	+		GFF2501	0.59	-0.5
2,525,520	-		GFF2501	0.59	-0.2
2,525,528	+		GFF2501	0.60	-1.5
2,525,536	-		GFF2501	0.60	+0.8
2,525,536	-		GFF2501	0.60	-0.5
2,525,567	+		GFF2501	0.62	+1.1
2,525,577	+		GFF2501	0.63	+0.4
2,525,580	-		GFF2501	0.63	+0.2
2,525,587	+		GFF2501	0.64	-0.7
2,525,593	+		GFF2501	0.64	-0.7
2,525,594	+		GFF2501	0.64	-0.6
2,525,594	+		GFF2501	0.64	-1.9
2,525,595	-		GFF2501	0.65	-0.1
2,525,603	+		GFF2501	0.65	-0.6
2,525,656	+		GFF2501	0.69	-0.1
2,525,667	+		GFF2501	0.70	-0.4
2,525,674	+		GFF2501	0.70	-0.9
2,525,675	-		GFF2501	0.71	+1.4
2,525,675	-		GFF2501	0.71	-0.6
2,525,728	+		GFF2501	0.75	-1.3
2,525,742	-		GFF2501	0.76	+0.9
2,525,758	-		GFF2501	0.77	+1.2
2,525,758	-		GFF2501	0.77	-1.1
2,525,778	-		GFF2501	0.78	-1.0
2,525,811	+		GFF2501	0.81	-2.2
2,525,816	-		GFF2501	0.81	+0.6
2,525,832	+		GFF2501	0.82	-1.5
2,525,832	+		GFF2501	0.82	+1.0
2,525,832	+		GFF2501	0.82	-2.5
2,525,835	-		GFF2501	0.83	-1.5
2,525,844	+		GFF2501	0.83	+1.0
2,525,849	+		GFF2501	0.84	-0.8
2,525,861	-		GFF2501	0.84	+0.7
2,525,874	+		GFF2501	0.85	+0.6
2,525,887	+		GFF2501	0.86	-0.8
2,525,887	-		GFF2501	0.86	-1.0
2,525,921	-		GFF2501	0.89	-2.1
2,525,962	+				-0.4
2,526,027	-				+0.2
2,526,053	+				+0.9
2,526,060	+				-0.9
2,526,060	+				-2.5
2,526,060	+				-0.4
2,526,062	+				-1.5
2,526,062	+				+0.1
2,526,068	-				-0.6
2,526,068	-				+0.4
2,526,091	+				+0.0
2,526,099	-				-0.8
2,526,101	+				-0.7
2,526,101	+				+1.0
2,526,104	-				-1.4
2,526,109	-				-1.0
2,526,113	+				-1.6
2,526,119	-				-0.0
2,526,121	-				-0.7
2,526,121	-				-0.7
2,526,128	+				-0.7
2,526,131	-				-1.1
2,526,133	+				-1.2
2,526,141	-		GFF2502	0.11	+1.0
2,526,148	-		GFF2502	0.12	-0.5
2,526,148	-		GFF2502	0.12	-0.5
2,526,161	+		GFF2502	0.14	+0.1
2,526,174	+		GFF2502	0.15	-0.4
2,526,193	+		GFF2502	0.18	-0.0
2,526,201	-		GFF2502	0.19	-0.4
2,526,201	-		GFF2502	0.19	+1.5
2,526,236	+		GFF2502	0.24	-0.2
2,526,269	+		GFF2502	0.29	-0.8
2,526,271	+		GFF2502	0.29	-2.1
2,526,277	-		GFF2502	0.30	-1.2
2,526,277	-		GFF2502	0.30	+0.3
2,526,279	+		GFF2502	0.30	-0.7
2,526,279	-		GFF2502	0.30	-1.1
2,526,279	-		GFF2502	0.30	-0.5
2,526,290	+		GFF2502	0.32	+0.0
2,526,307	+		GFF2502	0.34	-0.8
2,526,352	+		GFF2502	0.41	+1.3
2,526,403	-		GFF2502	0.48	-0.9
2,526,416	-		GFF2502	0.50	+1.0
2,526,418	+		GFF2502	0.50	-0.4
2,526,418	+		GFF2502	0.50	-0.3
2,526,418	+		GFF2502	0.50	-0.0
2,526,418	+		GFF2502	0.50	+0.5
2,526,426	-		GFF2502	0.51	+0.2
2,526,426	-		GFF2502	0.51	-0.5
2,526,426	-		GFF2502	0.51	+0.3
2,526,426	-		GFF2502	0.51	+1.3
2,526,426	-		GFF2502	0.51	+0.4
2,526,426	-		GFF2502	0.51	-0.7
2,526,464	+		GFF2502	0.56	+1.2
2,526,472	-		GFF2502	0.57	-0.5
2,526,487	+		GFF2502	0.59	-0.9
2,526,492	+		GFF2502	0.60	-1.3
2,526,492	+		GFF2502	0.60	-2.0
2,526,492	+		GFF2502	0.60	-0.2
2,526,515	+		GFF2502	0.63	-0.8
2,526,523	-		GFF2502	0.65	+0.3
2,526,525	+		GFF2502	0.65	-2.1
2,526,525	+		GFF2502	0.65	-1.0
2,526,533	-		GFF2502	0.66	-1.7
2,526,535	+		GFF2502	0.66	-1.4
2,526,535	+		GFF2502	0.66	-0.6
2,526,543	-		GFF2502	0.67	+0.6
2,526,567	-		GFF2502	0.71	-1.0
2,526,568	+		GFF2502	0.71	-2.1
2,526,582	+		GFF2502	0.73	-0.4
2,526,582	+		GFF2502	0.73	-0.4
2,526,585	-		GFF2502	0.73	+0.2
2,526,596	+		GFF2502	0.75	-0.6
2,526,596	+		GFF2502	0.75	+1.8
2,526,596	+		GFF2502	0.75	-0.4
2,526,596	+		GFF2502	0.75	-1.0
2,526,612	+		GFF2502	0.77	-1.0
2,526,630	-		GFF2502	0.80	+0.8
2,526,635	-		GFF2502	0.80	+1.5
2,526,644	-		GFF2502	0.82	-0.1
2,526,651	-		GFF2502	0.83	-1.1
2,526,688	-		GFF2502	0.88	-1.8
2,526,695	-		GFF2502	0.89	-0.9
2,526,695	-		GFF2502	0.89	+0.5
2,526,695	-		GFF2502	0.89	+1.1
2,526,710	-				-0.2
2,526,730	-				+0.6
2,526,742	+				+0.2
2,526,765	-				-1.9
2,526,765	-				+0.6
2,526,773	-				+2.1
2,526,778	-				-0.2
2,526,778	-				-0.6
2,526,780	+				-0.2
2,526,785	+				-0.3
2,526,785	+				-1.3
2,526,785	+				-1.6
2,526,788	-				+1.3
2,526,788	-				+0.4
2,526,788	-				+0.3
2,526,788	-				-0.5
2,526,793	-				-1.5
2,526,793	-				-0.5
2,526,793	-				-0.9
2,526,793	-				-0.7
2,526,793	-				+0.8
2,526,793	-				-1.0
2,526,795	+				-1.1
2,526,795	+				-1.4
2,526,803	-				-1.5
2,526,804	+				+0.9
2,526,809	+				-0.6
2,526,812	-				+0.3
2,526,812	-				+0.8
2,526,817	-				-0.4
2,526,825	+				-1.4
2,526,829	-				-0.6
2,526,831	-				-1.1
2,526,873	+				+0.1
2,526,900	+				-1.0
2,526,905	+				+0.5
2,526,913	-				-1.2
2,526,932	+				-0.0
2,526,940	-				-0.2
2,526,940	-				-1.9
2,526,940	-				+0.8
2,526,942	+				+0.6
2,526,942	+				+0.5
2,526,951	+				-0.6
2,526,951	+				-0.5
2,526,951	+				-0.6
2,526,951	+				-1.0
2,526,959	-				-0.6
2,526,994	+				-1.0
2,526,996	+				+0.0
2,527,004	-				-0.2
2,527,088	+		GFF2503	0.14	-0.6
2,527,138	+		GFF2503	0.20	-1.7
2,527,138	+		GFF2503	0.20	-0.2
2,527,138	+		GFF2503	0.20	-0.0
2,527,138	+		GFF2503	0.20	-1.0
2,527,138	+		GFF2503	0.20	-1.6
2,527,138	+		GFF2503	0.20	-1.5
2,527,138	+		GFF2503	0.20	+1.2
2,527,138	+		GFF2503	0.20	+0.4
2,527,138	+		GFF2503	0.20	-0.4
2,527,138	+		GFF2503	0.20	-0.0
2,527,143	+		GFF2503	0.21	-1.3
2,527,143	+		GFF2503	0.21	-0.0
2,527,146	-		GFF2503	0.21	+2.1
2,527,146	-		GFF2503	0.21	-0.5
2,527,146	-		GFF2503	0.21	-1.0
2,527,146	-		GFF2503	0.21	-0.5
2,527,146	-		GFF2503	0.21	-1.2
2,527,146	-		GFF2503	0.21	-0.3
2,527,146	-		GFF2503	0.21	-0.8
2,527,146	-		GFF2503	0.21	-1.1
2,527,146	-		GFF2503	0.21	-1.1
2,527,146	-		GFF2503	0.21	-1.3
2,527,155	-		GFF2503	0.22	-1.6
2,527,155	-		GFF2503	0.22	+0.5
2,527,198	+		GFF2503	0.27	-1.6
2,527,201	-		GFF2503	0.28	+0.5
2,527,206	-		GFF2503	0.28	-0.9
2,527,206	-		GFF2503	0.28	-0.8
2,527,226	+		GFF2503	0.31	-2.5
2,527,226	+		GFF2503	0.31	-1.1
2,527,226	+		GFF2503	0.31	-0.2
2,527,226	+		GFF2503	0.31	-0.7
2,527,226	+		GFF2503	0.31	-0.0
2,527,226	+		GFF2503	0.31	+0.6
2,527,226	+		GFF2503	0.31	+0.1
2,527,226	+		GFF2503	0.31	-0.6
2,527,229	-		GFF2503	0.31	+0.1
2,527,229	-		GFF2503	0.31	+0.1
2,527,234	-		GFF2503	0.32	-0.3
2,527,234	-		GFF2503	0.32	-0.1
2,527,234	-		GFF2503	0.32	-0.8
2,527,234	-		GFF2503	0.32	+1.8
2,527,234	-		GFF2503	0.32	+0.9
2,527,234	-		GFF2503	0.32	-1.1
2,527,234	-		GFF2503	0.32	+0.9
2,527,237	+		GFF2503	0.32	+0.9
2,527,237	+		GFF2503	0.32	+0.3
2,527,237	+		GFF2503	0.32	+0.6
2,527,237	+		GFF2503	0.32	-0.9
2,527,245	-		GFF2503	0.33	-2.0
2,527,245	-		GFF2503	0.33	-0.2
2,527,245	-		GFF2503	0.33	-0.1
2,527,245	-		GFF2503	0.33	-0.4
2,527,245	-		GFF2503	0.33	-2.0
2,527,246	+		GFF2503	0.33	-1.2
2,527,248	+		GFF2503	0.33	-1.4
2,527,255	-		GFF2503	0.34	-0.2
2,527,256	+		GFF2503	0.34	-0.6
2,527,256	+		GFF2503	0.34	+0.8
2,527,261	+		GFF2503	0.35	+0.0
2,527,261	+		GFF2503	0.35	-2.2
2,527,261	+		GFF2503	0.35	-0.1
2,527,261	+		GFF2503	0.35	-0.5
2,527,262	-		GFF2503	0.35	-0.0
2,527,266	+		GFF2503	0.35	-0.3
2,527,277	-		GFF2503	0.37	+0.4
2,527,281	+		GFF2503	0.37	-0.1
2,527,314	+		GFF2503	0.41	+2.2
2,527,322	-		GFF2503	0.42	-0.8
2,527,326	+		GFF2503	0.42	+0.6
2,527,338	+		GFF2503	0.44	-0.0
2,527,346	-		GFF2503	0.45	-1.1
2,527,349	-		GFF2503	0.45	-1.2
2,527,360	+		GFF2503	0.47	-1.0
2,527,373	+		GFF2503	0.48	+0.9
2,527,373	+		GFF2503	0.48	-0.5
2,527,374	-		GFF2503	0.48	+1.2
2,527,381	-		GFF2503	0.49	+1.6
2,527,381	-		GFF2503	0.49	-1.0
2,527,388	+		GFF2503	0.50	-2.0
2,527,388	+		GFF2503	0.50	-1.5
2,527,388	+		GFF2503	0.50	+0.1
2,527,388	+		GFF2503	0.50	-0.0
2,527,388	+		GFF2503	0.50	-1.5
2,527,388	+		GFF2503	0.50	+0.3
2,527,388	+		GFF2503	0.50	-1.0
2,527,388	+		GFF2503	0.50	+0.7
2,527,388	+		GFF2503	0.50	-1.2
2,527,388	+		GFF2503	0.50	-0.2
2,527,388	+		GFF2503	0.50	+1.1
2,527,394	+		GFF2503	0.51	-0.3
2,527,394	+		GFF2503	0.51	+0.6
2,527,394	+		GFF2503	0.51	-1.1
2,527,395	+		GFF2503	0.51	+0.8
2,527,395	+		GFF2503	0.51	-0.2
2,527,395	+		GFF2503	0.51	-0.6
2,527,395	+		GFF2503	0.51	+0.0
2,527,396	-		GFF2503	0.51	-1.2
2,527,396	-		GFF2503	0.51	-1.2
2,527,396	-		GFF2503	0.51	-1.2
2,527,396	-		GFF2503	0.51	-1.6
2,527,396	-		GFF2503	0.51	-0.0
2,527,402	-		GFF2503	0.51	-0.5
2,527,402	-		GFF2503	0.51	-1.0
2,527,402	-		GFF2503	0.51	-0.9
2,527,402	-		GFF2503	0.51	-0.4
2,527,402	-		GFF2503	0.51	-0.2
2,527,403	-		GFF2503	0.52	+0.7
2,527,403	-		GFF2503	0.52	-1.5
2,527,403	-		GFF2503	0.52	+0.7
2,527,404	+		GFF2503	0.52	-0.2
2,527,412	-		GFF2503	0.53	-0.4
2,527,417	-		GFF2503	0.53	+1.1
2,527,418	+		GFF2503	0.53	-1.3
2,527,423	+		GFF2503	0.54	+0.9
2,527,423	+		GFF2503	0.54	+0.7
2,527,423	+		GFF2503	0.54	+1.1
2,527,428	+		GFF2503	0.55	-2.7
2,527,429	+		GFF2503	0.55	+0.1
2,527,431	-		GFF2503	0.55	-1.5
2,527,431	-		GFF2503	0.55	-1.0
2,527,431	-		GFF2503	0.55	-0.9
2,527,433	+		GFF2503	0.55	-0.1
2,527,468	+		GFF2503	0.59	-0.4
2,527,472	+		GFF2503	0.60	-1.0
2,527,480	-		GFF2503	0.61	-0.4
2,527,486	+		GFF2503	0.61	+0.0
2,527,489	-		GFF2503	0.62	-1.0
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2,527,740	+				+1.2
2,527,757	+				-0.1
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2,527,773	+				-0.5