Strain Fitness in Sphingobium sp. HT1-2 around GFF1145

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,148,934	-		GFF1144	0.32	-1.2
1,148,939	-		GFF1144	0.32	-0.9
1,148,946	-		GFF1144	0.33	-0.6
1,148,947	-		GFF1144	0.33	-1.2
1,148,957	-		GFF1144	0.33	+1.2
1,149,003	-		GFF1144	0.37	-0.1
1,149,005	+		GFF1144	0.37	-0.6
1,149,036	+		GFF1144	0.39	-2.1
1,149,056	+		GFF1144	0.41	-0.4
1,149,066	+		GFF1144	0.42	-0.8
1,149,071	+		GFF1144	0.42	-0.6
1,149,074	-		GFF1144	0.42	-2.3
1,149,080	+		GFF1144	0.43	+0.8
1,149,088	-		GFF1144	0.43	-0.7
1,149,107	+		GFF1144	0.45	-1.6
1,149,130	-		GFF1144	0.46	-0.3
1,149,135	-		GFF1144	0.47	-0.6
1,149,140	+		GFF1144	0.47	-0.6
1,149,148	-		GFF1144	0.48	-0.7
1,149,155	-		GFF1144	0.48	-1.2
1,149,164	+		GFF1144	0.49	-0.3
1,149,166	+		GFF1144	0.49	-0.8
1,149,172	-		GFF1144	0.50	-1.9
1,149,172	-		GFF1144	0.50	-0.6
1,149,174	+		GFF1144	0.50	+1.0
1,149,174	-		GFF1144	0.50	+1.4
1,149,193	+		GFF1144	0.51	-0.3
1,149,194	+		GFF1144	0.51	+1.0
1,149,194	+		GFF1144	0.51	-0.1
1,149,201	-		GFF1144	0.52	-0.5
1,149,202	-		GFF1144	0.52	-1.4
1,149,202	-		GFF1144	0.52	-2.1
1,149,234	+		GFF1144	0.54	+1.6
1,149,238	-		GFF1144	0.55	+1.6
1,149,250	-		GFF1144	0.55	-0.7
1,149,271	-		GFF1144	0.57	-1.2
1,149,281	-		GFF1144	0.58	-0.4
1,149,281	-		GFF1144	0.58	+0.1
1,149,292	-		GFF1144	0.59	-0.7
1,149,312	+		GFF1144	0.60	+1.1
1,149,334	-		GFF1144	0.62	-0.2
1,149,360	+		GFF1144	0.64	-2.1
1,149,381	+		GFF1144	0.65	+1.1
1,149,400	-		GFF1144	0.67	-0.0
1,149,400	-		GFF1144	0.67	-0.6
1,149,400	-		GFF1144	0.67	+0.7
1,149,400	-		GFF1144	0.67	+0.7
1,149,400	-		GFF1144	0.67	+0.7
1,149,424	+		GFF1144	0.68	-0.8
1,149,424	+		GFF1144	0.68	-1.3
1,149,437	+		GFF1144	0.69	-0.4
1,149,437	+		GFF1144	0.69	+0.1
1,149,445	-		GFF1144	0.70	-0.2
1,149,445	-		GFF1144	0.70	-1.0
1,149,447	+		GFF1144	0.70	-0.2
1,149,493	+		GFF1144	0.74	-1.6
1,149,516	+		GFF1144	0.75	+0.7
1,149,524	-		GFF1144	0.76	+0.2
1,149,539	+		GFF1144	0.77	+0.4
1,149,547	+		GFF1144	0.78	+1.0
1,149,560	-		GFF1144	0.79	-0.7
1,149,571	+		GFF1144	0.80	-0.6
1,149,583	-		GFF1144	0.80	+0.3
1,149,583	-		GFF1144	0.80	-1.0
1,149,585	+		GFF1144	0.81	-0.1
1,149,593	-		GFF1144	0.81	-1.7
1,149,593	-		GFF1144	0.81	-1.4
1,149,607	-		GFF1144	0.82	-1.2
1,149,607	-		GFF1144	0.82	-0.7
1,149,635	+		GFF1144	0.84	-1.0
1,149,635	+		GFF1144	0.84	+0.6
1,149,643	-		GFF1144	0.85	-0.9
1,149,643	-		GFF1144	0.85	-1.3
1,149,643	-		GFF1144	0.85	-0.5
1,149,645	+		GFF1144	0.85	-0.6
1,149,669	+		GFF1144	0.87	-0.2
1,149,671	+		GFF1144	0.87	-0.6
1,149,679	-		GFF1144	0.88	+0.9
1,149,684	-		GFF1144	0.88	+0.6
1,149,684	-		GFF1144	0.88	-0.2
1,149,684	-		GFF1144	0.88	+0.9
1,149,684	-		GFF1144	0.88	+0.2
1,149,693	+		GFF1144	0.89	-0.8
1,149,693	+		GFF1144	0.89	-0.4
1,149,693	+		GFF1144	0.89	+1.2
1,149,693	+		GFF1144	0.89	-1.2
1,149,701	-		GFF1144	0.89	+1.1
1,149,701	-		GFF1144	0.89	-2.4
1,149,720	-				-0.3
1,149,720	-				-0.0
1,149,720	-				+0.3
1,149,726	-				-0.5
1,149,771	-				-0.5
1,149,778	+				+1.9
1,149,789	-				-0.5
1,149,800	-				-3.2
1,149,838	+				+0.7
1,149,838	+				-1.4
1,149,840	-				-0.4
1,149,846	-				-1.4
1,149,848	+				+0.3
1,149,848	+				-0.3
1,149,853	+				+0.7
1,149,855	+				-1.1
1,149,872	+				-1.4
1,149,911	-				-2.0
1,149,920	+				+0.5
1,149,928	+				-0.3
1,149,938	-				+0.3
1,149,942	-				+0.9
1,149,948	+				-1.0
1,149,956	-				+1.4
1,149,956	-				+0.1
1,149,961	-				+0.9
1,149,972	-		GFF1145	0.11	-0.7
1,149,990	+		GFF1145	0.15	+0.2
1,149,997	+		GFF1145	0.16	-0.9
1,149,997	-		GFF1145	0.16	-1.6
1,150,002	+		GFF1145	0.17	-0.8
1,150,028	+		GFF1145	0.23	-1.6
1,150,028	+		GFF1145	0.23	-0.7
1,150,028	+		GFF1145	0.23	-0.3
1,150,028	+		GFF1145	0.23	-1.5
1,150,028	+		GFF1145	0.23	-0.2
1,150,036	-		GFF1145	0.24	-0.5
1,150,036	-		GFF1145	0.24	+1.9
1,150,036	-		GFF1145	0.24	-0.8
1,150,036	-		GFF1145	0.24	+0.8
1,150,036	-		GFF1145	0.24	-0.6
1,150,036	-		GFF1145	0.24	-0.9
1,150,036	-		GFF1145	0.24	-1.5
1,150,036	-		GFF1145	0.24	-0.7
1,150,036	-		GFF1145	0.24	-0.6
1,150,036	-		GFF1145	0.24	-0.0
1,150,036	-		GFF1145	0.24	-0.6
1,150,038	+		GFF1145	0.25	+0.8
1,150,038	+		GFF1145	0.25	-1.4
1,150,038	+		GFF1145	0.25	-0.5
1,150,038	+		GFF1145	0.25	-0.5
1,150,046	-		GFF1145	0.26	-0.7
1,150,066	-		GFF1145	0.30	-0.2
1,150,079	+		GFF1145	0.33	-1.9
1,150,083	+		GFF1145	0.34	-1.0
1,150,108	+		GFF1145	0.39	-0.0
1,150,162	-		GFF1145	0.50	-0.3
1,150,172	-		GFF1145	0.52	-0.5
1,150,177	-		GFF1145	0.53	-1.0
1,150,183	+		GFF1145	0.55	-0.2
1,150,187	-		GFF1145	0.55	-0.6
1,150,196	+		GFF1145	0.57	-2.0
1,150,228	+		GFF1145	0.64	-2.0
1,150,236	-		GFF1145	0.66	+0.4
1,150,236	-		GFF1145	0.66	-0.1
1,150,236	-		GFF1145	0.66	-2.1
1,150,238	+		GFF1145	0.66	-0.2
1,150,238	+		GFF1145	0.66	-0.9
1,150,238	+		GFF1145	0.66	-0.3
1,150,292	+		GFF1145	0.77	-0.4
1,150,300	-		GFF1145	0.79	-2.0
1,150,305	+		GFF1145	0.80	-0.6
1,150,306	+		GFF1145	0.80	-1.5
1,150,306	+		GFF1145	0.80	-0.8
1,150,313	+		GFF1145	0.82	-0.2
1,150,313	+		GFF1145	0.82	-0.3
1,150,313	+		GFF1145	0.82	+0.4
1,150,313	+		GFF1145	0.82	-0.7
1,150,321	-		GFF1145	0.83	+0.4
1,150,321	-		GFF1145	0.83	-1.2
1,150,321	-		GFF1145	0.83	-0.7
1,150,323	+		GFF1145	0.84	-0.5
1,150,327	-		GFF1145	0.84	-1.8
1,150,331	-		GFF1145	0.85	+0.8
1,150,341	-		GFF1145	0.87	-0.4
1,150,379	+				-0.0
1,150,389	-				-0.3
1,150,403	+				-0.3
1,150,437	-				-0.4
1,150,447	+				-0.2
1,150,447	+				-1.2
1,150,447	+				+0.5
1,150,455	-				-1.2
1,150,455	-				-0.3
1,150,455	-				-2.6
1,150,455	-				-1.5
1,150,455	-				-1.7
1,150,455	-				+0.5
1,150,455	-				-0.8
1,150,455	-				-0.9
1,150,460	+				-1.5
1,150,462	+				-0.4
1,150,469	-				-0.7
1,150,470	-				-1.5
1,150,471	+				+0.5
1,150,494	-				-1.7
1,150,556	+				-0.5