Strain Fitness in Sphingobium sp. HT1-2 around GFF2238

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,265,261	-		GFF2237	0.13	-1.4
2,265,261	-		GFF2237	0.13	-1.3
2,265,263	+		GFF2237	0.13	-0.4
2,265,263	+		GFF2237	0.13	+1.0
2,265,263	+		GFF2237	0.13	-0.7
2,265,263	+		GFF2237	0.13	+0.5
2,265,271	-		GFF2237	0.14	-0.5
2,265,271	-		GFF2237	0.14	+0.1
2,265,271	-		GFF2237	0.14	-0.8
2,265,280	+		GFF2237	0.14	-1.0
2,265,315	+		GFF2237	0.17	+0.5
2,265,331	-		GFF2237	0.19	-0.1
2,265,331	-		GFF2237	0.19	+0.2
2,265,351	+		GFF2237	0.21	-0.6
2,265,351	-		GFF2237	0.21	+0.3
2,265,373	+		GFF2237	0.22	-1.0
2,265,378	+		GFF2237	0.23	-0.9
2,265,379	-		GFF2237	0.23	-0.9
2,265,379	-		GFF2237	0.23	-0.3
2,265,381	-		GFF2237	0.23	-2.1
2,265,385	+		GFF2237	0.23	-0.6
2,265,385	+		GFF2237	0.23	-0.7
2,265,386	-		GFF2237	0.24	-0.9
2,265,386	-		GFF2237	0.24	+0.1
2,265,386	-		GFF2237	0.24	-0.6
2,265,388	-		GFF2237	0.24	+0.3
2,265,391	+		GFF2237	0.24	+0.1
2,265,392	+		GFF2237	0.24	+0.6
2,265,393	-		GFF2237	0.24	-1.9
2,265,393	-		GFF2237	0.24	+0.4
2,265,399	-		GFF2237	0.25	+0.7
2,265,400	-		GFF2237	0.25	+0.3
2,265,400	-		GFF2237	0.25	-0.2
2,265,400	-		GFF2237	0.25	+0.7
2,265,400	-		GFF2237	0.25	+0.1
2,265,400	-		GFF2237	0.25	-0.8
2,265,400	-		GFF2237	0.25	+1.0
2,265,400	-		GFF2237	0.25	-0.2
2,265,400	-		GFF2237	0.25	-2.5
2,265,406	+		GFF2237	0.25	-0.5
2,265,410	-		GFF2237	0.26	-0.6
2,265,414	+		GFF2237	0.26	-0.5
2,265,414	-		GFF2237	0.26	-0.5
2,265,481	-		GFF2237	0.32	+0.7
2,265,511	-		GFF2237	0.34	-1.0
2,265,513	+		GFF2237	0.35	-0.5
2,265,530	+		GFF2237	0.36	-1.2
2,265,535	+		GFF2237	0.37	+0.7
2,265,537	+		GFF2237	0.37	-0.2
2,265,537	+		GFF2237	0.37	-0.8
2,265,537	+		GFF2237	0.37	-0.2
2,265,537	+		GFF2237	0.37	+0.0
2,265,537	+		GFF2237	0.37	-0.3
2,265,537	+		GFF2237	0.37	+1.8
2,265,537	+		GFF2237	0.37	+0.6
2,265,537	+		GFF2237	0.37	+0.5
2,265,537	+		GFF2237	0.37	+0.6
2,265,537	+		GFF2237	0.37	-1.2
2,265,537	+		GFF2237	0.37	-0.5
2,265,537	+		GFF2237	0.37	-0.6
2,265,537	+		GFF2237	0.37	-1.9
2,265,537	+		GFF2237	0.37	+0.1
2,265,537	+		GFF2237	0.37	+0.3
2,265,537	+		GFF2237	0.37	+0.3
2,265,542	+		GFF2237	0.37	-1.0
2,265,543	-		GFF2237	0.37	+0.2
2,265,545	-		GFF2237	0.37	+0.3
2,265,545	-		GFF2237	0.37	-1.2
2,265,545	-		GFF2237	0.37	-0.6
2,265,545	-		GFF2237	0.37	-1.2
2,265,545	-		GFF2237	0.37	-1.2
2,265,545	-		GFF2237	0.37	-0.1
2,265,545	-		GFF2237	0.37	-1.3
2,265,545	-		GFF2237	0.37	-1.9
2,265,545	-		GFF2237	0.37	+1.5
2,265,545	-		GFF2237	0.37	-1.0
2,265,545	-		GFF2237	0.37	+0.5
2,265,545	-		GFF2237	0.37	-1.3
2,265,552	+		GFF2237	0.38	-0.5
2,265,552	+		GFF2237	0.38	-0.0
2,265,552	+		GFF2237	0.38	-1.4
2,265,552	+		GFF2237	0.38	+0.7
2,265,559	-		GFF2237	0.39	-0.1
2,265,560	-		GFF2237	0.39	-1.0
2,265,560	-		GFF2237	0.39	+1.1
2,265,560	-		GFF2237	0.39	+0.4
2,265,560	-		GFF2237	0.39	-1.0
2,265,560	-		GFF2237	0.39	+0.1
2,265,560	-		GFF2237	0.39	-1.2
2,265,560	-		GFF2237	0.39	+0.4
2,265,586	-		GFF2237	0.41	+1.5
2,265,586	-		GFF2237	0.41	+0.4
2,265,586	-		GFF2237	0.41	+1.0
2,265,604	-		GFF2237	0.43	-0.7
2,265,610	+		GFF2237	0.43	-1.7
2,265,610	+		GFF2237	0.43	-0.6
2,265,610	+		GFF2237	0.43	-0.9
2,265,621	+		GFF2237	0.44	+0.2
2,265,633	+		GFF2237	0.45	-1.0
2,265,679	+		GFF2237	0.49	+0.3
2,265,684	+		GFF2237	0.50	-1.2
2,265,684	+		GFF2237	0.50	-0.7
2,265,684	+		GFF2237	0.50	+0.1
2,265,687	-		GFF2237	0.50	-1.3
2,265,687	-		GFF2237	0.50	-0.2
2,265,692	-		GFF2237	0.50	-0.7
2,265,697	+		GFF2237	0.51	-0.1
2,265,697	+		GFF2237	0.51	-0.9
2,265,697	-		GFF2237	0.51	+0.5
2,265,714	+		GFF2237	0.52	+0.1
2,265,714	+		GFF2237	0.52	-0.7
2,265,714	+		GFF2237	0.52	+0.5
2,265,722	-		GFF2237	0.53	-1.3
2,265,730	-		GFF2237	0.54	-0.8
2,265,745	+		GFF2237	0.55	-0.1
2,265,745	+		GFF2237	0.55	-0.8
2,265,745	+		GFF2237	0.55	-0.3
2,265,748	-		GFF2237	0.55	+0.5
2,265,748	-		GFF2237	0.55	+0.4
2,265,753	-		GFF2237	0.56	-0.9
2,265,753	-		GFF2237	0.56	+1.1
2,265,753	-		GFF2237	0.56	-0.2
2,265,753	-		GFF2237	0.56	+1.1
2,265,753	-		GFF2237	0.56	-1.7
2,265,758	+		GFF2237	0.56	-1.3
2,265,758	+		GFF2237	0.56	-0.3
2,265,758	+		GFF2237	0.56	+0.9
2,265,758	+		GFF2237	0.56	-1.3
2,265,758	+		GFF2237	0.56	-0.6
2,265,765	+		GFF2237	0.57	-0.2
2,265,766	-		GFF2237	0.57	-1.2
2,265,766	-		GFF2237	0.57	-0.2
2,265,766	-		GFF2237	0.57	+1.1
2,265,766	-		GFF2237	0.57	-1.5
2,265,766	-		GFF2237	0.57	-1.0
2,265,766	-		GFF2237	0.57	+0.1
2,265,781	-		GFF2237	0.58	-1.6
2,265,785	+		GFF2237	0.58	+0.2
2,265,785	+		GFF2237	0.58	+0.7
2,265,785	+		GFF2237	0.58	+0.5
2,265,796	+		GFF2237	0.59	-0.4
2,265,796	+		GFF2237	0.59	-0.3
2,265,804	-		GFF2237	0.60	+0.5
2,265,806	+		GFF2237	0.60	-1.0
2,265,809	-		GFF2237	0.60	+0.2
2,265,809	-		GFF2237	0.60	-0.8
2,265,813	+		GFF2237	0.61	+0.9
2,265,847	-		GFF2237	0.64	-1.0
2,265,892	+		GFF2237	0.68	-0.6
2,265,901	+		GFF2237	0.68	-0.1
2,265,909	+		GFF2237	0.69	+0.3
2,265,925	+		GFF2237	0.70	-1.1
2,265,950	+		GFF2237	0.73	-0.9
2,265,950	+		GFF2237	0.73	-0.2
2,265,955	+		GFF2237	0.73	-0.7
2,265,955	+		GFF2237	0.73	-1.3
2,265,955	+		GFF2237	0.73	-1.0
2,265,955	+		GFF2237	0.73	+0.0
2,265,955	+		GFF2237	0.73	-1.6
2,265,955	+		GFF2237	0.73	-0.1
2,265,955	+		GFF2237	0.73	-0.2
2,265,955	+		GFF2237	0.73	+1.0
2,265,955	+		GFF2237	0.73	-0.2
2,265,958	-		GFF2237	0.73	+0.6
2,265,958	-		GFF2237	0.73	+0.4
2,265,958	-		GFF2237	0.73	+0.5
2,265,963	-		GFF2237	0.74	-0.7
2,265,963	-		GFF2237	0.74	-1.9
2,265,963	-		GFF2237	0.74	+0.8
2,265,963	-		GFF2237	0.74	-2.3
2,265,965	+		GFF2237	0.74	-1.3
2,265,988	+		GFF2237	0.76	-2.2
2,265,997	-		GFF2237	0.77	-1.8
2,266,015	+		GFF2237	0.78	-0.5
2,266,022	+		GFF2237	0.79	-0.7
2,266,022	+		GFF2237	0.79	-0.5
2,266,030	-		GFF2237	0.80	-1.1
2,266,032	+		GFF2237	0.80	+0.4
2,266,032	+		GFF2237	0.80	-0.2
2,266,032	+		GFF2237	0.80	-1.2
2,266,032	+		GFF2237	0.80	-1.4
2,266,032	+		GFF2237	0.80	-1.4
2,266,032	+		GFF2237	0.80	-1.3
2,266,032	+		GFF2237	0.80	-0.9
2,266,032	+		GFF2237	0.80	-1.0
2,266,032	+		GFF2237	0.80	+2.2
2,266,032	+		GFF2237	0.80	-0.7
2,266,032	+		GFF2237	0.80	-1.7
2,266,040	-		GFF2237	0.81	-0.8
2,266,040	-		GFF2237	0.81	+0.0
2,266,040	-		GFF2237	0.81	-0.8
2,266,040	-		GFF2237	0.81	+0.0
2,266,040	-		GFF2237	0.81	-0.2
2,266,040	-		GFF2237	0.81	-0.3
2,266,040	-		GFF2237	0.81	-0.6
2,266,040	-		GFF2237	0.81	-0.6
2,266,040	-		GFF2237	0.81	-1.6
2,266,040	-		GFF2237	0.81	+0.3
2,266,040	-		GFF2237	0.81	-0.7
2,266,040	-		GFF2237	0.81	-0.8
2,266,040	-		GFF2237	0.81	+0.3
2,266,040	-		GFF2237	0.81	-1.3
2,266,047	+		GFF2237	0.81	+0.7
2,266,047	+		GFF2237	0.81	-1.3
2,266,055	-		GFF2237	0.82	+0.8
2,266,055	-		GFF2237	0.82	+2.0
2,266,055	-		GFF2237	0.82	-1.1
2,266,055	-		GFF2237	0.82	-0.0
2,266,055	-		GFF2237	0.82	-0.5
2,266,057	+		GFF2237	0.82	+1.0
2,266,057	+		GFF2237	0.82	+0.1
2,266,057	+		GFF2237	0.82	-0.6
2,266,057	+		GFF2237	0.82	+0.5
2,266,062	+		GFF2237	0.82	-1.2
2,266,062	+		GFF2237	0.82	+0.4
2,266,065	-		GFF2237	0.83	-0.2
2,266,065	-		GFF2237	0.83	+0.1
2,266,065	-		GFF2237	0.83	-0.5
2,266,065	-		GFF2237	0.83	-1.3
2,266,065	-		GFF2237	0.83	+1.3
2,266,065	-		GFF2237	0.83	-1.6
2,266,078	+		GFF2237	0.84	-1.2
2,266,086	-		GFF2237	0.85	-0.9
2,266,086	-		GFF2237	0.85	+0.8
2,266,118	+		GFF2237	0.87	-0.3
2,266,126	-		GFF2237	0.88	-1.7
2,266,132	-		GFF2237	0.89	+0.7
2,266,132	-		GFF2237	0.89	-1.4
2,266,134	+		GFF2237	0.89	-0.3
2,266,168	-				-1.5
2,266,176	+				-0.2
2,266,177	+				-0.2
2,266,184	+				+0.2
2,266,184	+				-0.2
2,266,184	-				-0.7
2,266,185	-				-1.3
2,266,185	-				-1.9
2,266,185	-				-1.0
2,266,185	-				-1.3
2,266,185	-				-1.8
2,266,185	-				-1.1
2,266,185	-				-0.3
2,266,185	-				-0.2
2,266,192	-				-1.5
2,266,192	-				+0.6
2,266,192	-				-2.0
2,266,230	+				+0.2
2,266,230	+				+1.8
2,266,230	+				-0.2
2,266,230	+				+0.5
2,266,230	+				-0.3
2,266,238	-				+0.3
2,266,238	-				-0.5
2,266,248	+				-0.7
2,266,272	+				-1.0
2,266,276	+				-0.7
2,266,276	+				-1.1
2,266,281	+				+1.1
2,266,289	+				-0.5
2,266,289	-				-1.2
2,266,289	-				-1.9
2,266,307	-				-0.9
2,266,335	+				-0.0
2,266,338	-		GFF2238	0.10	-1.6
2,266,338	-		GFF2238	0.10	-0.8
2,266,338	-		GFF2238	0.10	-0.5
2,266,338	-		GFF2238	0.10	-0.4
2,266,341	+		GFF2238	0.11	-0.5
2,266,341	+		GFF2238	0.11	-1.4
2,266,343	-		GFF2238	0.11	-1.4
2,266,343	-		GFF2238	0.11	-1.1
2,266,343	-		GFF2238	0.11	-0.2
2,266,343	-		GFF2238	0.11	-0.5
2,266,348	-		GFF2238	0.12	+0.2
2,266,349	-		GFF2238	0.12	-1.2
2,266,351	+		GFF2238	0.12	-0.1
2,266,351	+		GFF2238	0.12	-0.8
2,266,351	+		GFF2238	0.12	+0.5
2,266,359	-		GFF2238	0.13	-0.9
2,266,414	+		GFF2238	0.20	-0.2
2,266,414	+		GFF2238	0.20	-0.7
2,266,422	-		GFF2238	0.21	-0.5
2,266,422	-		GFF2238	0.21	+0.2
2,266,424	+		GFF2238	0.22	-0.5
2,266,424	-		GFF2238	0.22	+0.4
2,266,429	-		GFF2238	0.22	-0.5
2,266,435	+		GFF2238	0.23	+0.5
2,266,440	+		GFF2238	0.24	-2.3
2,266,443	-		GFF2238	0.24	+0.4
2,266,456	+		GFF2238	0.26	+0.0
2,266,456	+		GFF2238	0.26	+0.2
2,266,456	+		GFF2238	0.26	-0.6
2,266,464	-		GFF2238	0.27	-0.6
2,266,464	-		GFF2238	0.27	-0.7
2,266,464	-		GFF2238	0.27	+0.4
2,266,464	-		GFF2238	0.27	+1.5
2,266,464	-		GFF2238	0.27	-1.4
2,266,464	-		GFF2238	0.27	-1.8
2,266,464	-		GFF2238	0.27	+0.5
2,266,497	-		GFF2238	0.31	+1.2
2,266,502	+		GFF2238	0.32	-1.8
2,266,502	+		GFF2238	0.32	-1.3
2,266,502	+		GFF2238	0.32	+0.9
2,266,502	+		GFF2238	0.32	-0.9
2,266,507	+		GFF2238	0.33	-0.3
2,266,510	-		GFF2238	0.33	-0.7
2,266,510	-		GFF2238	0.33	-0.2
2,266,515	-		GFF2238	0.34	+1.1
2,266,522	+		GFF2238	0.35	-0.6
2,266,543	-		GFF2238	0.37	-0.9
2,266,581	+		GFF2238	0.42	-0.5
2,266,586	+		GFF2238	0.43	-0.7
2,266,586	+		GFF2238	0.43	-0.9
2,266,588	-		GFF2238	0.43	+0.8
2,266,589	-		GFF2238	0.43	-0.0
2,266,589	-		GFF2238	0.43	-0.7
2,266,589	-		GFF2238	0.43	+1.0
2,266,589	-		GFF2238	0.43	-0.3
2,266,591	+		GFF2238	0.44	+0.5
2,266,594	-		GFF2238	0.44	-1.6
2,266,594	-		GFF2238	0.44	-0.5
2,266,594	-		GFF2238	0.44	-0.9
2,266,597	-		GFF2238	0.44	-0.4
2,266,599	-		GFF2238	0.45	+0.0
2,266,599	-		GFF2238	0.45	-1.7
2,266,599	-		GFF2238	0.45	+1.2
2,266,599	-		GFF2238	0.45	-0.2
2,266,631	-		GFF2238	0.49	+0.8
2,266,683	+		GFF2238	0.56	-1.5
2,266,683	+		GFF2238	0.56	+0.7
2,266,683	+		GFF2238	0.56	-0.1
2,266,683	+		GFF2238	0.56	-1.2
2,266,691	-		GFF2238	0.57	+1.1
2,266,711	+		GFF2238	0.59	-0.2
2,266,719	-		GFF2238	0.60	-0.6
2,266,726	+		GFF2238	0.61	+2.4
2,266,726	+		GFF2238	0.61	+0.1
2,266,727	-		GFF2238	0.62	+1.1
2,266,732	+		GFF2238	0.62	+0.7
2,266,734	+		GFF2238	0.62	-0.7
2,266,740	-		GFF2238	0.63	-0.3
2,266,744	-		GFF2238	0.64	+0.2
2,266,764	+		GFF2238	0.66	-0.8
2,266,782	+		GFF2238	0.69	-0.0
2,266,789	-		GFF2238	0.70	+0.7
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