Strain Fitness in Sphingobium sp. HT1-2 around GFF1709

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,733,064	-				-0.7
1,733,066	-				-1.1
1,733,133	+				-1.2
1,733,133	+				-0.7
1,733,151	-				-0.7
1,733,170	-				+0.4
1,733,172	+				+0.0
1,733,225	-		GFF1708	0.18	-1.1
1,733,233	+		GFF1708	0.21	-1.9
1,733,233	+		GFF1708	0.21	+0.5
1,733,233	+		GFF1708	0.21	-0.5
1,733,233	+		GFF1708	0.21	-2.3
1,733,233	+		GFF1708	0.21	-0.7
1,733,233	+		GFF1708	0.21	-0.7
1,733,233	+		GFF1708	0.21	-0.6
1,733,233	+		GFF1708	0.21	+0.7
1,733,233	+		GFF1708	0.21	+1.6
1,733,241	-		GFF1708	0.23	-0.7
1,733,241	-		GFF1708	0.23	+1.2
1,733,243	+		GFF1708	0.24	+0.2
1,733,256	+		GFF1708	0.27	-0.8
1,733,256	+		GFF1708	0.27	-1.4
1,733,256	+		GFF1708	0.27	+0.4
1,733,256	+		GFF1708	0.27	+0.6
1,733,257	+		GFF1708	0.28	-0.5
1,733,259	-		GFF1708	0.28	-1.6
1,733,301	-		GFF1708	0.41	-0.8
1,733,301	-		GFF1708	0.41	-1.1
1,733,301	-		GFF1708	0.41	+0.7
1,733,302	+		GFF1708	0.41	+1.5
1,733,302	+		GFF1708	0.41	+0.3
1,733,310	-		GFF1708	0.43	-1.8
1,733,310	-		GFF1708	0.43	-0.2
1,733,310	-		GFF1708	0.43	+0.7
1,733,312	+		GFF1708	0.44	+1.7
1,733,312	+		GFF1708	0.44	+0.7
1,733,312	+		GFF1708	0.44	+0.8
1,733,317	+		GFF1708	0.45	-1.2
1,733,320	-		GFF1708	0.46	-0.8
1,733,320	-		GFF1708	0.46	+0.5
1,733,325	-		GFF1708	0.48	-1.1
1,733,330	-		GFF1708	0.49	-2.5
1,733,335	-		GFF1708	0.51	+0.8
1,733,345	-		GFF1708	0.54	-1.8
1,733,347	+		GFF1708	0.54	-2.1
1,733,350	-		GFF1708	0.55	-0.8
1,733,382	+		GFF1708	0.65	-1.1
1,733,390	-		GFF1708	0.67	-0.2
1,733,435	+		GFF1708	0.80	+0.7
1,733,443	-		GFF1708	0.83	-0.3
1,733,456	-		GFF1708	0.86	-0.5
1,733,485	+				+1.1
1,733,496	+				-0.4
1,733,498	-				+0.2
1,733,510	-				-1.2
1,733,511	+				+0.6
1,733,513	+				-0.9
1,733,513	+				+0.8
1,733,513	+				-0.1
1,733,513	+				+1.0
1,733,513	+				-0.5
1,733,519	-				-0.7
1,733,521	+				-1.6
1,733,521	-				-0.7
1,733,521	-				+1.4
1,733,531	+				-0.9
1,733,531	-				-0.6
1,733,541	+				-0.4
1,733,548	-				+0.9
1,733,548	-				-0.1
1,733,559	+				-0.7
1,733,559	+				+2.1
1,733,559	+				-2.2
1,733,591	-				+0.5
1,733,602	-		GFF1709	0.12	-0.6
1,733,604	+		GFF1709	0.12	-1.2
1,733,612	-		GFF1709	0.14	-0.3
1,733,617	+		GFF1709	0.15	-0.2
1,733,625	-		GFF1709	0.17	-0.3
1,733,625	-		GFF1709	0.17	-1.2
1,733,625	-		GFF1709	0.17	-0.9
1,733,630	-		GFF1709	0.19	-1.6
1,733,635	+		GFF1709	0.20	-0.2
1,733,635	+		GFF1709	0.20	+0.5
1,733,640	+		GFF1709	0.21	-0.4
1,733,640	+		GFF1709	0.21	-0.4
1,733,640	+		GFF1709	0.21	+0.7
1,733,640	+		GFF1709	0.21	-0.8
1,733,640	+		GFF1709	0.21	-0.2
1,733,640	+		GFF1709	0.21	-1.2
1,733,640	+		GFF1709	0.21	-0.1
1,733,640	+		GFF1709	0.21	+0.5
1,733,640	+		GFF1709	0.21	-1.1
1,733,640	+		GFF1709	0.21	+1.3
1,733,643	-		GFF1709	0.22	-0.4
1,733,645	+		GFF1709	0.22	-1.5
1,733,645	+		GFF1709	0.22	-1.2
1,733,645	+		GFF1709	0.22	-1.4
1,733,645	+		GFF1709	0.22	-0.6
1,733,645	+		GFF1709	0.22	+1.3
1,733,648	-		GFF1709	0.23	+1.0
1,733,648	-		GFF1709	0.23	-1.4
1,733,648	-		GFF1709	0.23	-2.1
1,733,648	-		GFF1709	0.23	+1.0
1,733,648	-		GFF1709	0.23	-1.1
1,733,648	-		GFF1709	0.23	-0.6
1,733,648	-		GFF1709	0.23	-0.1
1,733,648	-		GFF1709	0.23	-1.6
1,733,648	-		GFF1709	0.23	-1.1
1,733,648	-		GFF1709	0.23	+0.2
1,733,648	-		GFF1709	0.23	-0.4
1,733,651	+		GFF1709	0.24	+1.8
1,733,651	+		GFF1709	0.24	-0.3
1,733,653	-		GFF1709	0.24	+0.2
1,733,653	-		GFF1709	0.24	+0.2
1,733,655	-		GFF1709	0.25	-1.5
1,733,659	-		GFF1709	0.26	+0.3
1,733,664	-		GFF1709	0.27	-0.8
1,733,667	+		GFF1709	0.28	-0.7
1,733,669	-		GFF1709	0.28	-0.4
1,733,669	-		GFF1709	0.28	-1.4
1,733,675	-		GFF1709	0.30	+0.5
1,733,675	-		GFF1709	0.30	-0.7
1,733,675	-		GFF1709	0.30	-0.8
1,733,675	-		GFF1709	0.30	-1.9
1,733,677	-		GFF1709	0.30	-0.6
1,733,707	-		GFF1709	0.38	-0.6
1,733,736	-		GFF1709	0.45	-2.1
1,733,748	-		GFF1709	0.48	-0.8
1,733,754	+		GFF1709	0.50	-0.1
1,733,754	+		GFF1709	0.50	+0.1
1,733,754	+		GFF1709	0.50	-0.9
1,733,754	+		GFF1709	0.50	-1.6
1,733,762	-		GFF1709	0.52	-0.7
1,733,762	-		GFF1709	0.52	+1.1
1,733,762	-		GFF1709	0.52	-0.9
1,733,762	-		GFF1709	0.52	-0.0
1,733,762	-		GFF1709	0.52	-1.7
1,733,762	-		GFF1709	0.52	+0.1
1,733,792	+		GFF1709	0.59	-1.9
1,733,810	+		GFF1709	0.64	+0.6
1,733,847	+		GFF1709	0.73	-1.9
1,733,847	+		GFF1709	0.73	+0.5
1,733,855	-		GFF1709	0.75	-0.1
1,733,883	+		GFF1709	0.82	-0.2
1,733,886	-		GFF1709	0.83	+0.1
1,733,891	+		GFF1709	0.84	-1.1
1,733,891	-		GFF1709	0.84	+0.6
1,733,894	+		GFF1709	0.85	-0.4
1,733,924	-				+0.9
1,733,924	-				-2.0
1,733,949	+				-1.0
1,733,970	-				+0.3
1,734,003	+		GFF1710	0.13	-1.4
1,734,031	+		GFF1710	0.28	-1.4
1,734,031	+		GFF1710	0.28	-0.5
1,734,039	-		GFF1710	0.33	+1.9
1,734,039	-		GFF1710	0.33	-0.9
1,734,039	-		GFF1710	0.33	-0.5
1,734,039	-		GFF1710	0.33	-0.6
1,734,039	-		GFF1710	0.33	-1.8
1,734,039	-		GFF1710	0.33	-0.7
1,734,039	-		GFF1710	0.33	-0.4
1,734,046	+		GFF1710	0.37	-1.3
1,734,046	+		GFF1710	0.37	+1.1
1,734,057	+		GFF1710	0.43	+0.1
1,734,070	-		GFF1710	0.50	-1.2
1,734,074	-		GFF1710	0.52	-1.9
1,734,074	-		GFF1710	0.52	-0.3
1,734,089	-		GFF1710	0.60	-1.9
1,734,089	-		GFF1710	0.60	-0.1
1,734,094	+		GFF1710	0.63	-1.9
1,734,094	+		GFF1710	0.63	-0.6
1,734,100	-		GFF1710	0.66	+0.3
1,734,102	-		GFF1710	0.67	-1.5
1,734,102	-		GFF1710	0.67	+1.6
1,734,102	-		GFF1710	0.67	+0.4
1,734,102	-		GFF1710	0.67	-0.8
1,734,102	-		GFF1710	0.67	-0.3
1,734,106	+		GFF1710	0.69	-1.4
1,734,111	+		GFF1710	0.72	+0.8
1,734,119	-		GFF1710	0.77	-0.4
1,734,138	-		GFF1710	0.87	-0.5
1,734,216	-				+0.2
1,734,236	+				-1.0
1,734,244	-				-0.6
1,734,244	-				-0.5
1,734,253	+				-0.3
1,734,253	+				-1.4
1,734,253	+				+0.1
1,734,253	+				+0.1
1,734,261	-				-1.5
1,734,261	-				-0.8
1,734,261	-				+0.7
1,734,261	-				+1.0
1,734,261	-				-1.6
1,734,261	-				+0.1
1,734,266	+				-1.4
1,734,271	+				-0.8
1,734,274	-				+0.1
1,734,280	-				-0.9
1,734,280	-				-0.5
1,734,287	+				-0.3
1,734,325	-				-1.1
1,734,333	-				-2.1
1,734,333	-				+0.8
1,734,338	-				+0.6
1,734,338	-				-1.1
1,734,338	-				-0.5