Strain Fitness in Sphingobium sp. HT1-2 around GFF5056

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
5,051,499	+				+0.8
5,051,499	+				-2.2
5,051,499	+				+0.1
5,051,530	-				-1.5
5,051,545	-				-1.3
5,051,547	+				-1.4
5,051,547	+				-1.3
5,051,547	+				-2.4
5,051,547	+				+0.0
5,051,547	+				-2.9
5,051,547	+				-1.5
5,051,547	+				+0.3
5,051,547	+				-1.4
5,051,547	+				-1.5
5,051,555	-				-1.7
5,051,555	-				-1.7
5,051,555	-				-1.7
5,051,556	-				-0.6
5,051,556	-				-0.8
5,051,556	-				-2.0
5,051,707	+				-3.3
5,051,712	+				-1.4
5,051,712	+				-1.8
5,051,712	+				-0.9
5,051,720	-				-1.7
5,051,720	-				-1.3
5,051,720	-				-1.8
5,051,730	-				-1.8
5,051,740	-				-1.0
5,051,740	-				-1.4
5,051,740	-				-1.0
5,051,788	+				-1.7
5,051,788	+				-1.3
5,051,832	+		GFF5056	0.11	-1.2
5,051,874	-		GFF5056	0.12	-1.9
5,051,915	+		GFF5056	0.14	-0.7
5,051,919	+		GFF5056	0.14	-1.2
5,051,925	+		GFF5056	0.14	-0.7
5,051,925	+		GFF5056	0.14	-2.2
5,051,934	+		GFF5056	0.15	-2.0
5,051,965	-		GFF5056	0.16	-0.7
5,051,974	+		GFF5056	0.16	+0.4
5,051,982	-		GFF5056	0.16	-0.9
5,051,982	-		GFF5056	0.16	-2.0
5,052,023	-		GFF5056	0.18	-1.6
5,052,023	-		GFF5056	0.18	-1.9
5,052,024	-		GFF5056	0.18	-1.1
5,052,024	-		GFF5056	0.18	+0.3
5,052,024	-		GFF5056	0.18	+0.0
5,052,024	-		GFF5056	0.18	-1.2
5,052,024	-		GFF5056	0.18	-1.7
5,052,024	-		GFF5056	0.18	-0.9
5,052,024	-		GFF5056	0.18	-2.2
5,052,032	-		GFF5056	0.18	-1.4
5,052,034	+		GFF5056	0.18	-1.0
5,052,034	+		GFF5056	0.18	-0.8
5,052,034	+		GFF5056	0.18	-2.5
5,052,039	+		GFF5056	0.18	-0.5
5,052,039	+		GFF5056	0.18	-1.2
5,052,099	-		GFF5056	0.21	-0.7
5,052,099	-		GFF5056	0.21	-1.8
5,052,099	-		GFF5056	0.21	-2.5
5,052,136	+		GFF5056	0.22	-1.7
5,052,140	+		GFF5056	0.22	-1.3
5,052,152	+		GFF5056	0.23	-1.7
5,052,152	+		GFF5056	0.23	-1.0
5,052,152	+		GFF5056	0.23	-0.0
5,052,152	+		GFF5056	0.23	-0.7
5,052,152	+		GFF5056	0.23	-2.3
5,052,152	+		GFF5056	0.23	-1.1
5,052,152	+		GFF5056	0.23	+0.1
5,052,152	+		GFF5056	0.23	+1.1
5,052,152	+		GFF5056	0.23	-2.5
5,052,152	+		GFF5056	0.23	-0.9
5,052,152	+		GFF5056	0.23	-3.0
5,052,152	+		GFF5056	0.23	-1.1
5,052,152	+		GFF5056	0.23	-1.2
5,052,152	+		GFF5056	0.23	-1.1
5,052,160	-		GFF5056	0.23	-2.4
5,052,160	-		GFF5056	0.23	-2.1
5,052,160	-		GFF5056	0.23	-0.6
5,052,160	-		GFF5056	0.23	-0.7
5,052,160	-		GFF5056	0.23	-1.1
5,052,160	-		GFF5056	0.23	-2.2
5,052,171	+		GFF5056	0.23	-1.0
5,052,221	-		GFF5056	0.25	-0.2
5,052,225	-		GFF5056	0.25	-0.1
5,052,230	+		GFF5056	0.26	-2.2
5,052,238	-		GFF5056	0.26	-1.0
5,052,238	-		GFF5056	0.26	-1.3
5,052,238	-		GFF5056	0.26	-2.1
5,052,240	+		GFF5056	0.26	-2.4
5,052,275	+		GFF5056	0.27	+0.8
5,052,317	+		GFF5056	0.29	-0.1
5,052,317	+		GFF5056	0.29	+0.2
5,052,317	+		GFF5056	0.29	+0.2
5,052,320	-		GFF5056	0.29	-1.2
5,052,330	+		GFF5056	0.29	-1.9
5,052,331	-		GFF5056	0.29	+0.3
5,052,341	+		GFF5056	0.30	-1.4
5,052,346	+		GFF5056	0.30	-1.6
5,052,346	+		GFF5056	0.30	-1.9
5,052,346	+		GFF5056	0.30	-1.6
5,052,359	+		GFF5056	0.30	-1.9
5,052,362	-		GFF5056	0.30	-0.4
5,052,378	+		GFF5056	0.31	-2.0
5,052,378	+		GFF5056	0.31	+1.0
5,052,378	+		GFF5056	0.31	-1.4
5,052,383	+		GFF5056	0.31	-1.9
5,052,386	-		GFF5056	0.31	-1.9
5,052,386	-		GFF5056	0.31	-2.8
5,052,391	-		GFF5056	0.31	-2.5
5,052,391	-		GFF5056	0.31	+0.8
5,052,396	+		GFF5056	0.32	+1.3
5,052,404	-		GFF5056	0.32	-1.1
5,052,405	+		GFF5056	0.32	+0.1
5,052,410	-		GFF5056	0.32	+1.3
5,052,415	+		GFF5056	0.32	-0.5
5,052,418	-		GFF5056	0.32	+0.8
5,052,420	+		GFF5056	0.33	+1.0
5,052,422	-		GFF5056	0.33	+0.0
5,052,423	-		GFF5056	0.33	-0.8
5,052,423	-		GFF5056	0.33	-0.9
5,052,456	-		GFF5056	0.34	-1.2
5,052,524	+		GFF5056	0.36	-1.4
5,052,525	+		GFF5056	0.36	-1.1
5,052,525	+		GFF5056	0.36	-1.6
5,052,525	+		GFF5056	0.36	-0.1
5,052,528	+		GFF5056	0.37	+0.2
5,052,528	+		GFF5056	0.37	-1.0
5,052,528	+		GFF5056	0.37	-1.9
5,052,528	+		GFF5056	0.37	-1.7
5,052,533	-		GFF5056	0.37	+0.4
5,052,536	-		GFF5056	0.37	-2.2
5,052,538	+		GFF5056	0.37	-1.9
5,052,548	+		GFF5056	0.37	-2.4
5,052,569	-		GFF5056	0.38	-1.2
5,052,569	-		GFF5056	0.38	-0.7
5,052,580	+		GFF5056	0.38	-0.2
5,052,580	+		GFF5056	0.38	-0.4
5,052,580	+		GFF5056	0.38	-1.5
5,052,580	+		GFF5056	0.38	-1.8
5,052,580	+		GFF5056	0.38	+0.9
5,052,580	+		GFF5056	0.38	+0.2
5,052,580	+		GFF5056	0.38	-0.5
5,052,580	+		GFF5056	0.38	-0.2
5,052,580	+		GFF5056	0.38	-1.4
5,052,580	+		GFF5056	0.38	-1.7
5,052,580	+		GFF5056	0.38	-2.3
5,052,580	+		GFF5056	0.38	-1.2
5,052,580	+		GFF5056	0.38	-0.2
5,052,580	+		GFF5056	0.38	+0.9
5,052,580	+		GFF5056	0.38	+1.5
5,052,580	+		GFF5056	0.38	-0.5
5,052,582	-		GFF5056	0.39	-2.3
5,052,582	-		GFF5056	0.39	-1.1
5,052,588	-		GFF5056	0.39	-0.7
5,052,588	-		GFF5056	0.39	-1.2
5,052,588	-		GFF5056	0.39	+0.7
5,052,588	-		GFF5056	0.39	-0.1
5,052,588	-		GFF5056	0.39	-0.8
5,052,588	-		GFF5056	0.39	-0.9
5,052,588	-		GFF5056	0.39	+0.3
5,052,588	-		GFF5056	0.39	-1.4
5,052,588	-		GFF5056	0.39	-1.0
5,052,588	-		GFF5056	0.39	-0.7
5,052,626	+		GFF5056	0.40	-1.1
5,052,629	-		GFF5056	0.40	-1.4
5,052,634	-		GFF5056	0.40	-0.8
5,052,637	+		GFF5056	0.41	-1.5
5,052,667	-		GFF5056	0.42	-0.7
5,052,669	-		GFF5056	0.42	-1.7
5,052,691	-		GFF5056	0.43	-1.7
5,052,740	-		GFF5056	0.44	-1.8
5,052,745	-		GFF5056	0.45	+0.9
5,052,752	+		GFF5056	0.45	-1.9
5,052,752	+		GFF5056	0.45	-0.9
5,052,752	+		GFF5056	0.45	+0.2
5,052,784	-		GFF5056	0.46	-0.6
5,052,784	-		GFF5056	0.46	-1.5
5,052,786	-		GFF5056	0.46	+1.2
5,052,786	-		GFF5056	0.46	+1.0
5,052,807	+		GFF5056	0.47	+0.4
5,052,807	+		GFF5056	0.47	+1.3
5,052,807	+		GFF5056	0.47	-0.7
5,052,807	+		GFF5056	0.47	-2.4
5,052,815	-		GFF5056	0.47	-0.7
5,052,815	-		GFF5056	0.47	-0.8
5,052,836	+		GFF5056	0.48	-0.8
5,052,836	+		GFF5056	0.48	-2.1
5,052,844	-		GFF5056	0.48	+0.3
5,052,851	+		GFF5056	0.49	-1.4
5,052,857	-		GFF5056	0.49	-2.0
5,052,894	+		GFF5056	0.50	-2.0
5,052,902	-		GFF5056	0.50	-0.7
5,052,909	+		GFF5056	0.51	-1.1
5,052,925	+		GFF5056	0.51	-0.5
5,052,933	-		GFF5056	0.52	-1.8
5,052,934	-		GFF5056	0.52	-0.6
5,052,946	+		GFF5056	0.52	-0.7
5,052,954	+		GFF5056	0.52	-2.4
5,052,962	-		GFF5056	0.53	-0.8
5,052,962	-		GFF5056	0.53	-2.4
5,052,962	-		GFF5056	0.53	+0.0
5,052,962	-		GFF5056	0.53	-2.7
5,052,975	-		GFF5056	0.53	-1.6
5,052,975	-		GFF5056	0.53	-2.4
5,052,977	-		GFF5056	0.53	-1.2
5,052,977	-		GFF5056	0.53	-1.1
5,052,977	-		GFF5056	0.53	+0.8
5,053,002	-		GFF5056	0.54	-1.7
5,053,023	-		GFF5056	0.55	-1.2
5,053,046	+		GFF5056	0.56	-0.7
5,053,046	+		GFF5056	0.56	-0.4
5,053,078	+		GFF5056	0.57	-1.4
5,053,108	+		GFF5056	0.58	-2.7
5,053,108	+		GFF5056	0.58	-3.3
5,053,108	+		GFF5056	0.58	-1.6
5,053,116	-		GFF5056	0.58	-2.4
5,053,116	-		GFF5056	0.58	-0.4
5,053,116	-		GFF5056	0.58	-1.2
5,053,116	-		GFF5056	0.58	-0.2
5,053,116	-		GFF5056	0.58	-2.7
5,053,116	-		GFF5056	0.58	-0.7
5,053,116	-		GFF5056	0.58	-1.1
5,053,118	+		GFF5056	0.58	-1.2
5,053,126	+		GFF5056	0.59	-0.2
5,053,126	+		GFF5056	0.59	+0.3
5,053,126	+		GFF5056	0.59	-2.6
5,053,126	+		GFF5056	0.59	-1.9
5,053,126	+		GFF5056	0.59	-0.7
5,053,127	+		GFF5056	0.59	-1.2
5,053,133	-		GFF5056	0.59	-0.9
5,053,134	-		GFF5056	0.59	-0.8
5,053,134	-		GFF5056	0.59	-1.1
5,053,134	-		GFF5056	0.59	-1.7
5,053,134	-		GFF5056	0.59	-2.0
5,053,134	-		GFF5056	0.59	-2.9
5,053,134	-		GFF5056	0.59	+0.4
5,053,144	+		GFF5056	0.59	-3.5
5,053,144	+		GFF5056	0.59	-1.9
5,053,144	-		GFF5056	0.59	-1.7
5,053,152	-		GFF5056	0.60	-2.9
5,053,152	-		GFF5056	0.60	-3.8
5,053,152	-		GFF5056	0.60	-0.9
5,053,152	-		GFF5056	0.60	-1.7
5,053,152	-		GFF5056	0.60	-1.3
5,053,158	+		GFF5056	0.60	+0.0
5,053,158	+		GFF5056	0.60	-2.2
5,053,158	+		GFF5056	0.60	-0.2
5,053,158	+		GFF5056	0.60	+1.5
5,053,166	-		GFF5056	0.60	-1.2
5,053,168	+		GFF5056	0.60	-0.5
5,053,176	-		GFF5056	0.61	-1.1
5,053,176	-		GFF5056	0.61	-2.3
5,053,190	-		GFF5056	0.61	-0.3
5,053,195	-		GFF5056	0.61	+0.9
5,053,211	+		GFF5056	0.62	-1.9
5,053,240	+		GFF5056	0.63	-2.3
5,053,241	-		GFF5056	0.63	+0.3
5,053,241	-		GFF5056	0.63	-1.7
5,053,256	+		GFF5056	0.63	-1.4
5,053,257	+		GFF5056	0.64	-0.7
5,053,262	+		GFF5056	0.64	-2.4
5,053,264	-		GFF5056	0.64	-0.8
5,053,270	-		GFF5056	0.64	-1.1
5,053,270	-		GFF5056	0.64	-0.8
5,053,271	-		GFF5056	0.64	-1.1
5,053,273	+		GFF5056	0.64	-2.7
5,053,273	+		GFF5056	0.64	-0.1
5,053,307	+		GFF5056	0.65	-0.2
5,053,320	-		GFF5056	0.66	-0.3
5,053,355	+		GFF5056	0.67	+0.3
5,053,371	+		GFF5056	0.68	-2.5
5,053,378	+		GFF5056	0.68	-1.0
5,053,378	+		GFF5056	0.68	-1.4
5,053,385	-		GFF5056	0.68	-0.8
5,053,418	-		GFF5056	0.69	-1.8
5,053,418	-		GFF5056	0.69	+0.1
5,053,420	-		GFF5056	0.70	-1.3
5,053,420	-		GFF5056	0.70	+0.8
5,053,420	-		GFF5056	0.70	-0.8
5,053,431	+		GFF5056	0.70	-1.7
5,053,431	+		GFF5056	0.70	+1.7
5,053,431	+		GFF5056	0.70	-2.5
5,053,431	+		GFF5056	0.70	-1.7
5,053,431	+		GFF5056	0.70	-0.9
5,053,431	+		GFF5056	0.70	-0.9
5,053,431	+		GFF5056	0.70	-2.0
5,053,431	+		GFF5056	0.70	-1.7
5,053,441	+		GFF5056	0.70	-2.0
5,053,484	-		GFF5056	0.72	-1.8
5,053,494	-		GFF5056	0.72	+0.2
5,053,499	+		GFF5056	0.72	-2.5
5,053,517	-		GFF5056	0.73	-1.5
5,053,517	-		GFF5056	0.73	+0.1
5,053,517	-		GFF5056	0.73	-0.3
5,053,517	-		GFF5056	0.73	-0.7
5,053,517	-		GFF5056	0.73	-1.1
5,053,525	-		GFF5056	0.73	+0.8
5,053,528	+		GFF5056	0.74	-0.7
5,053,528	+		GFF5056	0.74	-1.6
5,053,532	+		GFF5056	0.74	-2.3
5,053,581	+		GFF5056	0.76	-1.1
5,053,589	+		GFF5056	0.76	+1.3
5,053,591	+		GFF5056	0.76	+1.0
5,053,602	+		GFF5056	0.76	-0.3
5,053,624	+		GFF5056	0.77	-1.0
5,053,624	+		GFF5056	0.77	-0.5
5,053,632	+		GFF5056	0.77	-0.9
5,053,632	-		GFF5056	0.77	+0.5
5,053,634	+		GFF5056	0.77	-1.5
5,053,640	-		GFF5056	0.78	-2.1
5,053,650	-		GFF5056	0.78	-1.3
5,053,661	-		GFF5056	0.78	+0.4
5,053,663	+		GFF5056	0.79	-0.1
5,053,683	+		GFF5056	0.79	-0.7
5,053,706	+		GFF5056	0.80	+0.6
5,053,755	+		GFF5056	0.82	+0.3
5,053,763	+		GFF5056	0.82	-1.7
5,053,763	+		GFF5056	0.82	-0.9
5,053,763	+		GFF5056	0.82	-1.2
5,053,763	+		GFF5056	0.82	-0.9
5,053,763	+		GFF5056	0.82	+1.4
5,053,763	+		GFF5056	0.82	+1.3
5,053,765	+		GFF5056	0.82	-0.1
5,053,770	+		GFF5056	0.83	-2.5
5,053,771	-		GFF5056	0.83	-2.5
5,053,771	-		GFF5056	0.83	-1.4
5,053,771	-		GFF5056	0.83	-1.4
5,053,771	-		GFF5056	0.83	-0.1
5,053,771	-		GFF5056	0.83	-1.7
5,053,771	-		GFF5056	0.83	-1.4
5,053,773	-		GFF5056	0.83	-0.3
5,053,775	+		GFF5056	0.83	-0.5
5,053,803	+		GFF5056	0.84	-0.2
5,053,803	+		GFF5056	0.84	+0.4
5,053,808	+		GFF5056	0.84	+0.1
5,053,808	+		GFF5056	0.84	-1.4
5,053,808	+		GFF5056	0.84	-2.1
5,053,808	+		GFF5056	0.84	-0.7
5,053,809	+		GFF5056	0.84	-1.1
5,053,811	-		GFF5056	0.84	-0.2
5,053,811	-		GFF5056	0.84	-2.9
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5,054,694	-				+1.8
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