Strain Fitness in Sphingobium sp. HT1-2 around GFF2576

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,590,970	-				-2.4
2,590,991	-				+0.3
2,591,028	-				+0.0
2,591,041	-				-1.3
2,591,041	-				-0.5
2,591,079	+				-0.2
2,591,079	+				-0.9
2,591,084	+				+1.5
2,591,084	+				+1.5
2,591,084	+				-0.9
2,591,084	+				+0.5
2,591,084	+				+1.2
2,591,084	+				-0.5
2,591,084	+				+0.0
2,591,084	+				-1.6
2,591,084	+				-0.7
2,591,092	-				-2.4
2,591,092	-				-0.9
2,591,092	-				+1.4
2,591,092	-				+0.9
2,591,092	-				-2.0
2,591,092	-				+0.9
2,591,098	+				-1.4
2,591,098	+				+0.6
2,591,104	+				-1.5
2,591,106	-				-0.5
2,591,106	-				-1.0
2,591,106	-				-0.6
2,591,117	-				+1.5
2,591,117	-				-0.1
2,591,143	-				-0.2
2,591,146	+				+0.7
2,591,146	+				+0.4
2,591,149	-				+0.6
2,591,154	-				-0.7
2,591,154	-				-1.3
2,591,154	-				+0.7
2,591,154	-				+0.1
2,591,154	-				-0.1
2,591,156	+				-1.6
2,591,160	+				-1.1
2,591,160	+				+1.8
2,591,164	-				-0.4
2,591,165	+				+0.0
2,591,165	+				-0.2
2,591,165	+				-0.8
2,591,165	+				-0.3
2,591,168	-				-0.9
2,591,173	+				+1.1
2,591,173	-				+0.3
2,591,173	-				-2.8
2,591,186	-				-1.8
2,591,187	-				-0.5
2,591,188	+				+0.3
2,591,194	+		GFF2576	0.10	-0.5
2,591,194	+		GFF2576	0.10	+0.4
2,591,194	+		GFF2576	0.10	-1.8
2,591,196	-		GFF2576	0.11	-0.5
2,591,202	-		GFF2576	0.11	-0.1
2,591,202	-		GFF2576	0.11	+0.4
2,591,217	+		GFF2576	0.12	-1.1
2,591,226	-		GFF2576	0.13	-1.3
2,591,241	+		GFF2576	0.14	+1.1
2,591,252	+		GFF2576	0.15	-0.2
2,591,252	+		GFF2576	0.15	+0.4
2,591,275	+		GFF2576	0.16	-1.3
2,591,280	+		GFF2576	0.17	-1.1
2,591,280	+		GFF2576	0.17	-0.5
2,591,280	+		GFF2576	0.17	-1.6
2,591,281	-		GFF2576	0.17	-0.2
2,591,281	-		GFF2576	0.17	-0.7
2,591,281	-		GFF2576	0.17	+1.9
2,591,283	+		GFF2576	0.17	-0.8
2,591,285	+		GFF2576	0.17	+1.4
2,591,285	+		GFF2576	0.17	-0.2
2,591,287	+		GFF2576	0.17	+0.5
2,591,287	+		GFF2576	0.17	-1.4
2,591,287	+		GFF2576	0.17	-1.3
2,591,288	-		GFF2576	0.17	-0.6
2,591,293	-		GFF2576	0.18	-0.3
2,591,295	-		GFF2576	0.18	+0.8
2,591,295	-		GFF2576	0.18	-0.6
2,591,295	-		GFF2576	0.18	-0.1
2,591,295	-		GFF2576	0.18	+0.4
2,591,297	+		GFF2576	0.18	-0.5
2,591,297	+		GFF2576	0.18	-1.2
2,591,297	+		GFF2576	0.18	-0.3
2,591,297	+		GFF2576	0.18	-0.1
2,591,297	+		GFF2576	0.18	-1.0
2,591,297	+		GFF2576	0.18	-1.1
2,591,297	+		GFF2576	0.18	-0.6
2,591,305	+		GFF2576	0.18	+0.4
2,591,305	+		GFF2576	0.18	-0.1
2,591,305	+		GFF2576	0.18	+0.7
2,591,305	+		GFF2576	0.18	+1.0
2,591,305	+		GFF2576	0.18	+0.4
2,591,305	-		GFF2576	0.18	-1.5
2,591,305	-		GFF2576	0.18	-1.0
2,591,305	-		GFF2576	0.18	+0.3
2,591,305	-		GFF2576	0.18	-0.3
2,591,305	-		GFF2576	0.18	-1.4
2,591,305	-		GFF2576	0.18	-1.4
2,591,313	-		GFF2576	0.19	+0.9
2,591,313	-		GFF2576	0.19	-1.8
2,591,313	-		GFF2576	0.19	+0.5
2,591,313	-		GFF2576	0.19	+0.7
2,591,315	+		GFF2576	0.19	-1.7
2,591,340	+		GFF2576	0.21	+0.6
2,591,345	+		GFF2576	0.21	-0.5
2,591,348	-		GFF2576	0.22	+0.5
2,591,353	-		GFF2576	0.22	-0.7
2,591,353	-		GFF2576	0.22	-0.1
2,591,353	-		GFF2576	0.22	-0.8
2,591,367	+		GFF2576	0.23	-0.7
2,591,378	+		GFF2576	0.24	-0.6
2,591,404	+		GFF2576	0.26	+0.8
2,591,406	-		GFF2576	0.26	-0.5
2,591,410	+		GFF2576	0.26	-0.4
2,591,410	+		GFF2576	0.26	-2.0
2,591,420	+		GFF2576	0.27	-1.9
2,591,466	+		GFF2576	0.30	-0.5
2,591,466	+		GFF2576	0.30	+0.2
2,591,466	+		GFF2576	0.30	-2.2
2,591,474	-		GFF2576	0.31	+0.5
2,591,474	-		GFF2576	0.31	-1.4
2,591,489	+		GFF2576	0.32	-1.9
2,591,489	+		GFF2576	0.32	+0.7
2,591,489	+		GFF2576	0.32	-0.8
2,591,497	-		GFF2576	0.33	-1.9
2,591,497	-		GFF2576	0.33	-0.5
2,591,497	-		GFF2576	0.33	+1.0
2,591,497	-		GFF2576	0.33	-0.7
2,591,497	-		GFF2576	0.33	-0.3
2,591,497	-		GFF2576	0.33	-0.4
2,591,497	-		GFF2576	0.33	-0.4
2,591,508	+		GFF2576	0.33	-1.1
2,591,516	-		GFF2576	0.34	-1.6
2,591,516	-		GFF2576	0.34	-0.5
2,591,530	+		GFF2576	0.35	-0.7
2,591,534	+		GFF2576	0.35	-1.7
2,591,535	+		GFF2576	0.35	-0.4
2,591,538	-		GFF2576	0.36	-0.6
2,591,538	-		GFF2576	0.36	+0.9
2,591,538	-		GFF2576	0.36	-0.6
2,591,543	-		GFF2576	0.36	+0.0
2,591,543	-		GFF2576	0.36	-0.2
2,591,543	-		GFF2576	0.36	-1.4
2,591,545	+		GFF2576	0.36	-0.8
2,591,545	+		GFF2576	0.36	-0.5
2,591,547	+		GFF2576	0.36	-1.0
2,591,547	+		GFF2576	0.36	-0.6
2,591,557	+		GFF2576	0.37	+0.6
2,591,565	-		GFF2576	0.38	-1.5
2,591,565	-		GFF2576	0.38	+2.3
2,591,565	-		GFF2576	0.38	-0.5
2,591,575	-		GFF2576	0.38	-0.8
2,591,575	-		GFF2576	0.38	+0.9
2,591,575	-		GFF2576	0.38	+1.1
2,591,575	-		GFF2576	0.38	-0.7
2,591,575	-		GFF2576	0.38	+1.4
2,591,575	-		GFF2576	0.38	-1.1
2,591,581	+		GFF2576	0.39	-1.5
2,591,585	+		GFF2576	0.39	-1.2
2,591,586	+		GFF2576	0.39	+0.1
2,591,586	+		GFF2576	0.39	+0.5
2,591,590	+		GFF2576	0.39	-0.3
2,591,592	-		GFF2576	0.39	-0.3
2,591,595	+		GFF2576	0.40	-0.7
2,591,602	+		GFF2576	0.40	-0.8
2,591,602	+		GFF2576	0.40	-0.9
2,591,605	+		GFF2576	0.40	+1.3
2,591,611	+		GFF2576	0.41	-1.0
2,591,611	+		GFF2576	0.41	-0.4
2,591,612	+		GFF2576	0.41	+0.5
2,591,612	+		GFF2576	0.41	-0.5
2,591,612	+		GFF2576	0.41	+0.5
2,591,612	+		GFF2576	0.41	+2.0
2,591,612	+		GFF2576	0.41	-0.7
2,591,612	+		GFF2576	0.41	+0.4
2,591,612	+		GFF2576	0.41	-0.9
2,591,612	+		GFF2576	0.41	-1.9
2,591,612	+		GFF2576	0.41	+1.9
2,591,612	+		GFF2576	0.41	-1.0
2,591,612	+		GFF2576	0.41	+1.0
2,591,620	-		GFF2576	0.42	-0.6
2,591,620	-		GFF2576	0.42	+1.5
2,591,620	-		GFF2576	0.42	-0.5
2,591,620	-		GFF2576	0.42	-0.7
2,591,620	-		GFF2576	0.42	-0.9
2,591,620	-		GFF2576	0.42	-1.5
2,591,620	-		GFF2576	0.42	+0.6
2,591,620	-		GFF2576	0.42	-0.9
2,591,620	-		GFF2576	0.42	-0.9
2,591,633	+		GFF2576	0.42	-1.7
2,591,645	+		GFF2576	0.43	-1.5
2,591,648	-		GFF2576	0.44	-0.6
2,591,653	-		GFF2576	0.44	+0.6
2,591,653	-		GFF2576	0.44	-0.3
2,591,657	+		GFF2576	0.44	-0.3
2,591,681	+		GFF2576	0.46	-1.6
2,591,681	+		GFF2576	0.46	-0.4
2,591,681	+		GFF2576	0.46	-0.7
2,591,681	+		GFF2576	0.46	-0.3
2,591,681	+		GFF2576	0.46	+1.5
2,591,681	+		GFF2576	0.46	-0.7
2,591,681	+		GFF2576	0.46	-0.5
2,591,681	+		GFF2576	0.46	-1.9
2,591,681	+		GFF2576	0.46	-0.5
2,591,689	-		GFF2576	0.47	-0.1
2,591,689	-		GFF2576	0.47	-0.1
2,591,689	-		GFF2576	0.47	-0.3
2,591,689	-		GFF2576	0.47	-1.1
2,591,689	-		GFF2576	0.47	-1.3
2,591,689	-		GFF2576	0.47	+0.9
2,591,689	-		GFF2576	0.47	-0.5
2,591,689	-		GFF2576	0.47	-1.3
2,591,689	-		GFF2576	0.47	+0.4
2,591,689	-		GFF2576	0.47	-1.2
2,591,689	-		GFF2576	0.47	-0.6
2,591,689	-		GFF2576	0.47	-0.4
2,591,690	+		GFF2576	0.47	-0.3
2,591,708	+		GFF2576	0.48	-0.4
2,591,708	-		GFF2576	0.48	+0.4
2,591,715	+		GFF2576	0.48	+0.6
2,591,715	+		GFF2576	0.48	+0.9
2,591,715	+		GFF2576	0.48	-1.6
2,591,715	+		GFF2576	0.48	-0.1
2,591,715	+		GFF2576	0.48	+0.5
2,591,717	+		GFF2576	0.49	-0.8
2,591,724	+		GFF2576	0.49	-2.1
2,591,732	-		GFF2576	0.50	+0.4
2,591,732	-		GFF2576	0.50	+0.2
2,591,732	-		GFF2576	0.50	+0.7
2,591,736	+		GFF2576	0.50	-1.9
2,591,744	-		GFF2576	0.51	+0.3
2,591,754	-		GFF2576	0.51	+0.5
2,591,816	+		GFF2576	0.56	-0.1
2,591,816	+		GFF2576	0.56	-0.7
2,591,819	-		GFF2576	0.56	+0.4
2,591,869	+		GFF2576	0.60	-1.4
2,591,869	+		GFF2576	0.60	-0.1
2,591,880	+		GFF2576	0.61	-0.1
2,591,880	+		GFF2576	0.61	-1.8
2,591,888	-		GFF2576	0.61	-0.3
2,591,888	-		GFF2576	0.61	-0.5
2,591,888	-		GFF2576	0.61	-0.8
2,591,888	-		GFF2576	0.61	-1.6
2,591,895	+		GFF2576	0.62	-1.6
2,591,895	+		GFF2576	0.62	+0.6
2,591,903	-		GFF2576	0.62	-0.8
2,591,903	-		GFF2576	0.62	+0.6
2,591,903	-		GFF2576	0.62	+0.9
2,591,903	-		GFF2576	0.62	+0.5
2,591,903	-		GFF2576	0.62	-1.1
2,591,903	-		GFF2576	0.62	+0.1
2,591,913	+		GFF2576	0.63	-0.4
2,591,928	-		GFF2576	0.64	-2.0
2,591,931	+		GFF2576	0.64	-2.0
2,591,939	-		GFF2576	0.65	-0.4
2,591,941	+		GFF2576	0.65	+0.3
2,591,941	+		GFF2576	0.65	-1.1
2,591,941	+		GFF2576	0.65	-0.5
2,591,941	+		GFF2576	0.65	-1.2
2,591,941	+		GFF2576	0.65	-1.6
2,591,942	-		GFF2576	0.65	+0.3
2,591,949	-		GFF2576	0.66	+0.0
2,591,949	-		GFF2576	0.66	-0.5
2,591,949	-		GFF2576	0.66	-0.1
2,591,949	-		GFF2576	0.66	-1.1
2,591,954	+		GFF2576	0.66	-0.7
2,591,954	+		GFF2576	0.66	+0.3
2,591,976	+		GFF2576	0.68	-1.2
2,591,976	-		GFF2576	0.68	-0.3
2,591,987	+		GFF2576	0.68	+0.2
2,591,994	+		GFF2576	0.69	-0.5
2,591,994	+		GFF2576	0.69	+0.1
2,592,002	+		GFF2576	0.69	+0.5
2,592,009	+		GFF2576	0.70	-0.2
2,592,009	+		GFF2576	0.70	-1.3
2,592,034	-		GFF2576	0.72	+0.1
2,592,034	-		GFF2576	0.72	-0.5
2,592,036	+		GFF2576	0.72	-0.6
2,592,039	-		GFF2576	0.72	+0.1
2,592,055	+		GFF2576	0.73	+0.2
2,592,059	+		GFF2576	0.74	+0.2
2,592,067	+		GFF2576	0.74	+1.0
2,592,067	+		GFF2576	0.74	-0.6
2,592,074	-		GFF2576	0.75	+1.0
2,592,081	+		GFF2576	0.75	-0.7
2,592,089	-		GFF2576	0.76	-1.2
2,592,097	+		GFF2576	0.76	-0.7
2,592,108	-		GFF2576	0.77	-1.3
2,592,116	-		GFF2576	0.78	-0.7
2,592,144	+		GFF2576	0.80	+0.0
2,592,150	+		GFF2576	0.80	-0.2
2,592,152	-		GFF2576	0.80	-2.5
2,592,152	-		GFF2576	0.80	-0.5
2,592,160	+		GFF2576	0.81	-0.4
2,592,160	+		GFF2576	0.81	-1.7
2,592,160	+		GFF2576	0.81	-1.2
2,592,160	+		GFF2576	0.81	-0.3
2,592,168	-		GFF2576	0.82	-1.2
2,592,168	-		GFF2576	0.82	-0.4
2,592,168	-		GFF2576	0.82	-0.1
2,592,183	-		GFF2576	0.83	+1.3
2,592,190	+		GFF2576	0.83	+0.4
2,592,190	+		GFF2576	0.83	-1.3
2,592,190	+		GFF2576	0.83	+0.3
2,592,190	+		GFF2576	0.83	-1.8
2,592,192	+		GFF2576	0.83	+0.1
2,592,192	+		GFF2576	0.83	+0.3
2,592,192	+		GFF2576	0.83	-1.3
2,592,192	+		GFF2576	0.83	-1.6
2,592,192	+		GFF2576	0.83	-0.7
2,592,192	+		GFF2576	0.83	+0.6
2,592,197	+		GFF2576	0.84	+0.1
2,592,197	+		GFF2576	0.84	+0.1
2,592,200	-		GFF2576	0.84	-1.5
2,592,200	-		GFF2576	0.84	+1.6
2,592,200	-		GFF2576	0.84	-0.5
2,592,200	-		GFF2576	0.84	-1.0
2,592,200	-		GFF2576	0.84	-0.4
2,592,205	-		GFF2576	0.84	-0.3
2,592,210	+		GFF2576	0.85	-0.1
2,592,212	+		GFF2576	0.85	-1.1
2,592,232	+		GFF2576	0.86	-1.1
2,592,240	+		GFF2576	0.87	+0.4
2,592,240	-		GFF2576	0.87	+0.1
2,592,247	-		GFF2576	0.87	-0.0
2,592,248	-		GFF2576	0.87	-0.4
2,592,251	+		GFF2576	0.88	-1.7
2,592,259	-		GFF2576	0.88	-0.6
2,592,269	+		GFF2576	0.89	+0.8
2,592,272	-		GFF2576	0.89	-0.1
2,592,296	-				-1.3
2,592,309	+				-1.1
2,592,330	-				-0.6
2,592,349	+				-0.6
2,592,355	+				+0.4
2,592,357	+				-1.2
2,592,363	-				-0.5
2,592,365	-				-0.7
2,592,378	-				+1.5
2,592,380	+				-0.5
2,592,380	+				-1.9
2,592,380	+				-0.2
2,592,382	+				-1.0
2,592,388	-				+0.9
2,592,389	+				-1.4
2,592,395	+				-1.0
2,592,398	-				-1.1
2,592,403	-				-0.4
2,592,421	-				-0.6
2,592,421	-				+0.0
2,592,438	+				+0.1
2,592,495	+				-1.9
2,592,501	+				+1.3
2,592,501	+				-0.6
2,592,501	+				-1.9
2,592,502	+				-1.3
2,592,502	-				-0.4
2,592,509	-				+0.1
2,592,509	-				-1.8
2,592,509	-				-1.2
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