Strain Fitness in Sphingobium sp. HT1-2 around GFF2464

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,485,338	-		GFF2463	0.54	-0.4
2,485,348	+		GFF2463	0.55	+1.0
2,485,348	+		GFF2463	0.55	-1.1
2,485,356	-		GFF2463	0.55	+0.4
2,485,362	-		GFF2463	0.56	-0.2
2,485,362	-		GFF2463	0.56	-1.2
2,485,404	+		GFF2463	0.58	-0.5
2,485,420	+		GFF2463	0.59	+0.6
2,485,425	+		GFF2463	0.60	-1.2
2,485,436	-		GFF2463	0.61	-0.2
2,485,442	+		GFF2463	0.61	-2.5
2,485,442	+		GFF2463	0.61	-0.8
2,485,450	-		GFF2463	0.61	+0.8
2,485,450	-		GFF2463	0.61	-1.5
2,485,450	-		GFF2463	0.61	-0.7
2,485,450	-		GFF2463	0.61	-2.5
2,485,450	-		GFF2463	0.61	+0.5
2,485,451	-		GFF2463	0.62	-0.7
2,485,478	+		GFF2463	0.63	-0.6
2,485,506	+		GFF2463	0.65	-0.0
2,485,506	+		GFF2463	0.65	-0.1
2,485,506	+		GFF2463	0.65	+0.3
2,485,506	+		GFF2463	0.65	-0.6
2,485,506	+		GFF2463	0.65	+0.1
2,485,506	+		GFF2463	0.65	-0.9
2,485,506	+		GFF2463	0.65	-0.6
2,485,511	+		GFF2463	0.66	-0.1
2,485,511	+		GFF2463	0.66	+1.3
2,485,511	+		GFF2463	0.66	+0.2
2,485,511	+		GFF2463	0.66	+0.3
2,485,511	+		GFF2463	0.66	-1.0
2,485,511	+		GFF2463	0.66	-0.7
2,485,511	+		GFF2463	0.66	-0.2
2,485,511	+		GFF2463	0.66	+0.4
2,485,511	+		GFF2463	0.66	+0.1
2,485,511	+		GFF2463	0.66	+0.8
2,485,511	+		GFF2463	0.66	-1.3
2,485,511	+		GFF2463	0.66	-0.8
2,485,511	+		GFF2463	0.66	-0.4
2,485,511	+		GFF2463	0.66	-1.5
2,485,511	+		GFF2463	0.66	+1.1
2,485,511	+		GFF2463	0.66	+0.5
2,485,511	+		GFF2463	0.66	+0.7
2,485,511	+		GFF2463	0.66	-0.4
2,485,514	-		GFF2463	0.66	+0.3
2,485,514	-		GFF2463	0.66	-0.7
2,485,514	-		GFF2463	0.66	+1.0
2,485,519	-		GFF2463	0.66	+0.3
2,485,519	-		GFF2463	0.66	-1.4
2,485,519	-		GFF2463	0.66	+0.3
2,485,519	-		GFF2463	0.66	-0.0
2,485,519	-		GFF2463	0.66	+0.1
2,485,519	-		GFF2463	0.66	-2.0
2,485,519	-		GFF2463	0.66	+0.7
2,485,519	-		GFF2463	0.66	-0.1
2,485,519	-		GFF2463	0.66	-0.7
2,485,519	-		GFF2463	0.66	-0.3
2,485,519	-		GFF2463	0.66	+0.9
2,485,535	-		GFF2463	0.67	-0.7
2,485,539	+		GFF2463	0.67	+1.0
2,485,541	+		GFF2463	0.68	-0.6
2,485,542	-		GFF2463	0.68	-0.6
2,485,569	+		GFF2463	0.69	-0.6
2,485,572	+		GFF2463	0.70	-0.5
2,485,572	+		GFF2463	0.70	-0.9
2,485,580	-		GFF2463	0.70	-0.5
2,485,580	-		GFF2463	0.70	-1.2
2,485,580	-		GFF2463	0.70	+1.2
2,485,587	-		GFF2463	0.71	+0.1
2,485,593	+		GFF2463	0.71	-1.0
2,485,594	+		GFF2463	0.71	-0.5
2,485,604	-		GFF2463	0.72	-0.6
2,485,618	+		GFF2463	0.73	-0.4
2,485,618	+		GFF2463	0.73	-0.8
2,485,618	+		GFF2463	0.73	+1.5
2,485,618	+		GFF2463	0.73	+0.2
2,485,618	+		GFF2463	0.73	-0.3
2,485,623	+		GFF2463	0.73	+0.1
2,485,631	-		GFF2463	0.74	-1.2
2,485,644	+		GFF2463	0.75	+1.4
2,485,644	-		GFF2463	0.75	-1.5
2,485,673	+		GFF2463	0.76	-0.4
2,485,681	-		GFF2463	0.77	-0.6
2,485,683	+		GFF2463	0.77	-0.3
2,485,697	+		GFF2463	0.78	+0.5
2,485,697	+		GFF2463	0.78	-0.3
2,485,700	-		GFF2463	0.78	-1.5
2,485,705	-		GFF2463	0.79	-1.2
2,485,705	-		GFF2463	0.79	+0.2
2,485,724	-		GFF2463	0.80	-1.5
2,485,774	+		GFF2463	0.83	-0.3
2,485,780	-		GFF2463	0.84	+0.9
2,485,797	-		GFF2463	0.85	+0.8
2,485,799	-		GFF2463	0.85	+0.6
2,485,799	-		GFF2463	0.85	-1.0
2,485,802	+		GFF2463	0.85	-0.6
2,485,831	-		GFF2463	0.87	+0.2
2,485,840	+		GFF2463	0.88	+0.5
2,485,840	+		GFF2463	0.88	-1.9
2,485,841	+		GFF2463	0.88	+0.6
2,485,849	-		GFF2463	0.88	+0.4
2,485,860	-		GFF2463	0.89	+0.3
2,485,862	+		GFF2463	0.89	-0.5
2,485,862	+		GFF2463	0.89	-0.1
2,485,862	+		GFF2463	0.89	-1.3
2,485,862	+		GFF2463	0.89	-0.5
2,485,862	+		GFF2463	0.89	-1.5
2,485,862	+		GFF2463	0.89	+1.2
2,485,862	+		GFF2463	0.89	+0.8
2,485,862	+		GFF2463	0.89	+0.3
2,485,862	+		GFF2463	0.89	-1.7
2,485,870	-		GFF2463	0.90	+0.8
2,485,870	-		GFF2463	0.90	-0.1
2,485,870	-		GFF2463	0.90	-1.1
2,485,870	-		GFF2463	0.90	-2.2
2,485,870	-		GFF2463	0.90	-2.2
2,485,870	-		GFF2463	0.90	-0.4
2,485,870	-		GFF2463	0.90	-1.2
2,485,870	-		GFF2463	0.90	-1.5
2,485,870	-		GFF2463	0.90	+0.6
2,485,870	-		GFF2463	0.90	-0.7
2,485,870	-		GFF2463	0.90	-1.3
2,485,870	-		GFF2463	0.90	+0.1
2,485,870	-		GFF2463	0.90	-0.7
2,485,874	+				-1.3
2,485,930	+				-0.7
2,485,940	+				+0.6
2,485,940	+				+0.8
2,485,940	+				-1.6
2,485,948	-				-0.2
2,486,009	-				+0.2
2,486,024	-				-1.3
2,486,036	+				-0.2
2,486,036	+				-2.0
2,486,076	+				-0.8
2,486,084	-				-1.7
2,486,084	-				-0.6
2,486,105	+				+0.2
2,486,105	+				-0.5
2,486,121	-				-1.6
2,486,126	+				-0.5
2,486,130	-				-0.7
2,486,131	+				+1.2
2,486,132	+				-1.7
2,486,140	-				-1.2
2,486,141	-				+1.8
2,486,155	+				-0.9
2,486,155	+				+1.9
2,486,155	+				-0.8
2,486,155	+				-1.5
2,486,155	+				-0.2
2,486,155	+				+0.3
2,486,163	-				-1.9
2,486,163	-				+0.8
2,486,163	-				-0.6
2,486,163	-				+1.1
2,486,167	+				-0.4
2,486,179	+				-0.8
2,486,179	+				+0.1
2,486,179	+				-0.9
2,486,179	+				+0.3
2,486,187	-				-2.0
2,486,187	-				+0.1
2,486,187	-				+1.0
2,486,187	-				-1.3
2,486,187	-				+1.8
2,486,187	-				+0.8
2,486,187	-				+0.4
2,486,187	-				-0.7
2,486,199	+				-1.5
2,486,199	+				-1.0
2,486,252	-				+1.2
2,486,265	+				+0.5
2,486,265	+				-0.4
2,486,265	+				-1.4
2,486,265	+				-0.2
2,486,266	+				+0.4
2,486,273	-				-1.3
2,486,273	-				-1.2
2,486,274	-				-0.7
2,486,274	-				-0.0
2,486,274	-				+0.2
2,486,293	+				-0.8
2,486,293	+				-2.0
2,486,293	+				-0.2
2,486,293	+				-0.6
2,486,293	+				-0.9
2,486,293	+				-0.2
2,486,293	+				-1.0
2,486,293	+				-0.1
2,486,293	+				-1.2
2,486,293	+				-0.8
2,486,293	+				+0.0
2,486,293	+				+0.5
2,486,293	+				-1.5
2,486,293	+				+0.5
2,486,293	+				+0.2
2,486,296	-				-1.7
2,486,298	+				-1.7
2,486,299	-				-0.5
2,486,301	-				-0.4
2,486,301	-				-0.8
2,486,301	-				-0.7
2,486,301	-				-1.6
2,486,301	-				-0.7
2,486,301	-				-0.8
2,486,301	-				+0.7
2,486,301	-				-1.2
2,486,301	-				-0.7
2,486,303	+				+0.0
2,486,306	-				+1.1
2,486,311	-				-1.7
2,486,335	+				-0.4
2,486,338	-				-0.5
2,486,340	+				-0.7
2,486,340	+				-0.9
2,486,340	+				-0.7
2,486,340	+				-1.0
2,486,340	+				-0.4
2,486,342	+				-0.6
2,486,346	+				-0.3
2,486,348	-				-0.1
2,486,348	-				-0.5
2,486,348	-				-0.7
2,486,348	-				-0.6
2,486,348	-				-1.0
2,486,348	-				+0.5
2,486,351	+				-1.6
2,486,351	+				-0.8
2,486,359	-				+2.0
2,486,361	+				-1.4
2,486,379	+				+0.0
2,486,397	-				-0.2
2,486,405	-				+0.3
2,486,409	+				+0.9
2,486,415	+				-2.0
2,486,416	+				-1.2
2,486,417	-				-0.2
2,486,417	-				-1.8
2,486,430	-				-1.2
2,486,443	+				+0.4
2,486,445	+				+1.0
2,486,445	+				-2.0
2,486,445	+				+0.5
2,486,445	+				+0.2
2,486,445	+				-1.5
2,486,445	+				-1.1
2,486,445	+				-2.4
2,486,445	+				-0.6
2,486,445	+				-1.1
2,486,445	+				+1.4
2,486,445	+				-1.1
2,486,445	+				-0.9
2,486,445	+				-0.8
2,486,445	+				+0.3
2,486,445	+				-1.3
2,486,445	+				+0.8
2,486,445	+				-1.9
2,486,453	-				-0.8
2,486,453	-				-0.6
2,486,453	-				+1.7
2,486,453	-				+1.3
2,486,453	-				+0.0
2,486,453	-				-0.0
2,486,453	-				+0.1
2,486,453	-				-0.0
2,486,453	-				-1.5
2,486,453	-				-0.4
2,486,453	-				-0.9
2,486,453	-				+0.5
2,486,453	-				+1.1
2,486,453	-				-0.2
2,486,453	-				-2.1
2,486,453	-				-0.6
2,486,453	-				-0.6
2,486,453	-				-0.2
2,486,453	-				-0.3
2,486,453	-				-0.5
2,486,453	-				+1.0
2,486,465	+				-0.8
2,486,465	+				-0.4
2,486,468	-				-1.8
2,486,473	-				-1.2
2,486,473	-				-0.8
2,486,487	+				-1.2
2,486,492	+				-1.0
2,486,492	+				+0.8
2,486,492	+				+0.6
2,486,492	+				-1.8
2,486,547	+				-0.4
2,486,547	+				-1.0
2,486,547	+				+1.6
2,486,555	-				-0.2
2,486,561	+				-0.6
2,486,569	-				+0.5
2,486,569	-				-2.0
2,486,569	-				+0.3
2,486,581	-				+0.4
2,486,593	+				-1.0
2,486,625	-		GFF2464	0.11	+0.3
2,486,627	+		GFF2464	0.11	+0.7
2,486,627	+		GFF2464	0.11	+0.6
2,486,632	+		GFF2464	0.11	+2.1
2,486,639	+		GFF2464	0.11	-0.7
2,486,640	-		GFF2464	0.11	-1.5
2,486,649	+		GFF2464	0.12	-0.5
2,486,660	+		GFF2464	0.12	-0.9
2,486,662	+		GFF2464	0.12	-1.8
2,486,667	+		GFF2464	0.12	-0.8
2,486,670	-		GFF2464	0.12	-0.2
2,486,670	-		GFF2464	0.12	-1.5
2,486,670	-		GFF2464	0.12	-0.8
2,486,674	-		GFF2464	0.12	-0.7
2,486,692	+		GFF2464	0.13	-0.8
2,486,706	-		GFF2464	0.14	-0.8
2,486,715	+		GFF2464	0.14	+0.1
2,486,715	+		GFF2464	0.14	-1.0
2,486,723	-		GFF2464	0.14	-1.6
2,486,731	+		GFF2464	0.14	-0.4
2,486,745	+		GFF2464	0.15	-1.9
2,486,745	+		GFF2464	0.15	+0.9
2,486,752	+		GFF2464	0.15	+0.1
2,486,756	+		GFF2464	0.15	-0.4
2,486,773	-		GFF2464	0.16	-1.5
2,486,791	+		GFF2464	0.16	-0.5
2,486,791	+		GFF2464	0.16	+0.8
2,486,791	+		GFF2464	0.16	+0.4
2,486,791	+		GFF2464	0.16	-0.5
2,486,791	+		GFF2464	0.16	-0.6
2,486,791	+		GFF2464	0.16	-0.4
2,486,791	+		GFF2464	0.16	+0.9
2,486,791	+		GFF2464	0.16	-1.1
2,486,791	+		GFF2464	0.16	-1.2
2,486,796	+		GFF2464	0.17	-1.0
2,486,799	-		GFF2464	0.17	-0.4
2,486,799	-		GFF2464	0.17	+0.4
2,486,799	-		GFF2464	0.17	+2.2
2,486,799	-		GFF2464	0.17	-0.7
2,486,799	-		GFF2464	0.17	+0.6
2,486,799	-		GFF2464	0.17	-0.5
2,486,801	+		GFF2464	0.17	-0.5
2,486,801	+		GFF2464	0.17	-0.4
2,486,801	+		GFF2464	0.17	-1.3
2,486,804	-		GFF2464	0.17	+0.8
2,486,809	-		GFF2464	0.17	-1.1
2,486,809	-		GFF2464	0.17	+0.5
2,486,809	-		GFF2464	0.17	-0.1
2,486,810	-		GFF2464	0.17	+0.3
2,486,842	-		GFF2464	0.18	+0.2
2,486,858	+		GFF2464	0.19	-2.1
2,486,873	+		GFF2464	0.19	+0.0
2,486,873	+		GFF2464	0.19	-0.2
2,486,873	+		GFF2464	0.19	-1.5
2,486,873	+		GFF2464	0.19	-1.0
2,486,873	+		GFF2464	0.19	-0.8
2,486,873	+		GFF2464	0.19	-1.0
2,486,873	+		GFF2464	0.19	+1.7
2,486,881	-		GFF2464	0.19	+1.1
2,486,881	-		GFF2464	0.19	+1.3
2,486,881	-		GFF2464	0.19	-1.4
2,486,881	-		GFF2464	0.19	+0.2
2,486,881	-		GFF2464	0.19	+0.3
2,486,881	-		GFF2464	0.19	-0.4
2,486,881	-		GFF2464	0.19	-0.9
2,486,892	+		GFF2464	0.20	-1.4
2,486,914	+		GFF2464	0.21	-0.0
2,486,922	+		GFF2464	0.21	-0.8
2,486,922	-		GFF2464	0.21	+0.4
2,486,924	+		GFF2464	0.21	-1.0
2,486,930	-		GFF2464	0.21	+0.3
2,486,943	-		GFF2464	0.22	-0.2
2,486,964	+		GFF2464	0.22	+0.2
2,486,964	+		GFF2464	0.22	-1.0
2,486,964	+		GFF2464	0.22	+1.8
2,486,964	+		GFF2464	0.22	-1.0
2,486,964	-		GFF2464	0.22	-1.8
2,486,972	-		GFF2464	0.23	+0.1
2,486,972	-		GFF2464	0.23	-0.4
2,486,972	-		GFF2464	0.23	-0.2
2,487,012	-		GFF2464	0.24	+0.4
2,487,027	-		GFF2464	0.24	-1.2
2,487,027	-		GFF2464	0.24	+0.4
2,487,032	-		GFF2464	0.25	-0.9
2,487,039	-		GFF2464	0.25	-0.6
2,487,052	+		GFF2464	0.25	-0.5
2,487,070	+		GFF2464	0.26	-0.6
2,487,079	+		GFF2464	0.26	-0.2
2,487,094	+		GFF2464	0.27	-1.7
2,487,102	-		GFF2464	0.27	-2.0
2,487,102	-		GFF2464	0.27	-0.5
2,487,156	+		GFF2464	0.29	+0.4
2,487,157	-		GFF2464	0.29	+0.4
2,487,166	+		GFF2464	0.29	+0.4
2,487,180	-		GFF2464	0.30	-0.2
2,487,192	+		GFF2464	0.30	-0.7
2,487,199	+		GFF2464	0.30	-1.5
2,487,200	-		GFF2464	0.30	+1.5
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2,487,445	-		GFF2464	0.39	-1.3
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2,487,445	-		GFF2464	0.39	-1.0
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