Strain Fitness in Sphingobium sp. HT1-2 around GFF5095

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
5,082,031	+		GFF5091	0.72	-0.5
5,082,031	+		GFF5091	0.72	-0.1
5,082,031	+		GFF5091	0.72	-1.9
5,082,031	+		GFF5091	0.72	+0.7
5,082,031	+		GFF5091	0.72	+0.5
5,082,031	+		GFF5091	0.72	-0.5
5,082,031	+		GFF5091	0.72	+0.8
5,082,031	+		GFF5091	0.72	-1.6
5,082,031	+		GFF5091	0.72	-0.9
5,082,031	+		GFF5091	0.72	-0.3
5,082,031	+		GFF5091	0.72	-0.8
5,082,031	+		GFF5091	0.72	-1.3
5,082,036	+		GFF5091	0.73	-1.0
5,082,074	-		GFF5091	0.80	+0.3
5,082,079	-		GFF5091	0.81	-0.7
5,082,079	-		GFF5091	0.81	-0.1
5,082,084	-		GFF5091	0.82	-1.3
5,082,085	-		GFF5091	0.83	-2.3
5,082,127	-				-1.4
5,082,176	+				-0.6
5,082,201	-		GFF5092	0.11	+1.2
5,082,201	-		GFF5092	0.11	-0.4
5,082,201	-		GFF5092	0.11	-1.4
5,082,212	-		GFF5092	0.18	-1.2
5,082,264	+		GFF5092	0.51	-0.7
5,082,283	+		GFF5092	0.63	-1.6
5,082,283	+		GFF5092	0.63	+0.3
5,082,284	+		GFF5092	0.64	-1.3
5,082,291	-		GFF5092	0.68	+0.6
5,082,291	-		GFF5092	0.68	+0.1
5,082,291	-		GFF5092	0.68	+0.4
5,082,295	+		GFF5092	0.70	-3.4
5,082,295	+		GFF5092	0.70	+1.2
5,082,295	+		GFF5092	0.70	-0.7
5,082,298	-		GFF5092	0.72	-0.7
5,082,300	+		GFF5092	0.74	-0.5
5,082,303	-		GFF5092	0.75	-1.4
5,082,305	+		GFF5092	0.77	-0.6
5,082,313	-		GFF5092	0.82	-0.1
5,082,320	+		GFF5092	0.86	-3.1
5,082,322	-		GFF5092	0.87	-1.1
5,082,322	-		GFF5092	0.87	-0.6
5,082,330	-				-2.4
5,082,360	-				-1.7
5,082,374	-				-0.8
5,082,376	+				-2.2
5,082,393	+		GFF5093	0.11	-0.3
5,082,394	-		GFF5093	0.12	+0.0
5,082,401	-		GFF5093	0.15	-0.7
5,082,417	+		GFF5093	0.23	-2.5
5,082,417	+		GFF5093	0.23	+1.1
5,082,417	+		GFF5093	0.23	-1.3
5,082,417	+		GFF5093	0.23	-0.3
5,082,417	+		GFF5093	0.23	+0.2
5,082,417	+		GFF5093	0.23	+0.7
5,082,417	+		GFF5093	0.23	-0.2
5,082,417	+		GFF5093	0.23	-0.9
5,082,417	+		GFF5093	0.23	-1.0
5,082,417	+		GFF5093	0.23	+0.3
5,082,417	+		GFF5093	0.23	-1.1
5,082,417	+		GFF5093	0.23	-1.0
5,082,420	-		GFF5093	0.25	-1.1
5,082,425	-		GFF5093	0.27	+1.8
5,082,425	-		GFF5093	0.27	-0.2
5,082,425	-		GFF5093	0.27	-0.7
5,082,425	-		GFF5093	0.27	-0.2
5,082,425	-		GFF5093	0.27	-2.3
5,082,425	-		GFF5093	0.27	-0.8
5,082,425	-		GFF5093	0.27	-0.6
5,082,425	-		GFF5093	0.27	-1.5
5,082,425	-		GFF5093	0.27	-1.9
5,082,425	-		GFF5093	0.27	-1.2
5,082,425	-		GFF5093	0.27	-1.1
5,082,425	-		GFF5093	0.27	-2.4
5,082,425	-		GFF5093	0.27	-2.2
5,082,425	-		GFF5093	0.27	-0.8
5,082,425	-		GFF5093	0.27	-1.6
5,082,425	-		GFF5093	0.27	-1.4
5,082,425	-		GFF5093	0.27	-0.8
5,082,425	-		GFF5093	0.27	-1.6
5,082,425	-		GFF5093	0.27	-2.7
5,082,425	-		GFF5093	0.27	+0.1
5,082,425	-		GFF5093	0.27	+0.3
5,082,425	-		GFF5093	0.27	-0.9
5,082,425	-		GFF5093	0.27	-0.9
5,082,425	-		GFF5093	0.27	-1.6
5,082,439	+		GFF5093	0.34	-1.1
5,082,457	+		GFF5093	0.43	-0.8
5,082,465	-		GFF5093	0.47	-0.6
5,082,476	+		GFF5093	0.52	-0.9
5,082,476	+		GFF5093	0.52	+1.2
5,082,476	+		GFF5093	0.52	+0.1
5,082,476	+		GFF5093	0.52	-2.2
5,082,484	-		GFF5093	0.56	+0.5
5,082,484	-		GFF5093	0.56	-2.4
5,082,484	-		GFF5093	0.56	-1.7
5,082,488	-		GFF5093	0.58	-0.5
5,082,509	-		GFF5093	0.68	-1.4
5,082,548	+		GFF5093	0.87	+0.2
5,082,548	+		GFF5093	0.87	-0.9
5,082,553	+				-0.8
5,082,568	+				+0.0
5,082,591	+				-0.1
5,082,599	-				-0.8
5,082,608	-				+1.3
5,082,616	-				-2.9
5,082,620	-				-1.9
5,082,622	+				+0.3
5,082,622	-				-0.7
5,082,645	-				-0.3
5,082,645	-				+0.7
5,082,654	-				-0.3
5,082,654	-				-1.1
5,082,654	-				-1.1
5,082,701	-		GFF5094	0.15	-1.6
5,082,701	-		GFF5094	0.15	-0.4
5,082,715	+		GFF5094	0.19	-0.7
5,082,715	+		GFF5094	0.19	+0.2
5,082,722	+		GFF5094	0.21	-1.7
5,082,722	+		GFF5094	0.21	-1.7
5,082,722	+		GFF5094	0.21	-1.1
5,082,722	+		GFF5094	0.21	+0.1
5,082,722	+		GFF5094	0.21	-1.4
5,082,722	+		GFF5094	0.21	-0.7
5,082,722	+		GFF5094	0.21	+0.2
5,082,722	+		GFF5094	0.21	+0.2
5,082,722	+		GFF5094	0.21	-1.4
5,082,722	+		GFF5094	0.21	-1.4
5,082,728	+		GFF5094	0.22	-0.3
5,082,730	-		GFF5094	0.23	+0.2
5,082,753	-		GFF5094	0.29	+0.8
5,082,771	+		GFF5094	0.34	-2.2
5,082,775	+		GFF5094	0.36	-0.2
5,082,779	-		GFF5094	0.37	-1.4
5,082,805	-		GFF5094	0.44	-0.4
5,082,812	+		GFF5094	0.46	-0.2
5,082,830	+		GFF5094	0.51	-0.8
5,082,830	+		GFF5094	0.51	-1.1
5,082,830	+		GFF5094	0.51	-3.4
5,082,830	+		GFF5094	0.51	-1.6
5,082,830	+		GFF5094	0.51	-0.9
5,082,830	+		GFF5094	0.51	-1.3
5,082,830	+		GFF5094	0.51	+0.1
5,082,830	+		GFF5094	0.51	-1.1
5,082,830	+		GFF5094	0.51	-0.6
5,082,830	+		GFF5094	0.51	-0.2
5,082,830	+		GFF5094	0.51	-0.9
5,082,830	+		GFF5094	0.51	-1.1
5,082,830	+		GFF5094	0.51	-0.9
5,082,830	+		GFF5094	0.51	-0.9
5,082,830	+		GFF5094	0.51	-1.0
5,082,830	+		GFF5094	0.51	-0.4
5,082,830	+		GFF5094	0.51	-1.5
5,082,830	+		GFF5094	0.51	-0.6
5,082,830	+		GFF5094	0.51	-1.8
5,082,830	+		GFF5094	0.51	-2.2
5,082,830	+		GFF5094	0.51	-1.7
5,082,830	+		GFF5094	0.51	-1.0
5,082,830	+		GFF5094	0.51	+0.4
5,082,830	+		GFF5094	0.51	-2.1
5,082,833	-		GFF5094	0.52	-2.3
5,082,838	-		GFF5094	0.53	-1.0
5,082,838	-		GFF5094	0.53	+0.2
5,082,838	-		GFF5094	0.53	-0.2
5,082,838	-		GFF5094	0.53	-0.9
5,082,838	-		GFF5094	0.53	-1.4
5,082,838	-		GFF5094	0.53	-0.9
5,082,838	-		GFF5094	0.53	-0.5
5,082,838	-		GFF5094	0.53	-0.5
5,082,838	-		GFF5094	0.53	-0.9
5,082,838	-		GFF5094	0.53	-0.9
5,082,838	-		GFF5094	0.53	+0.1
5,082,838	-		GFF5094	0.53	-0.2
5,082,891	+		GFF5094	0.68	+0.2
5,082,892	+		GFF5094	0.68	+0.9
5,082,897	+		GFF5094	0.70	+0.2
5,082,900	+		GFF5094	0.71	-0.6
5,082,901	+		GFF5094	0.71	-0.9
5,082,913	+		GFF5094	0.74	-1.0
5,082,920	+		GFF5094	0.76	-0.4
5,082,920	+		GFF5094	0.76	-0.6
5,082,928	-		GFF5094	0.78	-1.4
5,082,933	-		GFF5094	0.80	-1.7
5,082,954	+		GFF5094	0.86	-1.2
5,082,987	-				-0.8
5,082,997	-				-1.2
5,083,000	+				-1.8
5,083,008	+				-1.3
5,083,011	+				-1.3
5,083,016	+				-1.4
5,083,016	+				-0.3
5,083,024	-				-1.0
5,083,024	-				-1.8
5,083,053	+				-2.2
5,083,053	+				-0.4
5,083,053	+				-2.3
5,083,053	+				-0.7
5,083,061	-				-1.5
5,083,079	+		GFF5095	0.10	-2.0
5,083,079	+		GFF5095	0.10	-1.1
5,083,087	-		GFF5095	0.12	-0.6
5,083,087	-		GFF5095	0.12	-1.2
5,083,105	+		GFF5095	0.15	-1.6
5,083,105	+		GFF5095	0.15	-2.1
5,083,105	+		GFF5095	0.15	-1.6
5,083,113	-		GFF5095	0.17	-0.5
5,083,126	-		GFF5095	0.19	-0.1
5,083,132	-		GFF5095	0.20	-1.0
5,083,148	+		GFF5095	0.24	-1.2
5,083,156	-		GFF5095	0.25	-0.9
5,083,156	-		GFF5095	0.25	-1.0
5,083,161	+		GFF5095	0.26	+0.9
5,083,169	-		GFF5095	0.28	-2.4
5,083,169	-		GFF5095	0.28	-1.3
5,083,187	-		GFF5095	0.31	-0.1
5,083,194	+		GFF5095	0.33	+0.2
5,083,196	+		GFF5095	0.33	-0.5
5,083,202	-		GFF5095	0.34	+0.2
5,083,216	+		GFF5095	0.37	-1.4
5,083,218	-		GFF5095	0.37	-1.4
5,083,241	+		GFF5095	0.42	-0.4
5,083,246	+		GFF5095	0.43	-1.2
5,083,254	-		GFF5095	0.44	-0.5
5,083,254	-		GFF5095	0.44	-2.1
5,083,262	+		GFF5095	0.46	-0.5
5,083,269	-		GFF5095	0.47	+0.9
5,083,282	+		GFF5095	0.50	-1.0
5,083,289	+		GFF5095	0.51	-2.9
5,083,294	+		GFF5095	0.52	-0.9
5,083,299	+		GFF5095	0.53	-1.0
5,083,299	+		GFF5095	0.53	-1.5
5,083,302	+		GFF5095	0.54	+0.6
5,083,310	-		GFF5095	0.55	-3.3
5,083,312	+		GFF5095	0.56	-0.3
5,083,313	+		GFF5095	0.56	-0.9
5,083,350	+		GFF5095	0.63	-0.1
5,083,378	+		GFF5095	0.69	-1.5
5,083,378	+		GFF5095	0.69	-1.4
5,083,384	+		GFF5095	0.70	-1.8
5,083,391	+		GFF5095	0.71	-0.3
5,083,391	+		GFF5095	0.71	-0.3
5,083,391	+		GFF5095	0.71	-2.0
5,083,391	+		GFF5095	0.71	+0.8
5,083,391	+		GFF5095	0.71	+1.0
5,083,391	+		GFF5095	0.71	-0.6
5,083,391	+		GFF5095	0.71	+0.0
5,083,391	+		GFF5095	0.71	-1.5
5,083,391	+		GFF5095	0.71	-2.1
5,083,392	+		GFF5095	0.71	-0.6
5,083,392	+		GFF5095	0.71	-1.6
5,083,392	+		GFF5095	0.71	+0.1
5,083,392	+		GFF5095	0.71	-2.0
5,083,394	-		GFF5095	0.72	-2.9
5,083,399	-		GFF5095	0.73	-0.9
5,083,399	-		GFF5095	0.73	-1.3
5,083,399	-		GFF5095	0.73	-3.2
5,083,400	-		GFF5095	0.73	+1.0
5,083,400	-		GFF5095	0.73	-1.6
5,083,400	-		GFF5095	0.73	-1.4
5,083,400	-		GFF5095	0.73	-1.8
5,083,400	-		GFF5095	0.73	-1.5
5,083,418	+		GFF5095	0.76	-2.2
5,083,426	-		GFF5095	0.78	-1.0
5,083,495	+				-2.0
5,083,495	+				-1.9
5,083,495	+				+0.3
5,083,503	-				-2.1
5,083,503	-				-0.1
5,083,503	-				-0.0
5,083,503	-				-2.1
5,083,508	-				-1.2
5,083,527	+				-0.3
5,083,535	-				-0.8
5,083,535	-				-1.3
5,083,535	-				-0.9
5,083,535	-				+0.5
5,083,539	+				-0.6
5,083,539	+				-1.5
5,083,539	+				+0.0
5,083,545	-				-1.1
5,083,546	+				-1.7
5,083,547	+				-0.2
5,083,547	+				-1.8
5,083,547	-				-1.5
5,083,547	-				-0.1
5,083,547	-				+0.2
5,083,547	-				-3.1
5,083,552	+				-0.1
5,083,555	-				+0.0
5,083,562	+				-1.5
5,083,562	+				-1.2
5,083,565	-				-0.0
5,083,570	-				-1.5
5,083,588	-		GFF5096	0.13	-1.9
5,083,597	+		GFF5096	0.16	-0.9
5,083,598	-		GFF5096	0.16	+1.0
5,083,621	+		GFF5096	0.23	-2.5
5,083,621	+		GFF5096	0.23	-1.4
5,083,629	-		GFF5096	0.25	-0.4
5,083,638	+		GFF5096	0.28	-1.5
5,083,646	-		GFF5096	0.30	-1.3
5,083,653	+		GFF5096	0.32	-0.6
5,083,653	+		GFF5096	0.32	-0.8
5,083,658	+		GFF5096	0.33	+0.0
5,083,658	+		GFF5096	0.33	-2.0
5,083,666	+		GFF5096	0.36	+1.5
5,083,666	-		GFF5096	0.36	-1.1
5,083,668	+		GFF5096	0.36	-1.6
5,083,676	-		GFF5096	0.39	+0.7
5,083,676	-		GFF5096	0.39	-0.9
5,083,676	-		GFF5096	0.39	-2.5
5,083,685	+		GFF5096	0.41	-1.0
5,083,691	-		GFF5096	0.43	-0.4
5,083,691	-		GFF5096	0.43	+0.4
5,083,691	-		GFF5096	0.43	-1.5
5,083,691	-		GFF5096	0.43	-1.7
5,083,697	-		GFF5096	0.45	-1.2
5,083,700	+		GFF5096	0.46	-0.1
5,083,702	+		GFF5096	0.46	-0.1
5,083,702	+		GFF5096	0.46	-2.1
5,083,702	+		GFF5096	0.46	-0.6
5,083,702	+		GFF5096	0.46	-1.4
5,083,702	+		GFF5096	0.46	-0.9
5,083,710	-		GFF5096	0.48	-0.7
5,083,710	-		GFF5096	0.48	+0.5
5,083,710	-		GFF5096	0.48	+0.5
5,083,722	+		GFF5096	0.52	-0.5
5,083,749	-		GFF5096	0.60	-1.7
5,083,780	-		GFF5096	0.69	+0.1
5,083,794	+		GFF5096	0.73	-1.4
5,083,799	+		GFF5096	0.74	-1.0
5,083,802	-		GFF5096	0.75	-0.1
5,083,804	+		GFF5096	0.76	-1.0
5,083,804	+		GFF5096	0.76	-2.2
5,083,804	+		GFF5096	0.76	-2.5
5,083,804	+		GFF5096	0.76	+0.1
5,083,804	+		GFF5096	0.76	-1.2
5,083,804	+		GFF5096	0.76	-0.6
5,083,804	+		GFF5096	0.76	-1.5
5,083,807	-		GFF5096	0.77	-1.1
5,083,811	+		GFF5096	0.78	-0.1
5,083,811	+		GFF5096	0.78	-1.7
5,083,811	+		GFF5096	0.78	-1.0
5,083,811	+		GFF5096	0.78	-1.5
5,083,812	-		GFF5096	0.78	-0.2
5,083,812	-		GFF5096	0.78	-2.0
5,083,817	-		GFF5096	0.79	-1.5
5,083,817	-		GFF5096	0.79	+0.5
5,083,817	-		GFF5096	0.79	-1.2
5,083,817	-		GFF5096	0.79	-0.2
5,083,819	+		GFF5096	0.80	+0.1
5,083,819	-		GFF5096	0.80	-0.2
5,083,819	-		GFF5096	0.80	+0.8
5,083,819	-		GFF5096	0.80	-1.5
5,083,819	-		GFF5096	0.80	-0.2
5,083,819	-		GFF5096	0.80	-0.6
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