Strain Fitness in Sphingobium sp. HT1-2 around GFF1046

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,050,656	+		GFF1045	0.25	-0.4
1,050,656	+		GFF1045	0.25	-1.4
1,050,656	+		GFF1045	0.25	-0.6
1,050,685	+		GFF1045	0.27	-0.0
1,050,686	+		GFF1045	0.27	+0.6
1,050,686	+		GFF1045	0.27	-1.0
1,050,708	+		GFF1045	0.29	+0.6
1,050,731	-		GFF1045	0.31	+0.4
1,050,737	+		GFF1045	0.31	-0.2
1,050,741	-		GFF1045	0.31	+1.3
1,050,757	+		GFF1045	0.33	-0.3
1,050,757	+		GFF1045	0.33	-0.4
1,050,765	-		GFF1045	0.33	-1.2
1,050,765	-		GFF1045	0.33	-1.2
1,050,769	+		GFF1045	0.34	+0.4
1,050,769	+		GFF1045	0.34	-1.1
1,050,774	+		GFF1045	0.34	-0.7
1,050,777	-		GFF1045	0.34	-1.6
1,050,787	-		GFF1045	0.35	-2.0
1,050,859	+		GFF1045	0.40	-0.3
1,050,859	+		GFF1045	0.40	-0.8
1,050,915	-		GFF1045	0.45	-2.1
1,050,915	-		GFF1045	0.45	+1.3
1,050,920	-		GFF1045	0.45	-0.7
1,050,978	-		GFF1045	0.50	+0.2
1,050,983	-		GFF1045	0.50	-0.9
1,051,005	+		GFF1045	0.52	-0.3
1,051,013	-		GFF1045	0.52	-0.6
1,051,013	-		GFF1045	0.52	+0.8
1,051,030	+		GFF1045	0.54	-0.7
1,051,045	-		GFF1045	0.55	-0.9
1,051,051	+		GFF1045	0.55	-0.1
1,051,065	+		GFF1045	0.56	-1.1
1,051,065	+		GFF1045	0.56	+2.1
1,051,070	+		GFF1045	0.57	-0.4
1,051,120	+		GFF1045	0.61	-0.9
1,051,125	+		GFF1045	0.61	+0.3
1,051,128	-		GFF1045	0.61	+0.9
1,051,128	-		GFF1045	0.61	-0.9
1,051,130	+		GFF1045	0.61	-0.2
1,051,133	-		GFF1045	0.62	+1.0
1,051,182	+		GFF1045	0.65	+0.7
1,051,184	+		GFF1045	0.66	+0.1
1,051,184	+		GFF1045	0.66	-1.4
1,051,184	+		GFF1045	0.66	+0.0
1,051,189	+		GFF1045	0.66	+0.8
1,051,189	+		GFF1045	0.66	-0.2
1,051,192	-		GFF1045	0.66	-1.8
1,051,202	-		GFF1045	0.67	-0.2
1,051,202	-		GFF1045	0.67	-0.2
1,051,202	-		GFF1045	0.67	-1.4
1,051,210	+		GFF1045	0.68	-0.9
1,051,217	+		GFF1045	0.68	+0.7
1,051,222	-		GFF1045	0.68	-0.7
1,051,231	+		GFF1045	0.69	-0.7
1,051,233	-		GFF1045	0.69	-0.7
1,051,247	+		GFF1045	0.70	-1.7
1,051,295	+		GFF1045	0.74	-0.1
1,051,295	+		GFF1045	0.74	-1.4
1,051,295	+		GFF1045	0.74	-0.5
1,051,303	-		GFF1045	0.75	-0.0
1,051,303	-		GFF1045	0.75	-1.4
1,051,303	-		GFF1045	0.75	+0.3
1,051,303	-		GFF1045	0.75	-1.8
1,051,305	+		GFF1045	0.75	-0.7
1,051,308	-		GFF1045	0.75	-0.8
1,051,310	-		GFF1045	0.75	+0.4
1,051,323	-		GFF1045	0.76	+0.2
1,051,323	-		GFF1045	0.76	-1.7
1,051,331	-		GFF1045	0.77	+0.6
1,051,341	-		GFF1045	0.78	+0.2
1,051,362	-		GFF1045	0.79	+0.1
1,051,374	+		GFF1045	0.80	-0.3
1,051,381	-		GFF1045	0.81	-0.3
1,051,410	+		GFF1045	0.83	-0.4
1,051,431	+		GFF1045	0.85	-1.0
1,051,431	-		GFF1045	0.85	+1.8
1,051,433	+		GFF1045	0.85	+0.6
1,051,433	+		GFF1045	0.85	+0.2
1,051,433	+		GFF1045	0.85	+0.7
1,051,433	+		GFF1045	0.85	-0.2
1,051,433	+		GFF1045	0.85	+0.0
1,051,433	+		GFF1045	0.85	+0.3
1,051,433	+		GFF1045	0.85	-1.3
1,051,433	+		GFF1045	0.85	+0.2
1,051,433	+		GFF1045	0.85	-0.6
1,051,433	+		GFF1045	0.85	+0.6
1,051,435	+		GFF1045	0.85	-0.4
1,051,437	-		GFF1045	0.85	-0.1
1,051,440	+		GFF1045	0.85	+0.3
1,051,440	+		GFF1045	0.85	+0.7
1,051,440	+		GFF1045	0.85	-1.4
1,051,440	+		GFF1045	0.85	+0.4
1,051,440	+		GFF1045	0.85	-1.4
1,051,441	-		GFF1045	0.85	-1.4
1,051,441	-		GFF1045	0.85	+0.1
1,051,441	-		GFF1045	0.85	-0.3
1,051,441	-		GFF1045	0.85	-0.4
1,051,442	+		GFF1045	0.85	-0.6
1,051,442	+		GFF1045	0.85	-0.4
1,051,448	-		GFF1045	0.86	+0.9
1,051,450	-		GFF1045	0.86	-0.4
1,051,508	+				-0.4
1,051,508	+				+0.3
1,051,513	+				-0.2
1,051,521	-				+0.9
1,051,605	+				-0.9
1,051,614	-				-0.9
1,051,626	+				+0.0
1,051,626	+				+0.4
1,051,634	+				-1.0
1,051,641	-				-1.1
1,051,722	-				+0.0
1,051,758	+		GFF1046	0.11	+0.1
1,051,766	-		GFF1046	0.12	-2.1
1,051,768	+		GFF1046	0.12	-0.8
1,051,768	+		GFF1046	0.12	-0.3
1,051,776	-		GFF1046	0.13	-0.0
1,051,776	-		GFF1046	0.13	-0.0
1,051,776	-		GFF1046	0.13	-0.8
1,051,776	-		GFF1046	0.13	+0.4
1,051,776	-		GFF1046	0.13	-1.0
1,051,776	-		GFF1046	0.13	+0.2
1,051,785	+		GFF1046	0.13	-1.2
1,051,798	-		GFF1046	0.15	-0.6
1,051,813	+		GFF1046	0.16	-0.3
1,051,827	+		GFF1046	0.18	-0.5
1,051,835	-		GFF1046	0.18	-0.8
1,051,839	+		GFF1046	0.19	+0.5
1,051,839	+		GFF1046	0.19	-1.3
1,051,839	+		GFF1046	0.19	-0.0
1,051,839	+		GFF1046	0.19	-0.9
1,051,847	-		GFF1046	0.20	-0.3
1,051,847	-		GFF1046	0.20	-1.4
1,051,901	+		GFF1046	0.25	-0.6
1,051,910	-		GFF1046	0.26	-0.4
1,051,910	-		GFF1046	0.26	-0.6
1,051,929	+		GFF1046	0.28	-0.9
1,051,929	+		GFF1046	0.28	+0.6
1,051,929	+		GFF1046	0.28	+0.3
1,051,930	-		GFF1046	0.28	-0.8
1,051,937	-		GFF1046	0.28	-1.0
1,051,937	-		GFF1046	0.28	-2.3
1,051,937	-		GFF1046	0.28	+0.1
1,051,946	-		GFF1046	0.29	-0.8
1,051,951	-		GFF1046	0.30	+1.1
1,051,951	-		GFF1046	0.30	+1.0
1,051,956	-		GFF1046	0.30	-0.8
1,051,956	-		GFF1046	0.30	-0.5
1,051,968	-		GFF1046	0.31	+0.3
1,051,973	-		GFF1046	0.32	-0.2
1,051,973	-		GFF1046	0.32	-1.0
1,051,973	-		GFF1046	0.32	+0.0
1,051,977	+		GFF1046	0.32	+0.3
1,052,006	+		GFF1046	0.35	-1.4
1,052,006	+		GFF1046	0.35	-1.1
1,052,006	+		GFF1046	0.35	+1.0
1,052,014	-		GFF1046	0.36	-0.3
1,052,014	-		GFF1046	0.36	-1.0
1,052,014	-		GFF1046	0.36	-0.8
1,052,014	-		GFF1046	0.36	-0.3
1,052,014	-		GFF1046	0.36	+0.6
1,052,014	-		GFF1046	0.36	-0.0
1,052,014	-		GFF1046	0.36	-1.4
1,052,014	-		GFF1046	0.36	-0.0
1,052,014	-		GFF1046	0.36	+0.2
1,052,018	+		GFF1046	0.36	+0.1
1,052,039	-		GFF1046	0.38	-0.3
1,052,040	-		GFF1046	0.39	-0.3
1,052,064	-		GFF1046	0.41	-0.7
1,052,082	-		GFF1046	0.43	+0.1
1,052,095	+		GFF1046	0.44	+0.0
1,052,114	-		GFF1046	0.46	-1.6
1,052,125	+		GFF1046	0.47	+0.4
1,052,133	-		GFF1046	0.48	+0.7
1,052,133	-		GFF1046	0.48	-2.1
1,052,133	-		GFF1046	0.48	+0.6
1,052,140	+		GFF1046	0.48	-0.1
1,052,143	-		GFF1046	0.49	-0.0
1,052,143	-		GFF1046	0.49	+0.1
1,052,146	-		GFF1046	0.49	-0.0
1,052,148	-		GFF1046	0.49	-0.7
1,052,153	+		GFF1046	0.50	-1.8
1,052,161	-		GFF1046	0.50	+0.3
1,052,161	-		GFF1046	0.50	+0.8
1,052,161	-		GFF1046	0.50	+1.1
1,052,163	+		GFF1046	0.51	-0.8
1,052,175	-		GFF1046	0.52	-0.3
1,052,185	+		GFF1046	0.53	+0.5
1,052,185	-		GFF1046	0.53	-0.0
1,052,193	-		GFF1046	0.54	-1.3
1,052,207	-		GFF1046	0.55	+1.3
1,052,207	-		GFF1046	0.55	-0.3
1,052,245	+		GFF1046	0.59	-0.3
1,052,245	+		GFF1046	0.59	-0.7
1,052,245	+		GFF1046	0.59	+0.3
1,052,254	+		GFF1046	0.60	-0.3
1,052,254	+		GFF1046	0.60	-1.0
1,052,254	+		GFF1046	0.60	-1.3
1,052,254	+		GFF1046	0.60	+0.3
1,052,256	+		GFF1046	0.60	-1.0
1,052,256	+		GFF1046	0.60	-0.2
1,052,258	-		GFF1046	0.60	+1.3
1,052,262	-		GFF1046	0.60	+2.7
1,052,262	-		GFF1046	0.60	+0.4
1,052,262	-		GFF1046	0.60	-0.3
1,052,262	-		GFF1046	0.60	+0.1
1,052,271	+		GFF1046	0.61	-0.4
1,052,279	-		GFF1046	0.62	+1.7
1,052,291	-		GFF1046	0.63	-1.3
1,052,350	+		GFF1046	0.69	-0.3
1,052,350	+		GFF1046	0.69	-1.0
1,052,355	+		GFF1046	0.70	-1.7
1,052,358	-		GFF1046	0.70	-0.4
1,052,360	+		GFF1046	0.70	-0.4
1,052,360	+		GFF1046	0.70	-0.5
1,052,365	+		GFF1046	0.71	-0.2
1,052,365	+		GFF1046	0.71	-1.0
1,052,368	-		GFF1046	0.71	-0.4
1,052,368	-		GFF1046	0.71	-0.4
1,052,373	-		GFF1046	0.71	-1.0
1,052,373	-		GFF1046	0.71	+0.7
1,052,382	+		GFF1046	0.72	-1.4
1,052,389	+		GFF1046	0.73	-0.9
1,052,392	-		GFF1046	0.73	-0.2
1,052,395	-		GFF1046	0.74	-0.2
1,052,397	-		GFF1046	0.74	-0.9
1,052,397	-		GFF1046	0.74	+0.1
1,052,412	+		GFF1046	0.75	-0.4
1,052,420	-		GFF1046	0.76	+0.4
1,052,425	-		GFF1046	0.77	-1.3
1,052,467	-		GFF1046	0.81	+0.7
1,052,468	-		GFF1046	0.81	-0.4
1,052,511	-		GFF1046	0.85	-1.8
1,052,515	+		GFF1046	0.85	+0.7
1,052,515	+		GFF1046	0.85	+1.9
1,052,515	+		GFF1046	0.85	+0.1
1,052,515	+		GFF1046	0.85	-0.2
1,052,520	+		GFF1046	0.86	+0.1
1,052,520	+		GFF1046	0.86	-0.9
1,052,523	-		GFF1046	0.86	-0.8
1,052,538	-		GFF1046	0.88	+0.8
1,052,603	-				-0.7
1,052,631	+				-1.0
1,052,633	-				-0.6
1,052,663	+				+0.6
1,052,760	+				-0.8
1,052,837	+				-0.4
1,053,045	-				-1.0
1,053,045	-				-0.8
1,053,045	-				+1.4
1,053,087	+		GFF1047	0.11	-0.0
1,053,095	-		GFF1047	0.11	-0.4
1,053,153	+		GFF1047	0.13	-0.6
1,053,153	+		GFF1047	0.13	-0.3
1,053,202	+		GFF1047	0.15	-0.4
1,053,210	-		GFF1047	0.15	-0.9
1,053,225	+		GFF1047	0.16	+0.7
1,053,233	-		GFF1047	0.16	+0.3
1,053,305	+		GFF1047	0.18	-1.2
1,053,318	-		GFF1047	0.19	+0.6
1,053,334	+		GFF1047	0.19	-1.0
1,053,358	-		GFF1047	0.20	+1.1
1,053,391	+		GFF1047	0.21	-1.6
1,053,454	+		GFF1047	0.23	-0.6
1,053,469	-		GFF1047	0.24	+0.8
1,053,491	-		GFF1047	0.25	+0.1
1,053,510	+		GFF1047	0.25	+0.7
1,053,550	+		GFF1047	0.27	+0.4
1,053,577	+		GFF1047	0.28	+0.2
1,053,624	-		GFF1047	0.29	-0.3
1,053,632	-		GFF1047	0.30	+0.0