Strain Fitness in Sphingobium sp. HT1-2 around GFF4645

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,644,075	+				+0.1
4,644,083	-				-1.8
4,644,083	-				+0.1
4,644,085	+				-1.1
4,644,085	+				-1.8
4,644,085	+				-0.2
4,644,085	+				-1.1
4,644,085	+				-0.7
4,644,093	-				+0.1
4,644,093	-				+0.2
4,644,093	-				+0.3
4,644,093	-				+0.1
4,644,093	-				-1.7
4,644,093	-				-1.1
4,644,093	-				-0.1
4,644,095	+				-1.1
4,644,100	+				-0.4
4,644,105	+				+0.0
4,644,105	+				+0.4
4,644,105	+				-0.7
4,644,113	-				+0.4
4,644,125	+				-1.6
4,644,125	+				-1.5
4,644,130	+				-0.9
4,644,130	+				-1.4
4,644,131	+				-0.8
4,644,138	-				-1.9
4,644,152	+				-0.6
4,644,158	+				-0.5
4,644,207	+				+0.3
4,644,207	+				-1.3
4,644,209	+				-0.1
4,644,215	+				-0.2
4,644,218	-				+0.1
4,644,220	+				-0.9
4,644,220	+				-0.6
4,644,220	+				-1.2
4,644,220	+				-0.0
4,644,220	+				-0.4
4,644,220	+				+0.4
4,644,220	+				-1.3
4,644,220	+				-1.1
4,644,220	+				+0.3
4,644,220	+				-0.1
4,644,220	+				-1.6
4,644,220	+				-1.3
4,644,220	+				-0.5
4,644,223	-				+1.5
4,644,225	+				-0.8
4,644,225	+				-1.0
4,644,225	+				-1.1
4,644,225	+				+0.4
4,644,225	+				-0.8
4,644,225	+				-0.1
4,644,228	-				+0.2
4,644,228	-				-0.8
4,644,228	-				-0.8
4,644,228	-				-0.8
4,644,228	-				-0.1
4,644,228	-				-0.6
4,644,228	-				-0.6
4,644,228	-				-1.6
4,644,228	-				-0.4
4,644,228	-				-0.6
4,644,228	-				+0.2
4,644,228	-				-0.3
4,644,228	-				-0.5
4,644,228	-				+0.2
4,644,228	-				+0.9
4,644,228	-				-0.5
4,644,228	-				-0.1
4,644,230	+				+0.1
4,644,230	+				+0.3
4,644,230	+				-0.9
4,644,230	+				-1.2
4,644,230	+				-0.9
4,644,230	+				+1.1
4,644,230	+				-1.0
4,644,230	+				-0.8
4,644,230	+				-1.1
4,644,230	+				-1.1
4,644,230	+				-1.4
4,644,230	+				+0.3
4,644,230	+				+0.4
4,644,232	+				-1.0
4,644,233	-				-0.6
4,644,233	-				-0.9
4,644,233	-				-0.6
4,644,233	-				-0.5
4,644,233	-				+1.0
4,644,233	-				-0.4
4,644,233	-				-1.1
4,644,233	-				-1.2
4,644,237	+				+0.4
4,644,238	-				-1.4
4,644,238	-				-1.0
4,644,238	-				+0.3
4,644,238	-				-0.6
4,644,238	-				+0.6
4,644,238	-				-0.5
4,644,238	-				+0.4
4,644,238	-				-0.8
4,644,238	-				-1.1
4,644,238	-				-0.4
4,644,238	-				+0.2
4,644,240	-				-0.5
4,644,240	-				-0.8
4,644,240	-				+1.1
4,644,240	-				-0.3
4,644,240	-				-1.1
4,644,240	-				+0.9
4,644,240	-				-0.5
4,644,240	-				+0.6
4,644,242	+				-0.5
4,644,242	+				+0.0
4,644,242	+				-1.4
4,644,242	+				-1.9
4,644,242	+				-1.3
4,644,242	+				-0.8
4,644,242	+				-0.5
4,644,242	+				-1.1
4,644,242	+				-0.5
4,644,247	+				+1.4
4,644,250	-				-1.5
4,644,250	-				-0.6
4,644,250	-				+0.2
4,644,250	-				+0.3
4,644,250	-				-0.6
4,644,264	+				-1.5
4,644,267	-				-0.6
4,644,282	+				-0.2
4,644,282	+				-0.2
4,644,300	-				-1.7
4,644,355	-		GFF4644	0.14	-0.5
4,644,365	+		GFF4644	0.15	-1.3
4,644,365	-		GFF4644	0.15	-0.4
4,644,373	-		GFF4644	0.16	-0.4
4,644,373	-		GFF4644	0.16	-0.3
4,644,399	+		GFF4644	0.19	+0.4
4,644,399	+		GFF4644	0.19	+0.4
4,644,404	+		GFF4644	0.20	-0.2
4,644,405	-		GFF4644	0.20	+0.1
4,644,407	-		GFF4644	0.20	-1.2
4,644,407	-		GFF4644	0.20	+0.3
4,644,409	+		GFF4644	0.21	-1.1
4,644,422	+		GFF4644	0.22	-1.0
4,644,454	+		GFF4644	0.27	-1.6
4,644,459	+		GFF4644	0.27	+0.5
4,644,468	+		GFF4644	0.28	-1.1
4,644,501	-		GFF4644	0.33	+0.3
4,644,511	-		GFF4644	0.34	-0.3
4,644,513	+		GFF4644	0.34	-1.4
4,644,513	+		GFF4644	0.34	-1.2
4,644,513	+		GFF4644	0.34	-1.7
4,644,514	+		GFF4644	0.34	-0.1
4,644,521	-		GFF4644	0.35	+1.6
4,644,521	-		GFF4644	0.35	+0.4
4,644,521	-		GFF4644	0.35	-1.5
4,644,521	-		GFF4644	0.35	-0.9
4,644,521	-		GFF4644	0.35	-1.6
4,644,526	+		GFF4644	0.36	-1.7
4,644,534	-		GFF4644	0.37	-0.3
4,644,534	-		GFF4644	0.37	-1.1
4,644,540	+		GFF4644	0.38	-0.6
4,644,564	+		GFF4644	0.41	+0.6
4,644,583	+		GFF4644	0.43	+1.2
4,644,625	-		GFF4644	0.49	-0.2
4,644,625	-		GFF4644	0.49	-1.6
4,644,625	-		GFF4644	0.49	+1.2
4,644,625	-		GFF4644	0.49	-2.7
4,644,644	+		GFF4644	0.51	-0.9
4,644,648	-		GFF4644	0.51	-1.9
4,644,651	+		GFF4644	0.52	-0.2
4,644,652	-		GFF4644	0.52	-1.0
4,644,652	-		GFF4644	0.52	-1.1
4,644,652	-		GFF4644	0.52	-1.9
4,644,659	-		GFF4644	0.53	-1.1
4,644,659	-		GFF4644	0.53	-1.5
4,644,705	+		GFF4644	0.59	-0.5
4,644,705	+		GFF4644	0.59	-2.0
4,644,708	+		GFF4644	0.59	+0.2
4,644,726	-		GFF4644	0.62	+0.5
4,644,732	-		GFF4644	0.62	-2.3
4,644,738	+		GFF4644	0.63	+0.1
4,644,780	+		GFF4644	0.68	-1.7
4,644,788	-		GFF4644	0.69	+0.5
4,644,798	-		GFF4644	0.71	-1.4
4,644,826	+		GFF4644	0.74	-0.1
4,644,843	-		GFF4644	0.77	-0.1
4,644,846	+		GFF4644	0.77	-0.2
4,644,847	+		GFF4644	0.77	-0.5
4,644,847	+		GFF4644	0.77	-0.4
4,644,847	+		GFF4644	0.77	-1.9
4,644,850	-		GFF4644	0.77	-0.7
4,644,855	-		GFF4644	0.78	-0.1
4,644,863	+		GFF4644	0.79	-1.5
4,644,874	+		GFF4644	0.81	-1.2
4,644,875	+		GFF4644	0.81	+1.4
4,644,876	-		GFF4644	0.81	+0.2
4,644,881	+		GFF4644	0.81	-0.9
4,644,881	+		GFF4644	0.81	-1.0
4,644,886	+		GFF4644	0.82	-1.8
4,644,886	+		GFF4644	0.82	-0.8
4,644,893	+		GFF4644	0.83	-0.8
4,644,894	-		GFF4644	0.83	-0.6
4,644,894	-		GFF4644	0.83	+0.0
4,644,899	+		GFF4644	0.84	+0.1
4,644,915	-		GFF4644	0.86	-0.5
4,644,958	+				-0.4
4,644,980	+				-1.5
4,644,997	+				-2.3
4,645,017	-				+0.9
4,645,019	+				-1.5
4,645,019	+				+0.4
4,645,019	+				+0.4
4,645,019	+				-0.8
4,645,024	+				-0.5
4,645,027	-				-0.8
4,645,027	-				-1.7
4,645,027	-				-0.7
4,645,027	-				-1.1
4,645,027	-				-1.1
4,645,027	-				-1.6
4,645,027	-				+1.6
4,645,027	-				-1.3
4,645,032	-				+1.1
4,645,033	-				-0.8
4,645,033	-				-1.1
4,645,047	+				+0.5
4,645,053	+				-1.6
4,645,055	-				+0.2
4,645,058	+				-0.5
4,645,058	+				-0.8
4,645,061	-				-1.9
4,645,061	-				-1.4
4,645,066	-				+0.4
4,645,079	+				-0.9
4,645,079	+				-0.8
4,645,079	+				-0.4
4,645,087	-				+0.0
4,645,099	+				+0.3
4,645,099	+				-0.3
4,645,099	+				+0.6
4,645,099	+				-1.9
4,645,141	-		GFF4645	0.13	+0.4
4,645,147	+		GFF4645	0.14	-1.2
4,645,149	+		GFF4645	0.14	-0.7
4,645,153	-		GFF4645	0.15	+0.3
4,645,153	-		GFF4645	0.15	-1.0
4,645,153	-		GFF4645	0.15	-2.1
4,645,164	+		GFF4645	0.17	+0.0
4,645,172	-		GFF4645	0.18	-0.9
4,645,204	+		GFF4645	0.23	-0.8
4,645,212	-		GFF4645	0.24	-0.5
4,645,233	-		GFF4645	0.28	+0.4
4,645,235	+		GFF4645	0.28	-0.4
4,645,248	-		GFF4645	0.30	-1.3
4,645,268	-		GFF4645	0.33	-0.5
4,645,269	-		GFF4645	0.34	-1.3
4,645,287	+		GFF4645	0.37	+0.2
4,645,296	+		GFF4645	0.38	-0.6
4,645,297	+		GFF4645	0.38	-1.1
4,645,297	+		GFF4645	0.38	-0.2
4,645,297	+		GFF4645	0.38	-1.4
4,645,297	+		GFF4645	0.38	-0.1
4,645,297	+		GFF4645	0.38	+0.0
4,645,297	+		GFF4645	0.38	-0.1
4,645,297	+		GFF4645	0.38	-1.1
4,645,300	-		GFF4645	0.39	+0.5
4,645,300	-		GFF4645	0.39	-0.8
4,645,304	+		GFF4645	0.39	+0.4
4,645,304	-		GFF4645	0.39	-0.6
4,645,305	-		GFF4645	0.40	-1.1
4,645,305	-		GFF4645	0.40	-0.3
4,645,312	-		GFF4645	0.41	+0.3
4,645,329	+		GFF4645	0.43	-1.3
4,645,345	+		GFF4645	0.46	+1.4
4,645,345	+		GFF4645	0.46	+0.2
4,645,363	-		GFF4645	0.49	-0.1
4,645,394	+		GFF4645	0.54	-0.6
4,645,471	+		GFF4645	0.67	-1.0
4,645,478	+		GFF4645	0.68	-1.5
4,645,478	+		GFF4645	0.68	+0.0
4,645,478	+		GFF4645	0.68	-1.0
4,645,478	+		GFF4645	0.68	+0.1
4,645,479	-		GFF4645	0.68	-0.6
4,645,486	-		GFF4645	0.69	-0.5
4,645,486	-		GFF4645	0.69	-0.1
4,645,486	-		GFF4645	0.69	-1.0
4,645,486	-		GFF4645	0.69	+0.1
4,645,523	-		GFF4645	0.75	-1.4
4,645,552	-		GFF4645	0.80	-2.2
4,645,558	+		GFF4645	0.81	-1.3
4,645,566	-		GFF4645	0.82	-0.1
4,645,566	-		GFF4645	0.82	-1.7
4,645,566	-		GFF4645	0.82	+0.2
4,645,571	+		GFF4645	0.83	-1.1
4,645,571	+		GFF4645	0.83	+0.4
4,645,574	-		GFF4645	0.83	-0.5
4,645,579	-		GFF4645	0.84	-1.9
4,645,579	-		GFF4645	0.84	-0.1
4,645,579	-		GFF4645	0.84	+0.8
4,645,598	+		GFF4645	0.87	-0.5
4,645,603	+		GFF4645	0.88	+0.0
4,645,605	+		GFF4645	0.88	+0.5
4,645,612	+		GFF4645	0.89	-0.8
4,645,613	-		GFF4645	0.90	-1.1
4,645,620	-				-0.8
4,645,637	+				-1.1
4,645,648	+				-0.1
4,645,663	-				-0.2
4,645,679	-				+0.4
4,645,679	-				+0.4
4,645,679	-				+0.1
4,645,689	-				-1.1
4,645,689	-				-0.8
4,645,711	-				-0.5
4,645,711	-				-0.9
4,645,711	-				+0.4
4,645,718	+				+0.2
4,645,722	-		GFF4646	0.11	-0.2
4,645,761	+		GFF4646	0.19	+0.1
4,645,783	+		GFF4646	0.24	-1.9
4,645,788	+		GFF4646	0.25	-0.8
4,645,788	+		GFF4646	0.25	+1.0
4,645,788	+		GFF4646	0.25	-1.3
4,645,788	+		GFF4646	0.25	-0.6
4,645,788	+		GFF4646	0.25	+0.1
4,645,788	+		GFF4646	0.25	-0.5
4,645,791	-		GFF4646	0.26	+0.8
4,645,793	+		GFF4646	0.26	-0.9
4,645,795	+		GFF4646	0.27	+1.3
4,645,796	-		GFF4646	0.27	+0.4
4,645,796	-		GFF4646	0.27	-1.1
4,645,796	-		GFF4646	0.27	+0.6
4,645,796	-		GFF4646	0.27	-0.5
4,645,801	-		GFF4646	0.28	-0.1
4,645,801	-		GFF4646	0.28	+0.9
4,645,807	+		GFF4646	0.29	+0.1
4,645,807	+		GFF4646	0.29	+1.0
4,645,807	+		GFF4646	0.29	-0.5
4,645,810	-		GFF4646	0.30	-1.2
4,645,810	-		GFF4646	0.30	-1.9
4,645,815	-		GFF4646	0.31	-0.5
4,645,815	-		GFF4646	0.31	-0.9
4,645,815	-		GFF4646	0.31	-0.8
4,645,815	-		GFF4646	0.31	-0.6
4,645,815	-		GFF4646	0.31	-0.1
4,645,837	+		GFF4646	0.36	-1.1
4,645,847	+		GFF4646	0.38	-0.9
4,645,847	+		GFF4646	0.38	-1.3
4,645,847	+		GFF4646	0.38	-0.4
4,645,847	+		GFF4646	0.38	+0.1
4,645,847	+		GFF4646	0.38	-2.1
4,645,847	+		GFF4646	0.38	-1.1
4,645,847	+		GFF4646	0.38	-1.1
4,645,847	+		GFF4646	0.38	-0.3
4,645,847	+		GFF4646	0.38	-2.6
4,645,855	-		GFF4646	0.40	-0.6
4,645,855	-		GFF4646	0.40	-0.3
4,645,855	-		GFF4646	0.40	-0.6
4,645,855	-		GFF4646	0.40	-0.6
4,645,855	-		GFF4646	0.40	+0.2
4,645,855	-		GFF4646	0.40	-1.7
4,645,855	-		GFF4646	0.40	-0.4
4,645,855	-		GFF4646	0.40	-0.6
4,645,855	-		GFF4646	0.40	+1.5
4,645,855	-		GFF4646	0.40	-0.6
4,645,855	-		GFF4646	0.40	-2.6
4,645,855	-		GFF4646	0.40	-0.5
4,645,855	-		GFF4646	0.40	-0.7
4,645,855	-		GFF4646	0.40	-0.9
4,645,855	-		GFF4646	0.40	-1.6
4,645,868	-		GFF4646	0.43	+0.0
4,645,870	-		GFF4646	0.43	+0.7
4,645,872	+		GFF4646	0.44	-0.1
4,645,873	+		GFF4646	0.44	-0.6
4,645,873	+		GFF4646	0.44	-0.4
4,645,882	+		GFF4646	0.46	-1.0
4,645,882	+		GFF4646	0.46	-1.9
4,645,890	-		GFF4646	0.48	-0.3
4,645,890	-		GFF4646	0.48	-1.1
4,645,890	-		GFF4646	0.48	-0.3
4,645,938	-		GFF4646	0.58	+0.4
4,645,938	-		GFF4646	0.58	+0.6
4,645,949	-		GFF4646	0.61	-1.0
4,645,949	-		GFF4646	0.61	+1.9
4,645,971	-		GFF4646	0.65	-2.7
4,645,982	+		GFF4646	0.68	-0.1
4,645,990	-		GFF4646	0.70	+0.8
4,646,002	+		GFF4646	0.72	-1.5
4,646,010	-		GFF4646	0.74	-0.4
4,646,015	-		GFF4646	0.75	+0.1
4,646,033	-		GFF4646	0.79	-0.6
4,646,033	-		GFF4646	0.79	+0.9
4,646,050	+		GFF4646	0.83	+0.4
4,646,050	-		GFF4646	0.83	+0.5
4,646,055	-		GFF4646	0.84	-1.1
4,646,075	+		GFF4646	0.88	+0.4
4,646,075	+		GFF4646	0.88	-0.8
4,646,076	-		GFF4646	0.88	-0.5
4,646,076	-		GFF4646	0.88	-1.1
4,646,083	-				-2.2
4,646,095	+				+0.8
4,646,095	+				-1.0
4,646,106	+				-1.1
4,646,135	+				-1.2
4,646,135	+				+0.1
4,646,135	+				+0.2
4,646,135	+				+0.6
4,646,135	+				+0.2
4,646,135	+				-0.6
4,646,135	+				-0.2
4,646,143	-				-3.2
4,646,143	-				-0.9
4,646,143	-				-0.4
4,646,143	-				-1.4
4,646,143	-				-2.1
4,646,143	-				-0.9
4,646,143	-				-0.9
4,646,143	-				+0.1
4,646,144	+				-1.1
4,646,178	-				+0.7
4,646,192	+				+0.5
4,646,207	+				-0.5
4,646,215	-				+0.2
4,646,234	-				-0.9
4,646,246	-				+0.1
4,646,249	-				-0.6
4,646,252	+				+0.9
4,646,252	+				-1.7
4,646,255	-				-1.1
4,646,256	-				-0.5
4,646,257	+				-0.5
4,646,260	-				+0.4
4,646,260	-				-0.3
4,646,265	-				-1.0
4,646,265	-				-0.6
4,646,265	-				-0.5
4,646,282	+				-1.2
4,646,290	-				+0.0
4,646,290	-				+0.4
4,646,290	-				-1.0
4,646,298	-				-2.6
4,646,318	+				-0.7
4,646,318	+				-1.4
4,646,326	-		GFF4647	0.11	-0.9
4,646,342	-		GFF4647	0.12	-0.4
4,646,359	+		GFF4647	0.14	-0.6
4,646,359	+		GFF4647	0.14	-0.6
4,646,359	+		GFF4647	0.14	-1.2
4,646,359	+		GFF4647	0.14	-0.9
4,646,359	+		GFF4647	0.14	+0.0
4,646,359	+		GFF4647	0.14	-1.8
4,646,365	+		GFF4647	0.14	+1.0
4,646,365	+		GFF4647	0.14	-0.8
4,646,367	-		GFF4647	0.14	-0.5
4,646,367	-		GFF4647	0.14	-1.1
4,646,373	-		GFF4647	0.15	-1.4
4,646,405	+		GFF4647	0.18	-0.3
4,646,410	+		GFF4647	0.18	-1.5
4,646,410	+		GFF4647	0.18	-2.3
4,646,440	+		GFF4647	0.21	-0.5
4,646,448	-		GFF4647	0.22	-0.8
4,646,450	+		GFF4647	0.22	-1.0
4,646,453	-		GFF4647	0.22	-0.2
4,646,458	-		GFF4647	0.23	+0.0
4,646,458	-		GFF4647	0.23	-1.6
4,646,481	-		GFF4647	0.25	-0.9
4,646,490	+		GFF4647	0.26	-0.5
4,646,492	+		GFF4647	0.26	+0.2
4,646,496	-		GFF4647	0.26	-0.1
4,646,504	+		GFF4647	0.27	-0.7
4,646,504	+		GFF4647	0.27	+0.1
4,646,504	+		GFF4647	0.27	-1.0
4,646,505	-		GFF4647	0.27	-1.4
4,646,509	+		GFF4647	0.27	+1.1
4,646,512	-		GFF4647	0.28	-0.5
4,646,512	-		GFF4647	0.28	+0.4
4,646,512	-		GFF4647	0.28	-2.5
4,646,512	-		GFF4647	0.28	+0.2
4,646,512	-		GFF4647	0.28	+1.4
4,646,516	+		GFF4647	0.28	-0.6
4,646,523	+		GFF4647	0.29	-1.6
4,646,529	-		GFF4647	0.29	+0.1
4,646,579	-		GFF4647	0.34	-2.4
4,646,584	+		GFF4647	0.34	-0.6
4,646,584	+		GFF4647	0.34	+0.7
4,646,592	-		GFF4647	0.35	-1.4
4,646,592	-		GFF4647	0.35	+0.5
4,646,597	-		GFF4647	0.36	+0.7
4,646,610	+		GFF4647	0.37	+0.0
4,646,659	-		GFF4647	0.41	+1.2