Strain Fitness in Sphingobium sp. HT1-2 around GFF4626

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,622,079	+		GFF4625	0.69	-0.8
4,622,082	-		GFF4625	0.69	+0.3
4,622,128	+		GFF4625	0.70	-1.8
4,622,128	+		GFF4625	0.70	+1.1
4,622,136	-		GFF4625	0.71	-0.3
4,622,136	-		GFF4625	0.71	+0.2
4,622,136	-		GFF4625	0.71	-2.7
4,622,150	-		GFF4625	0.71	+0.1
4,622,160	+		GFF4625	0.71	-0.1
4,622,160	+		GFF4625	0.71	-0.3
4,622,161	+		GFF4625	0.71	-1.0
4,622,168	-		GFF4625	0.72	-1.8
4,622,168	-		GFF4625	0.72	-1.7
4,622,170	+		GFF4625	0.72	-0.9
4,622,178	-		GFF4625	0.72	+0.3
4,622,217	+		GFF4625	0.73	-1.4
4,622,225	-		GFF4625	0.73	-1.9
4,622,235	+		GFF4625	0.74	-1.5
4,622,236	+		GFF4625	0.74	-1.9
4,622,237	+		GFF4625	0.74	-2.1
4,622,238	+		GFF4625	0.74	-0.1
4,622,244	-		GFF4625	0.74	-1.3
4,622,252	+		GFF4625	0.74	-1.4
4,622,257	+		GFF4625	0.74	+0.7
4,622,257	+		GFF4625	0.74	-0.1
4,622,257	+		GFF4625	0.74	+1.2
4,622,260	-		GFF4625	0.74	-1.6
4,622,260	-		GFF4625	0.74	-1.2
4,622,260	-		GFF4625	0.74	+0.9
4,622,262	+		GFF4625	0.75	-0.7
4,622,275	-		GFF4625	0.75	-0.9
4,622,279	-		GFF4625	0.75	-0.6
4,622,282	+		GFF4625	0.75	-0.7
4,622,290	-		GFF4625	0.75	-0.3
4,622,290	-		GFF4625	0.75	-1.3
4,622,295	+		GFF4625	0.76	+0.6
4,622,295	-		GFF4625	0.76	-0.3
4,622,312	+		GFF4625	0.76	-2.3
4,622,314	+		GFF4625	0.76	+0.5
4,622,314	+		GFF4625	0.76	-1.2
4,622,314	-		GFF4625	0.76	-0.7
4,622,332	+		GFF4625	0.77	+0.4
4,622,332	+		GFF4625	0.77	-1.0
4,622,342	+		GFF4625	0.77	-0.4
4,622,367	+		GFF4625	0.78	-1.3
4,622,370	+		GFF4625	0.78	-1.7
4,622,391	-		GFF4625	0.79	-1.4
4,622,392	+		GFF4625	0.79	-1.2
4,622,398	+		GFF4625	0.79	-1.7
4,622,400	-		GFF4625	0.79	-0.3
4,622,403	+		GFF4625	0.79	-0.7
4,622,408	+		GFF4625	0.79	-0.7
4,622,416	-		GFF4625	0.79	-0.2
4,622,425	-		GFF4625	0.80	-0.8
4,622,432	+		GFF4625	0.80	-1.4
4,622,447	-		GFF4625	0.80	-2.5
4,622,473	+		GFF4625	0.81	+0.2
4,622,488	+		GFF4625	0.82	-1.7
4,622,488	+		GFF4625	0.82	-0.7
4,622,488	+		GFF4625	0.82	-0.6
4,622,488	+		GFF4625	0.82	-1.6
4,622,488	+		GFF4625	0.82	-1.7
4,622,488	+		GFF4625	0.82	-0.2
4,622,488	+		GFF4625	0.82	-1.3
4,622,488	+		GFF4625	0.82	-0.7
4,622,488	+		GFF4625	0.82	-2.6
4,622,488	+		GFF4625	0.82	-2.2
4,622,488	+		GFF4625	0.82	-0.3
4,622,488	+		GFF4625	0.82	-0.6
4,622,488	+		GFF4625	0.82	-1.0
4,622,488	+		GFF4625	0.82	-1.9
4,622,488	+		GFF4625	0.82	-1.2
4,622,488	+		GFF4625	0.82	-1.3
4,622,488	+		GFF4625	0.82	-1.0
4,622,488	+		GFF4625	0.82	-1.8
4,622,488	+		GFF4625	0.82	-1.0
4,622,488	+		GFF4625	0.82	-0.3
4,622,496	-		GFF4625	0.82	-2.0
4,622,496	-		GFF4625	0.82	-3.1
4,622,496	-		GFF4625	0.82	-0.7
4,622,496	-		GFF4625	0.82	+0.3
4,622,496	-		GFF4625	0.82	-0.8
4,622,496	-		GFF4625	0.82	-1.6
4,622,496	-		GFF4625	0.82	-1.4
4,622,496	-		GFF4625	0.82	-1.0
4,622,496	-		GFF4625	0.82	+0.5
4,622,496	-		GFF4625	0.82	-2.3
4,622,496	-		GFF4625	0.82	+0.5
4,622,496	-		GFF4625	0.82	+0.5
4,622,496	-		GFF4625	0.82	-1.9
4,622,496	-		GFF4625	0.82	-1.0
4,622,496	-		GFF4625	0.82	-0.5
4,622,496	-		GFF4625	0.82	+0.5
4,622,496	-		GFF4625	0.82	-0.9
4,622,496	-		GFF4625	0.82	-0.5
4,622,497	+		GFF4625	0.82	-0.5
4,622,497	+		GFF4625	0.82	-1.5
4,622,505	-		GFF4625	0.82	-0.2
4,622,505	-		GFF4625	0.82	-0.5
4,622,505	-		GFF4625	0.82	-1.4
4,622,510	-		GFF4625	0.82	-1.9
4,622,534	+		GFF4625	0.83	-0.5
4,622,534	+		GFF4625	0.83	-0.1
4,622,534	+		GFF4625	0.83	-1.6
4,622,534	+		GFF4625	0.83	-0.9
4,622,534	+		GFF4625	0.83	-0.3
4,622,534	+		GFF4625	0.83	-0.5
4,622,534	+		GFF4625	0.83	-1.1
4,622,534	+		GFF4625	0.83	-0.6
4,622,539	+		GFF4625	0.83	-0.8
4,622,542	-		GFF4625	0.83	-0.8
4,622,542	-		GFF4625	0.83	-0.7
4,622,542	-		GFF4625	0.83	-0.9
4,622,542	-		GFF4625	0.83	-0.3
4,622,542	-		GFF4625	0.83	-1.6
4,622,542	-		GFF4625	0.83	-0.8
4,622,542	-		GFF4625	0.83	-0.9
4,622,542	-		GFF4625	0.83	-0.0
4,622,583	+		GFF4625	0.85	-1.7
4,622,633	+		GFF4625	0.86	-1.4
4,622,668	+		GFF4625	0.87	+0.9
4,622,674	-		GFF4625	0.88	-1.2
4,622,693	+		GFF4625	0.88	-0.4
4,622,694	-		GFF4625	0.88	-0.5
4,622,703	+		GFF4625	0.88	-2.1
4,622,703	+		GFF4625	0.88	+1.0
4,622,703	+		GFF4625	0.88	-0.7
4,622,703	+		GFF4625	0.88	+0.8
4,622,703	+		GFF4625	0.88	-1.4
4,622,703	+		GFF4625	0.88	-0.9
4,622,703	+		GFF4625	0.88	-2.2
4,622,703	+		GFF4625	0.88	-0.5
4,622,703	+		GFF4625	0.88	-1.3
4,622,711	-		GFF4625	0.89	+0.2
4,622,711	-		GFF4625	0.89	-0.7
4,622,711	-		GFF4625	0.89	-1.3
4,622,711	-		GFF4625	0.89	-0.8
4,622,711	-		GFF4625	0.89	-0.3
4,622,711	-		GFF4625	0.89	-0.2
4,622,711	-		GFF4625	0.89	-0.8
4,622,711	-		GFF4625	0.89	-0.6
4,622,711	-		GFF4625	0.89	-0.3
4,622,711	-		GFF4625	0.89	+0.2
4,622,711	-		GFF4625	0.89	-0.5
4,622,711	-		GFF4625	0.89	-0.7
4,622,711	-		GFF4625	0.89	-0.3
4,622,711	-		GFF4625	0.89	+0.7
4,622,711	-		GFF4625	0.89	-0.0
4,622,711	-		GFF4625	0.89	+0.4
4,622,711	-		GFF4625	0.89	-1.9
4,622,711	-		GFF4625	0.89	-0.7
4,622,711	-		GFF4625	0.89	-1.0
4,622,717	+		GFF4625	0.89	+0.1
4,622,717	+		GFF4625	0.89	-0.7
4,622,725	-		GFF4625	0.89	-0.9
4,622,738	+		GFF4625	0.90	+0.5
4,622,738	+		GFF4625	0.90	-2.7
4,622,738	+		GFF4625	0.90	-1.3
4,622,738	+		GFF4625	0.90	-1.0
4,622,745	+		GFF4625	0.90	+0.9
4,622,746	-		GFF4625	0.90	-0.2
4,622,746	-		GFF4625	0.90	-0.7
4,622,746	-		GFF4625	0.90	-1.1
4,622,746	-		GFF4625	0.90	+0.6
4,622,760	+				+0.5
4,622,760	+				-2.1
4,622,760	+				-1.1
4,622,767	+				+0.5
4,622,768	+				+0.8
4,622,768	-				-1.9
4,622,768	-				-1.1
4,622,772	+				+0.2
4,622,775	-				-0.8
4,622,780	-				+0.1
4,622,786	+				+0.5
4,622,787	-				-1.4
4,622,787	-				+0.3
4,622,794	-				-1.6
4,622,804	-				+0.2
4,622,871	-				-0.2
4,622,873	+				+2.0
4,622,878	+				-0.3
4,622,878	+				-0.7
4,622,878	+				-1.0
4,622,878	+				-0.3
4,622,886	-				-2.4
4,622,886	-				-1.0
4,622,886	-				+0.0
4,622,888	+				-0.9
4,622,896	-				+0.5
4,622,896	-				-0.2
4,622,896	-				-1.9
4,622,896	-				+0.0
4,622,896	-				-0.9
4,622,896	-				-0.1
4,622,906	-				-2.1
4,622,906	-				+0.7
4,622,928	-				-0.9
4,622,954	+				-1.8
4,622,962	-				-2.5
4,622,981	-				+0.5
4,622,981	-				-1.6
4,622,981	-				+0.1
4,622,983	+				-1.2
4,622,985	+				+0.1
4,622,985	+				-1.1
4,622,990	+				-2.6
4,622,990	+				+0.2
4,622,990	+				+0.3
4,622,990	+				-0.1
4,622,998	-				-1.9
4,623,004	+				+0.1
4,623,013	-				+0.2
4,623,017	+				+0.2
4,623,037	-				+0.5
4,623,062	+				-2.3
4,623,065	+				-0.1
4,623,067	-				-1.1
4,623,072	-				-1.2
4,623,073	-				-1.1
4,623,103	+				-2.1
4,623,111	-				-0.4
4,623,111	-				-1.7
4,623,128	-				-0.6
4,623,128	-				-2.2
4,623,129	-				+0.0
4,623,146	-				-0.5
4,623,152	+				-2.4
4,623,163	+				-0.9
4,623,163	+				-0.7
4,623,165	+				-1.7
4,623,165	+				-1.0
4,623,165	+				+0.5
4,623,165	+				-2.3
4,623,171	-				-0.4
4,623,173	-				-1.0
4,623,173	-				+0.1
4,623,175	+				-0.7
4,623,185	+				-1.8
4,623,188	-				-0.7
4,623,188	-				-1.9
4,623,225	+		GFF4626	0.13	-0.8
4,623,232	+		GFF4626	0.14	-0.3
4,623,232	+		GFF4626	0.14	-0.3
4,623,232	+		GFF4626	0.14	-1.9
4,623,233	-		GFF4626	0.14	-1.4
4,623,238	-		GFF4626	0.14	-1.3
4,623,239	+		GFF4626	0.14	-1.8
4,623,240	-		GFF4626	0.14	-0.2
4,623,240	-		GFF4626	0.14	-1.2
4,623,240	-		GFF4626	0.14	-1.0
4,623,247	+		GFF4626	0.15	-1.8
4,623,255	-		GFF4626	0.16	-1.8
4,623,270	+		GFF4626	0.17	-0.5
4,623,270	+		GFF4626	0.17	+0.1
4,623,273	-		GFF4626	0.17	-1.3
4,623,278	-		GFF4626	0.18	+0.0
4,623,297	-		GFF4626	0.19	-1.6
4,623,318	+		GFF4626	0.21	-0.9
4,623,326	-		GFF4626	0.22	-0.8
4,623,326	-		GFF4626	0.22	+0.7
4,623,326	-		GFF4626	0.22	-0.9
4,623,379	+		GFF4626	0.27	-2.0
4,623,380	+		GFF4626	0.27	-1.5
4,623,384	+		GFF4626	0.27	+0.6
4,623,388	-		GFF4626	0.27	-0.6
4,623,392	-		GFF4626	0.28	+0.5
4,623,401	+		GFF4626	0.28	-0.9
4,623,401	+		GFF4626	0.28	+0.8
4,623,401	+		GFF4626	0.28	-1.3
4,623,409	-		GFF4626	0.29	-0.7
4,623,409	-		GFF4626	0.29	-1.1
4,623,409	-		GFF4626	0.29	-1.2
4,623,409	-		GFF4626	0.29	-0.2
4,623,409	-		GFF4626	0.29	-1.0
4,623,507	+		GFF4626	0.38	+1.6
4,623,507	+		GFF4626	0.38	-1.4
4,623,507	+		GFF4626	0.38	+0.3
4,623,515	-		GFF4626	0.39	-1.0
4,623,515	-		GFF4626	0.39	+0.7
4,623,516	+		GFF4626	0.39	+0.1
4,623,516	+		GFF4626	0.39	-0.3
4,623,567	-		GFF4626	0.43	-0.9
4,623,577	-		GFF4626	0.44	+1.0
4,623,583	-		GFF4626	0.45	-0.8
4,623,589	+		GFF4626	0.45	+0.2
4,623,589	+		GFF4626	0.45	-0.1
4,623,597	-		GFF4626	0.46	-1.3
4,623,629	-		GFF4626	0.49	-1.7
4,623,631	+		GFF4626	0.49	-0.4
4,623,631	+		GFF4626	0.49	-0.3
4,623,634	-		GFF4626	0.49	-1.0
4,623,646	-		GFF4626	0.50	-1.7
4,623,651	+		GFF4626	0.51	+0.2
4,623,659	+		GFF4626	0.51	-0.5
4,623,659	-		GFF4626	0.51	+0.5
4,623,659	-		GFF4626	0.51	-1.5
4,623,659	-		GFF4626	0.51	-1.8
4,623,659	-		GFF4626	0.51	-1.1
4,623,659	-		GFF4626	0.51	-0.9
4,623,668	-		GFF4626	0.52	+0.0
4,623,695	+		GFF4626	0.54	+0.3
4,623,695	+		GFF4626	0.54	-1.0
4,623,695	+		GFF4626	0.54	+1.4
4,623,696	-		GFF4626	0.54	-0.8
4,623,703	-		GFF4626	0.55	-1.2
4,623,703	-		GFF4626	0.55	+0.5
4,623,714	+		GFF4626	0.56	-1.7
4,623,729	-		GFF4626	0.57	-1.7
4,623,734	-		GFF4626	0.58	-0.7
4,623,736	+		GFF4626	0.58	+0.5
4,623,736	+		GFF4626	0.58	+0.0
4,623,736	+		GFF4626	0.58	-0.8
4,623,736	+		GFF4626	0.58	-0.9
4,623,749	-		GFF4626	0.59	+1.6
4,623,771	-		GFF4626	0.61	+0.5
4,623,783	-		GFF4626	0.62	-0.5
4,623,795	+		GFF4626	0.63	-1.9
4,623,803	-		GFF4626	0.64	-0.2
4,623,817	+		GFF4626	0.65	+0.3
4,623,825	-		GFF4626	0.66	-0.5
4,623,827	+		GFF4626	0.66	-0.8
4,623,827	+		GFF4626	0.66	-0.3
4,623,827	+		GFF4626	0.66	-1.8
4,623,838	+		GFF4626	0.67	-2.1
4,623,840	-		GFF4626	0.67	-1.5
4,623,842	+		GFF4626	0.67	-1.7
4,623,844	+		GFF4626	0.68	+0.8
4,623,844	+		GFF4626	0.68	-1.5
4,623,844	+		GFF4626	0.68	+0.1
4,623,844	+		GFF4626	0.68	+1.0
4,623,844	+		GFF4626	0.68	-0.4
4,623,844	+		GFF4626	0.68	+0.8
4,623,844	+		GFF4626	0.68	-1.5
4,623,844	+		GFF4626	0.68	-1.5
4,623,844	+		GFF4626	0.68	-1.0
4,623,844	+		GFF4626	0.68	+1.0
4,623,844	+		GFF4626	0.68	+2.0
4,623,844	+		GFF4626	0.68	-1.5
4,623,844	+		GFF4626	0.68	-1.4
4,623,844	+		GFF4626	0.68	+0.0
4,623,844	+		GFF4626	0.68	-1.2
4,623,844	+		GFF4626	0.68	-0.6
4,623,844	+		GFF4626	0.68	-1.4
4,623,844	+		GFF4626	0.68	-0.7
4,623,844	+		GFF4626	0.68	-1.5
4,623,844	+		GFF4626	0.68	+0.0
4,623,844	+		GFF4626	0.68	-0.0
4,623,844	+		GFF4626	0.68	+0.2
4,623,844	+		GFF4626	0.68	-0.8
4,623,844	+		GFF4626	0.68	-0.7
4,623,844	+		GFF4626	0.68	-1.9
4,623,844	+		GFF4626	0.68	-1.7
4,623,844	+		GFF4626	0.68	-0.7
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4,623,852	-		GFF4626	0.68	-0.2
4,623,852	-		GFF4626	0.68	-1.0
4,623,852	-		GFF4626	0.68	+0.1
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4,623,852	-		GFF4626	0.68	-0.6
4,623,852	-		GFF4626	0.68	-2.4
4,623,852	-		GFF4626	0.68	-0.4
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4,623,857	-		GFF4626	0.69	-0.9
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4,623,873	-		GFF4626	0.70	-0.5
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4,623,888	-		GFF4626	0.71	-0.6
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4,623,890	-		GFF4626	0.72	-1.6
4,623,890	-		GFF4626	0.72	-1.2
4,623,890	-		GFF4626	0.72	-1.8
4,623,890	-		GFF4626	0.72	-0.8
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4,623,916	+		GFF4626	0.74	-1.7
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4,623,919	-		GFF4626	0.74	-1.1
4,623,919	-		GFF4626	0.74	+0.3
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4,624,002	+		GFF4626	0.81	-2.0
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4,624,069	+		GFF4626	0.87	-2.0
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4,624,109	-				-0.8
4,624,120	-				-0.3
4,624,134	-				+1.9
4,624,136	+				+0.1
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4,624,186	+				-1.3
4,624,186	+				-1.1
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4,624,186	+				-1.5
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4,624,194	-				-1.6
4,624,194	-				+0.1
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4,624,194	-				-1.9
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4,624,306	+				-2.7
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