Strain Fitness in Sphingobium sp. HT1-2 around GFF2274

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,300,793	-		GFF2273	0.34	-0.9
2,300,795	-		GFF2273	0.35	-1.5
2,300,802	+		GFF2273	0.35	-2.3
2,300,802	+		GFF2273	0.35	+0.9
2,300,809	+		GFF2273	0.36	+1.4
2,300,809	+		GFF2273	0.36	+0.5
2,300,810	-		GFF2273	0.36	-1.1
2,300,810	-		GFF2273	0.36	-1.6
2,300,810	-		GFF2273	0.36	+2.4
2,300,817	-		GFF2273	0.36	+0.2
2,300,837	+		GFF2273	0.38	-1.1
2,300,853	+		GFF2273	0.39	-0.0
2,300,876	+		GFF2273	0.41	+0.1
2,300,901	-		GFF2273	0.43	+0.7
2,300,938	-		GFF2273	0.45	-0.5
2,300,954	+		GFF2273	0.47	-0.9
2,300,955	-		GFF2273	0.47	-0.1
2,300,960	+		GFF2273	0.47	-0.8
2,300,966	+		GFF2273	0.47	-1.1
2,300,974	-		GFF2273	0.48	+1.3
2,300,980	-		GFF2273	0.49	-1.5
2,300,986	+		GFF2273	0.49	-0.0
2,300,991	+		GFF2273	0.49	+0.8
2,300,991	+		GFF2273	0.49	-0.8
2,300,991	+		GFF2273	0.49	-1.1
2,300,999	-		GFF2273	0.50	-2.2
2,300,999	-		GFF2273	0.50	+0.8
2,300,999	-		GFF2273	0.50	+1.0
2,300,999	-		GFF2273	0.50	+0.1
2,301,015	+		GFF2273	0.51	+0.2
2,301,066	+		GFF2273	0.55	+0.7
2,301,072	+		GFF2273	0.55	-0.0
2,301,080	-		GFF2273	0.56	+0.5
2,301,107	+		GFF2273	0.58	-1.0
2,301,117	+		GFF2273	0.59	+0.8
2,301,125	-		GFF2273	0.59	+1.9
2,301,125	-		GFF2273	0.59	-0.1
2,301,150	-		GFF2273	0.61	-0.4
2,301,159	+		GFF2273	0.62	+0.1
2,301,167	-		GFF2273	0.63	-0.3
2,301,170	-		GFF2273	0.63	-0.5
2,301,204	+		GFF2273	0.65	+0.3
2,301,213	-		GFF2273	0.66	-1.3
2,301,214	+		GFF2273	0.66	+0.8
2,301,272	+		GFF2273	0.71	-1.1
2,301,272	+		GFF2273	0.71	-0.3
2,301,280	-		GFF2273	0.71	-0.4
2,301,280	-		GFF2273	0.71	+1.1
2,301,280	-		GFF2273	0.71	-0.8
2,301,280	-		GFF2273	0.71	+1.1
2,301,296	-		GFF2273	0.72	-1.5
2,301,335	+		GFF2273	0.75	+0.3
2,301,335	+		GFF2273	0.75	+0.8
2,301,343	-		GFF2273	0.76	+0.1
2,301,345	+		GFF2273	0.76	+1.0
2,301,348	-		GFF2273	0.76	+1.6
2,301,353	-		GFF2273	0.77	-0.5
2,301,361	-		GFF2273	0.77	-1.6
2,301,375	-		GFF2273	0.78	-2.1
2,301,401	-		GFF2273	0.80	-1.4
2,301,472	+		GFF2273	0.86	-0.6
2,301,473	-		GFF2273	0.86	-0.8
2,301,513	+		GFF2273	0.89	-0.5
2,301,515	-		GFF2273	0.89	-1.0
2,301,562	+				+0.4
2,301,585	-				+1.4
2,301,594	+				-0.3
2,301,594	+				-0.8
2,301,601	+				-0.5
2,301,609	+				-0.8
2,301,617	-				-0.1
2,301,644	+				-1.1
2,301,658	+				+0.8
2,301,715	-				-0.1
2,301,745	+				+0.2
2,301,748	-				-0.9
2,301,749	-				-0.2
2,301,753	-				-0.9
2,301,753	-				+1.2
2,301,764	+				+0.2
2,301,772	-				+0.4
2,301,800	+				+0.2
2,301,815	+				-0.9
2,301,815	+				-0.2
2,301,815	+				+0.8
2,301,825	-				-0.1
2,301,850	+		GFF2274	0.17	+0.4
2,301,855	-		GFF2274	0.19	-1.5
2,301,858	-		GFF2274	0.19	-0.3
2,301,858	-		GFF2274	0.19	+2.0
2,301,858	-		GFF2274	0.19	-0.8
2,301,873	+		GFF2274	0.24	-1.0
2,301,873	+		GFF2274	0.24	-0.7
2,301,876	-		GFF2274	0.25	-0.5
2,301,878	+		GFF2274	0.25	-0.5
2,301,881	-		GFF2274	0.26	-1.3
2,301,886	-		GFF2274	0.28	-0.1
2,301,886	-		GFF2274	0.28	-0.9
2,301,901	+		GFF2274	0.32	+0.8
2,301,902	-		GFF2274	0.32	-1.3
2,301,902	-		GFF2274	0.32	-0.8
2,301,906	+		GFF2274	0.34	+0.8
2,301,909	-		GFF2274	0.35	-0.3
2,301,912	+		GFF2274	0.35	+0.5
2,301,914	-		GFF2274	0.36	-0.7
2,301,914	-		GFF2274	0.36	-0.5
2,301,962	+		GFF2274	0.50	-0.1
2,301,972	-		GFF2274	0.53	+0.8
2,301,972	-		GFF2274	0.53	-2.6
2,301,972	-		GFF2274	0.53	-1.4
2,301,982	-		GFF2274	0.56	-0.3
2,301,990	-		GFF2274	0.58	-0.0
2,301,994	+		GFF2274	0.60	-1.9
2,302,035	+		GFF2274	0.72	-1.0
2,302,042	+		GFF2274	0.74	+0.2
2,302,045	-		GFF2274	0.75	-1.8
2,302,074	+		GFF2274	0.83	+0.1
2,302,074	+		GFF2274	0.83	-0.3
2,302,074	+		GFF2274	0.83	+0.1
2,302,074	+		GFF2274	0.83	+0.8
2,302,074	+		GFF2274	0.83	-2.3
2,302,074	+		GFF2274	0.83	+1.2
2,302,074	+		GFF2274	0.83	-2.1
2,302,082	-		GFF2274	0.86	-0.6
2,302,082	-		GFF2274	0.86	-0.5
2,302,096	-		GFF2274	0.90	+1.0
2,302,099	+				+0.3
2,302,172	+				-0.9
2,302,206	+				+0.7
2,302,211	+				-1.8
2,302,211	+				-0.8
2,302,211	+				-1.3
2,302,219	-		GFF2275	0.10	-0.9
2,302,219	-		GFF2275	0.10	-1.3
2,302,219	-		GFF2275	0.10	+0.6
2,302,219	-		GFF2275	0.10	+0.5
2,302,238	+		GFF2275	0.13	+0.2
2,302,238	+		GFF2275	0.13	-0.9
2,302,238	+		GFF2275	0.13	+0.4
2,302,246	-		GFF2275	0.14	-0.5
2,302,259	+		GFF2275	0.15	-0.4
2,302,264	+		GFF2275	0.16	-0.7
2,302,264	+		GFF2275	0.16	-0.2
2,302,269	+		GFF2275	0.17	-0.4
2,302,269	+		GFF2275	0.17	-0.4
2,302,269	+		GFF2275	0.17	-0.9
2,302,269	+		GFF2275	0.17	-1.5
2,302,274	+		GFF2275	0.17	-1.7
2,302,277	-		GFF2275	0.18	+0.0
2,302,277	-		GFF2275	0.18	-1.5
2,302,277	-		GFF2275	0.18	-0.8
2,302,277	-		GFF2275	0.18	+1.3
2,302,281	+		GFF2275	0.18	-0.9
2,302,298	-		GFF2275	0.20	-1.2
2,302,321	-		GFF2275	0.23	-1.2
2,302,321	-		GFF2275	0.23	+0.2
2,302,325	+		GFF2275	0.23	-1.5
2,302,328	-		GFF2275	0.24	+0.7
2,302,335	+		GFF2275	0.25	-1.5
2,302,343	-		GFF2275	0.26	-1.0
2,302,350	-		GFF2275	0.26	-0.2
2,302,377	+		GFF2275	0.30	+0.7
2,302,381	+		GFF2275	0.30	+0.1
2,302,409	+		GFF2275	0.34	+0.1
2,302,414	+		GFF2275	0.34	-1.7
2,302,430	+		GFF2275	0.36	+0.7
2,302,435	+		GFF2275	0.37	-1.8
2,302,474	+		GFF2275	0.42	+1.0
2,302,486	-		GFF2275	0.43	+0.8
2,302,486	-		GFF2275	0.43	-0.7
2,302,491	-		GFF2275	0.44	-0.2
2,302,500	+		GFF2275	0.45	-1.6
2,302,506	+		GFF2275	0.46	+0.2
2,302,507	+		GFF2275	0.46	+0.9
2,302,508	-		GFF2275	0.46	+0.4
2,302,525	-		GFF2275	0.48	-0.6
2,302,525	-		GFF2275	0.48	-0.6
2,302,545	+		GFF2275	0.50	+1.4
2,302,556	+		GFF2275	0.52	-0.4
2,302,561	+		GFF2275	0.52	-1.6
2,302,576	+		GFF2275	0.54	-0.1
2,302,579	-		GFF2275	0.55	-1.1
2,302,581	-		GFF2275	0.55	-0.7
2,302,615	+		GFF2275	0.59	-0.0
2,302,630	-		GFF2275	0.61	-1.8
2,302,632	+		GFF2275	0.61	+0.6
2,302,632	+		GFF2275	0.61	-0.5
2,302,632	+		GFF2275	0.61	+0.0
2,302,632	+		GFF2275	0.61	-1.0
2,302,633	-		GFF2275	0.61	-1.3
2,302,635	-		GFF2275	0.61	-0.3
2,302,640	-		GFF2275	0.62	-0.1
2,302,640	-		GFF2275	0.62	+1.7
2,302,668	+		GFF2275	0.65	-1.9
2,302,683	-		GFF2275	0.67	-0.9
2,302,683	-		GFF2275	0.67	+0.2
2,302,683	-		GFF2275	0.67	-0.7
2,302,693	-		GFF2275	0.69	-1.2
2,302,702	+		GFF2275	0.70	-1.2
2,302,702	+		GFF2275	0.70	+0.2
2,302,702	+		GFF2275	0.70	+1.2
2,302,702	+		GFF2275	0.70	-1.2
2,302,702	+		GFF2275	0.70	+0.3
2,302,710	-		GFF2275	0.71	+1.2
2,302,710	-		GFF2275	0.71	-0.8
2,302,710	-		GFF2275	0.71	-1.1
2,302,715	-		GFF2275	0.71	+0.7
2,302,755	+		GFF2275	0.76	+0.8
2,302,758	-		GFF2275	0.76	-1.5
2,302,765	+		GFF2275	0.77	+1.0
2,302,765	+		GFF2275	0.77	-0.6
2,302,765	+		GFF2275	0.77	-0.7
2,302,770	+		GFF2275	0.78	+0.3
2,302,770	+		GFF2275	0.78	+0.3
2,302,770	+		GFF2275	0.78	+0.3
2,302,773	-		GFF2275	0.78	-0.6
2,302,778	-		GFF2275	0.79	-2.1
2,302,778	-		GFF2275	0.79	-0.4
2,302,796	-		GFF2275	0.81	-0.3
2,302,796	-		GFF2275	0.81	-0.8
2,302,811	+		GFF2275	0.83	-0.4
2,302,811	+		GFF2275	0.83	-0.8
2,302,819	-		GFF2275	0.84	-0.1
2,302,845	+		GFF2275	0.87	-0.2
2,302,845	+		GFF2275	0.87	+0.8
2,302,857	+		GFF2275	0.89	+0.4
2,302,857	+		GFF2275	0.89	-1.2
2,302,867	+		GFF2275	0.90	-0.6
2,302,882	+				-0.2
2,302,929	+				+1.0
2,302,929	+				-0.3
2,302,929	+				-0.6
2,302,937	-				-0.5
2,302,942	-				-0.8
2,302,956	+				+0.8
2,302,960	-				-0.4
2,302,964	-				-0.6
2,302,964	-				+0.3
2,302,964	-				-0.6
2,303,027	-				-0.5
2,303,034	+				-0.5
2,303,034	+				+0.1
2,303,041	+				-0.5
2,303,054	-				-0.7
2,303,056	+				+1.1
2,303,056	+				-0.7
2,303,056	+				-0.5
2,303,056	+				-0.6
2,303,056	+				-0.8