Strain Fitness in Sphingobium sp. HT1-2 around GFF1277

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,303,240	+		GFF1275	0.50	+1.6
1,303,297	+		GFF1275	0.54	-0.7
1,303,297	+		GFF1275	0.54	+0.7
1,303,305	-		GFF1275	0.55	-0.4
1,303,338	-		GFF1275	0.58	+0.7
1,303,342	+		GFF1275	0.58	+0.9
1,303,350	-		GFF1275	0.58	-0.7
1,303,350	-		GFF1275	0.58	-0.5
1,303,384	+		GFF1275	0.61	+0.9
1,303,495	+		GFF1275	0.69	+0.6
1,303,509	+		GFF1275	0.71	-1.1
1,303,531	+		GFF1275	0.72	+1.2
1,303,605	+		GFF1275	0.78	-0.6
1,303,654	+		GFF1275	0.82	+0.6
1,303,662	-		GFF1275	0.82	+1.2
1,303,662	-		GFF1275	0.82	-0.3
1,303,679	+		GFF1275	0.83	+0.4
1,303,685	-		GFF1275	0.84	+0.5
1,303,687	-		GFF1275	0.84	+0.5
1,303,687	-		GFF1275	0.84	+0.7
1,303,695	-		GFF1275	0.85	+0.6
1,303,697	+		GFF1275	0.85	-1.2
1,303,697	+		GFF1275	0.85	-0.6
1,303,734	+		GFF1275	0.88	+0.0
1,303,766	+				+1.5
1,303,767	+				-0.6
1,303,767	+				-0.6
1,303,774	-				+0.8
1,303,774	-				+0.9
1,303,775	-				-1.0
1,303,775	-				-1.8
1,303,775	-				-0.2
1,303,779	-				-0.3
1,303,779	-				+1.2
1,303,782	+				+0.2
1,303,782	+				-0.2
1,303,782	+				-1.8
1,303,782	+				+0.4
1,303,782	+				-0.6
1,303,782	+				+1.4
1,303,782	+				-0.8
1,303,782	+				-0.4
1,303,782	+				-0.6
1,303,782	+				+0.5
1,303,782	+				+0.9
1,303,782	+				+0.3
1,303,790	-				-0.2
1,303,790	-				+0.8
1,303,790	-				-1.0
1,303,790	-				-0.6
1,303,790	-				-0.1
1,303,790	-				+0.2
1,303,790	-				-1.3
1,303,790	-				+0.1
1,303,790	-				-1.0
1,303,790	-				+0.7
1,303,790	-				-0.7
1,303,795	-				+1.2
1,303,800	-				-0.6
1,303,836	-				+1.6
1,303,836	-				-1.3
1,303,838	+				-0.8
1,303,855	+				+0.5
1,303,855	+				+1.3
1,303,870	-				+0.0
1,303,874	-				-0.6
1,303,877	+				-0.4
1,303,906	+				-0.7
1,303,908	-				-0.0
1,303,909	+				-1.3
1,303,917	-		GFF1276	0.11	+0.5
1,303,917	-		GFF1276	0.11	+0.6
1,303,917	-		GFF1276	0.11	-0.6
1,303,917	-		GFF1276	0.11	-1.0
1,303,917	-		GFF1276	0.11	+0.3
1,303,917	-		GFF1276	0.11	-0.4
1,303,917	-		GFF1276	0.11	-1.0
1,303,987	+		GFF1276	0.44	-0.3
1,304,049	+		GFF1276	0.74	+0.3
1,304,049	+		GFF1276	0.74	-0.6
1,304,049	+		GFF1276	0.74	-1.5
1,304,049	+		GFF1276	0.74	+0.5
1,304,057	-		GFF1276	0.78	-0.5
1,304,057	-		GFF1276	0.78	+0.2
1,304,057	-		GFF1276	0.78	-0.9
1,304,083	+				-0.3
1,304,091	-				-1.1
1,304,106	+				-1.0
1,304,114	-				-0.9
1,304,114	-				-1.0
1,304,171	+				-2.0
1,304,173	-				+0.6
1,304,176	+				-0.7
1,304,234	+				-1.8
1,304,234	+				+1.5
1,304,239	+				+0.3
1,304,239	+				-0.5
1,304,239	+				+0.3
1,304,242	-				-1.9
1,304,242	-				+0.5
1,304,247	-				-1.1
1,304,247	-				+0.6
1,304,247	-				-1.1
1,304,269	-				-2.2
1,304,274	+				-0.8
1,304,282	-				-0.8
1,304,293	+				-1.0
1,304,303	+				+0.2
1,304,303	+				-0.3
1,304,304	+				-0.7
1,304,311	+				-1.9
1,304,311	+				-1.4
1,304,311	+				+0.5
1,304,311	+				-1.8
1,304,319	-				+1.2
1,304,319	-				-0.7
1,304,326	+				-1.1
1,304,328	-				-1.2
1,304,381	-				-1.3
1,304,381	-				-0.2
1,304,404	+				-0.9
1,304,412	-				-1.3
1,304,436	+		GFF1277	0.11	-1.8
1,304,436	+		GFF1277	0.11	-1.5
1,304,443	+		GFF1277	0.11	-1.0
1,304,443	+		GFF1277	0.11	-0.5
1,304,449	-		GFF1277	0.11	-0.3
1,304,451	-		GFF1277	0.12	+0.1
1,304,451	-		GFF1277	0.12	+0.7
1,304,463	+		GFF1277	0.12	-1.6
1,304,464	+		GFF1277	0.12	+0.2
1,304,464	+		GFF1277	0.12	-0.3
1,304,466	-		GFF1277	0.12	-0.7
1,304,537	+		GFF1277	0.16	+0.8
1,304,546	-		GFF1277	0.16	-1.1
1,304,547	+		GFF1277	0.16	+1.6
1,304,552	+		GFF1277	0.16	-1.8
1,304,553	+		GFF1277	0.16	-1.4
1,304,553	+		GFF1277	0.16	-0.9
1,304,553	+		GFF1277	0.16	+0.0
1,304,553	+		GFF1277	0.16	+0.5
1,304,553	+		GFF1277	0.16	-1.5
1,304,553	+		GFF1277	0.16	+0.8
1,304,553	+		GFF1277	0.16	-1.2
1,304,555	-		GFF1277	0.17	-0.1
1,304,555	-		GFF1277	0.17	+0.1
1,304,560	-		GFF1277	0.17	+0.9
1,304,561	-		GFF1277	0.17	-0.4
1,304,561	-		GFF1277	0.17	-0.4
1,304,561	-		GFF1277	0.17	-0.3
1,304,561	-		GFF1277	0.17	-1.0
1,304,587	+		GFF1277	0.18	-0.2
1,304,594	+		GFF1277	0.18	-1.7
1,304,594	+		GFF1277	0.18	-1.3
1,304,602	-		GFF1277	0.19	-0.3
1,304,602	-		GFF1277	0.19	-1.3
1,304,602	-		GFF1277	0.19	-0.0
1,304,602	-		GFF1277	0.19	+0.4
1,304,602	-		GFF1277	0.19	-0.4
1,304,602	-		GFF1277	0.19	+1.1
1,304,630	-		GFF1277	0.20	-1.3
1,304,677	+		GFF1277	0.22	-0.6
1,304,693	+		GFF1277	0.23	-0.9
1,304,693	+		GFF1277	0.23	-2.0
1,304,701	+		GFF1277	0.24	-1.7
1,304,701	+		GFF1277	0.24	-1.6
1,304,701	-		GFF1277	0.24	-0.5
1,304,701	-		GFF1277	0.24	-0.4
1,304,701	-		GFF1277	0.24	-0.9
1,304,701	-		GFF1277	0.24	-1.4
1,304,701	-		GFF1277	0.24	-1.1
1,304,701	-		GFF1277	0.24	-1.2
1,304,701	-		GFF1277	0.24	-0.5
1,304,701	-		GFF1277	0.24	-0.3
1,304,701	-		GFF1277	0.24	+0.7
1,304,706	+		GFF1277	0.24	-0.8
1,304,709	-		GFF1277	0.24	-1.3
1,304,709	-		GFF1277	0.24	+0.4
1,304,719	-		GFF1277	0.24	-0.4
1,304,731	+		GFF1277	0.25	+0.5
1,304,739	-		GFF1277	0.25	-0.4
1,304,751	+		GFF1277	0.26	+0.8
1,304,766	+		GFF1277	0.27	-0.9
1,304,779	-		GFF1277	0.27	+0.2
1,304,787	+		GFF1277	0.28	-0.6
1,304,787	+		GFF1277	0.28	-0.0
1,304,824	-		GFF1277	0.30	-1.6
1,304,835	+		GFF1277	0.30	-0.1
1,304,835	+		GFF1277	0.30	-0.3
1,304,835	+		GFF1277	0.30	-2.1
1,304,843	-		GFF1277	0.30	-2.0
1,304,891	+		GFF1277	0.33	+0.6
1,304,892	+		GFF1277	0.33	-1.4
1,304,893	+		GFF1277	0.33	-0.5
1,304,893	+		GFF1277	0.33	+0.1
1,304,893	+		GFF1277	0.33	-1.2
1,304,893	+		GFF1277	0.33	-0.4
1,304,894	-		GFF1277	0.33	-0.5
1,304,897	+		GFF1277	0.33	-0.3
1,304,924	+		GFF1277	0.34	+1.0
1,304,932	-		GFF1277	0.35	-1.8
1,304,958	+		GFF1277	0.36	-1.0
1,304,960	+		GFF1277	0.36	-0.3
1,304,960	+		GFF1277	0.36	+0.6
1,304,960	+		GFF1277	0.36	+0.7
1,304,960	+		GFF1277	0.36	-1.9
1,304,968	-		GFF1277	0.36	-1.3
1,304,968	-		GFF1277	0.36	-0.8
1,304,968	-		GFF1277	0.36	+0.0
1,304,968	-		GFF1277	0.36	+0.5
1,304,968	-		GFF1277	0.36	-1.0
1,304,980	+		GFF1277	0.37	-1.4
1,304,985	+		GFF1277	0.37	-0.3
1,304,999	+		GFF1277	0.38	-1.1
1,305,007	-		GFF1277	0.38	-0.5
1,305,007	-		GFF1277	0.38	-0.6
1,305,013	-		GFF1277	0.39	+0.9
1,305,013	-		GFF1277	0.39	-0.8
1,305,023	+		GFF1277	0.39	-0.6
1,305,030	+		GFF1277	0.39	-0.3
1,305,030	+		GFF1277	0.39	-0.7
1,305,031	-		GFF1277	0.39	-0.3
1,305,042	+		GFF1277	0.40	-1.0
1,305,044	+		GFF1277	0.40	-1.8
1,305,049	+		GFF1277	0.40	-0.6
1,305,052	-		GFF1277	0.41	-0.0
1,305,058	+		GFF1277	0.41	-1.4
1,305,058	+		GFF1277	0.41	-0.7
1,305,058	+		GFF1277	0.41	-0.9
1,305,058	+		GFF1277	0.41	-0.4
1,305,063	+		GFF1277	0.41	+0.0
1,305,066	+		GFF1277	0.41	-0.2
1,305,066	-		GFF1277	0.41	+0.1
1,305,066	-		GFF1277	0.41	+0.3
1,305,066	-		GFF1277	0.41	-1.0
1,305,066	-		GFF1277	0.41	+0.4
1,305,066	-		GFF1277	0.41	+0.1
1,305,071	-		GFF1277	0.41	-1.1
1,305,071	-		GFF1277	0.41	+0.1
1,305,117	-		GFF1277	0.44	-0.4
1,305,145	-		GFF1277	0.45	-0.3
1,305,154	-		GFF1277	0.45	+0.6
1,305,172	-		GFF1277	0.46	-1.0
1,305,172	-		GFF1277	0.46	+0.4
1,305,172	-		GFF1277	0.46	+0.1
1,305,230	+		GFF1277	0.49	-0.9
1,305,230	+		GFF1277	0.49	+0.0
1,305,232	+		GFF1277	0.49	-0.3
1,305,233	-		GFF1277	0.49	+0.8
1,305,233	-		GFF1277	0.49	-1.6
1,305,235	+		GFF1277	0.49	+0.3
1,305,238	-		GFF1277	0.49	-0.7
1,305,257	+		GFF1277	0.50	+0.4
1,305,265	-		GFF1277	0.51	+1.1
1,305,319	-		GFF1277	0.53	-0.7
1,305,320	+		GFF1277	0.53	-1.0
1,305,323	-		GFF1277	0.54	-0.8
1,305,328	-		GFF1277	0.54	-1.7
1,305,328	-		GFF1277	0.54	-1.3
1,305,347	+		GFF1277	0.55	-1.7
1,305,358	+		GFF1277	0.55	-1.2
1,305,358	+		GFF1277	0.55	+0.5
1,305,358	+		GFF1277	0.55	-0.7
1,305,358	+		GFF1277	0.55	-0.8
1,305,358	+		GFF1277	0.55	-0.1
1,305,358	+		GFF1277	0.55	-0.8
1,305,358	+		GFF1277	0.55	-0.5
1,305,358	+		GFF1277	0.55	-0.6
1,305,358	+		GFF1277	0.55	+0.3
1,305,366	-		GFF1277	0.56	-1.1
1,305,366	-		GFF1277	0.56	+0.6
1,305,366	-		GFF1277	0.56	+0.1
1,305,366	-		GFF1277	0.56	-1.5
1,305,421	+		GFF1277	0.58	-0.7
1,305,431	+		GFF1277	0.59	-0.7
1,305,435	+		GFF1277	0.59	-1.0
1,305,445	+		GFF1277	0.59	-1.7
1,305,445	+		GFF1277	0.59	-0.7
1,305,453	-		GFF1277	0.60	-0.5
1,305,494	+		GFF1277	0.62	-1.1
1,305,495	+		GFF1277	0.62	+0.9
1,305,502	-		GFF1277	0.62	-0.5
1,305,508	-		GFF1277	0.62	+0.6
1,305,510	+		GFF1277	0.63	-0.7
1,305,528	+		GFF1277	0.63	-0.3
1,305,536	-		GFF1277	0.64	-1.7
1,305,541	+		GFF1277	0.64	-0.8
1,305,548	+		GFF1277	0.64	-0.8
1,305,552	+		GFF1277	0.65	-1.7
1,305,565	-		GFF1277	0.65	+0.2
1,305,566	+		GFF1277	0.65	-1.6
1,305,566	+		GFF1277	0.65	-0.0
1,305,566	+		GFF1277	0.65	+0.4
1,305,572	-		GFF1277	0.66	-0.4
1,305,574	-		GFF1277	0.66	-0.0
1,305,583	+		GFF1277	0.66	-0.7
1,305,608	-		GFF1277	0.67	+0.7
1,305,612	+		GFF1277	0.67	+0.9
1,305,612	+		GFF1277	0.67	-0.9
1,305,612	+		GFF1277	0.67	+1.5
1,305,612	+		GFF1277	0.67	-1.1
1,305,620	-		GFF1277	0.68	+1.9
1,305,650	+		GFF1277	0.69	-1.8
1,305,659	+		GFF1277	0.70	-1.0
1,305,694	+		GFF1277	0.71	-0.3
1,305,699	+		GFF1277	0.72	+0.3
1,305,702	-		GFF1277	0.72	-1.3
1,305,706	+		GFF1277	0.72	-1.1
1,305,714	-		GFF1277	0.72	-0.5
1,305,719	-		GFF1277	0.73	-0.4
1,305,721	+		GFF1277	0.73	-0.6
1,305,721	+		GFF1277	0.73	+1.2
1,305,726	+		GFF1277	0.73	+1.1
1,305,726	+		GFF1277	0.73	-1.3
1,305,726	+		GFF1277	0.73	-0.6
1,305,726	+		GFF1277	0.73	-1.3
1,305,731	+		GFF1277	0.73	-0.8
1,305,731	+		GFF1277	0.73	+0.2
1,305,731	+		GFF1277	0.73	-1.4
1,305,734	-		GFF1277	0.73	-0.3
1,305,734	-		GFF1277	0.73	+0.5
1,305,734	-		GFF1277	0.73	-0.4
1,305,739	-		GFF1277	0.74	-0.5
1,305,739	-		GFF1277	0.74	-1.0
1,305,739	-		GFF1277	0.74	-0.2
1,305,739	-		GFF1277	0.74	-1.2
1,305,749	+		GFF1277	0.74	-1.2
1,305,782	+		GFF1277	0.76	+0.0
1,305,799	+		GFF1277	0.76	-0.4
1,305,800	+		GFF1277	0.77	-0.1
1,305,801	+		GFF1277	0.77	-1.0
1,305,801	+		GFF1277	0.77	-0.2
1,305,801	+		GFF1277	0.77	-0.2
1,305,803	+		GFF1277	0.77	-1.0
1,305,803	+		GFF1277	0.77	-1.2
1,305,809	-		GFF1277	0.77	+0.1
1,305,811	-		GFF1277	0.77	-0.3
1,305,846	-		GFF1277	0.79	-1.6
1,305,846	-		GFF1277	0.79	+0.2
1,305,869	+		GFF1277	0.80	-0.9
1,305,869	+		GFF1277	0.80	-1.6
1,305,874	+		GFF1277	0.80	+0.1
1,305,879	+		GFF1277	0.80	+0.3
1,305,879	+		GFF1277	0.80	-1.1
1,305,879	+		GFF1277	0.80	+0.0
1,305,879	+		GFF1277	0.80	+0.2
1,305,879	+		GFF1277	0.80	+0.0
1,305,879	+		GFF1277	0.80	-2.0
1,305,879	+		GFF1277	0.80	-0.4
1,305,887	-		GFF1277	0.81	-1.6
1,305,887	-		GFF1277	0.81	+1.3
1,305,887	-		GFF1277	0.81	+0.5
1,305,887	-		GFF1277	0.81	+0.4
1,305,887	-		GFF1277	0.81	+0.4
1,305,892	-		GFF1277	0.81	-1.8
1,305,921	+		GFF1277	0.82	+0.2
1,305,934	-		GFF1277	0.83	-0.4
1,305,944	-		GFF1277	0.83	-1.3
1,305,968	+		GFF1277	0.85	-2.2
1,306,044	+		GFF1277	0.88	+0.1
1,306,044	+		GFF1277	0.88	-1.6
1,306,052	-		GFF1277	0.89	+0.1
1,306,068	-		GFF1277	0.89	-0.6
1,306,072	+		GFF1277	0.90	-1.1
1,306,072	+		GFF1277	0.90	-0.6
1,306,072	+		GFF1277	0.90	-1.6
1,306,072	+		GFF1277	0.90	+0.3
1,306,080	-				+1.1
1,306,080	-				+0.4
1,306,082	+				-0.2
1,306,082	+				-0.3
1,306,082	+				-2.3
1,306,082	+				+1.2
1,306,082	+				+0.5
1,306,082	+				-2.4
1,306,082	+				-0.3
1,306,082	+				-0.2
1,306,090	-				-0.3
1,306,090	-				+0.4
1,306,090	-				+1.3
1,306,090	-				-0.6
1,306,090	-				-0.9
1,306,090	-				-1.2
1,306,115	-				+0.3
1,306,138	+				+0.7
1,306,138	+				+0.2
1,306,138	+				-0.4
1,306,138	+				+0.3
1,306,138	+				-0.9
1,306,138	+				-0.3
1,306,143	+				+1.4
1,306,143	+				+0.3
1,306,146	-				+0.2
1,306,146	-				+0.1
1,306,148	+				-0.5
1,306,151	-				-0.8
1,306,151	-				-1.0
1,306,160	+				-0.6
1,306,171	+				-1.5
1,306,189	-				+0.4
1,306,197	+				+0.7
1,306,197	+				-0.3
1,306,200	-				-1.1
1,306,202	+				+0.8
1,306,205	-				-2.7
1,306,210	-				-0.3
1,306,210	-				-0.1
1,306,210	-				-0.7
1,306,223	+				-1.6
1,306,245	+				-0.9
1,306,329	+				+1.1
1,306,333	-				-0.0
1,306,333	-				-0.7
1,306,335	-				-1.4
1,306,337	-				-1.6
1,306,370	+				-0.4
1,306,370	+				-1.0
1,306,371	+				+0.8
1,306,379	-				-0.5
1,306,379	-				+0.3
1,306,379	-				-1.0
1,306,379	-				+0.5
1,306,412	-				-1.7
1,306,417	+				-0.1
1,306,423	-				+1.5
1,306,440	+				-0.7
1,306,441	+				-1.3
1,306,449	-				+1.2
1,306,449	-				-1.4
1,306,449	-				-0.5
1,306,449	-				-0.3
1,306,449	-				+0.1
1,306,466	+				+0.7
1,306,519	-				-0.8
1,306,534	-				+0.1
1,306,541	+				-1.3
1,306,541	+				-1.3
1,306,541	+				-0.4
1,306,544	-				-1.1
1,306,549	-				+0.6
1,306,549	-				-1.5
1,306,558	+				-2.0
1,306,560	+				-1.6
1,306,588	-				-0.6
1,306,598	-				-0.5
1,306,626	+				-0.4
1,306,628	+				-0.8
1,306,628	-				-0.3
1,306,628	-				-0.2
1,306,634	-		GFF1278	0.10	-1.6
1,306,636	+		GFF1278	0.10	-2.4
1,306,644	-		GFF1278	0.11	-1.2
1,306,680	-		GFF1278	0.13	-1.2
1,306,709	+		GFF1278	0.15	+1.2
1,306,739	-		GFF1278	0.16	+0.1
1,306,781	+		GFF1278	0.19	-1.5
1,306,800	+		GFF1278	0.20	+0.7
1,306,805	+		GFF1278	0.20	-0.9
1,306,805	+		GFF1278	0.20	-0.4
1,306,813	-		GFF1278	0.21	-0.3
1,306,813	-		GFF1278	0.21	+0.5
1,306,830	+		GFF1278	0.22	-0.3
1,306,843	-		GFF1278	0.22	+0.0
1,306,876	+		GFF1278	0.24	-0.3
1,306,889	-		GFF1278	0.25	-0.5
1,306,911	+		GFF1278	0.26	+1.1
1,306,928	+		GFF1278	0.27	+1.4
1,306,941	-		GFF1278	0.28	-2.0
1,306,979	+		GFF1278	0.30	+0.6
1,306,979	+		GFF1278	0.30	-1.4
1,307,001	+		GFF1278	0.32	-1.0
1,307,001	+		GFF1278	0.32	-0.9
1,307,001	+		GFF1278	0.32	-1.7
1,307,001	+		GFF1278	0.32	-2.7
1,307,001	+		GFF1278	0.32	+0.6
1,307,009	-		GFF1278	0.32	-0.5
1,307,045	+		GFF1278	0.34	-1.4
1,307,050	+		GFF1278	0.34	-0.2
1,307,065	+		GFF1278	0.35	-0.7
1,307,066	+		GFF1278	0.35	-1.7
1,307,114	+		GFF1278	0.38	-2.1
1,307,115	+		GFF1278	0.38	-0.8
1,307,148	+		GFF1278	0.40	-1.4
1,307,156	-		GFF1278	0.41	-0.2
1,307,156	-		GFF1278	0.41	-0.7
1,307,221	+		GFF1278	0.44	+0.8
1,307,242	+		GFF1278	0.46	-0.4
1,307,242	+		GFF1278	0.46	-2.0
1,307,265	+		GFF1278	0.47	-0.9
1,307,265	-		GFF1278	0.47	+1.0
1,307,269	+		GFF1278	0.47	+2.0
1,307,269	+		GFF1278	0.47	+0.5
1,307,285	-		GFF1278	0.48	-0.0