Strain Fitness in Sphingobium sp. HT1-2 around GFF4243

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,261,502	+		GFF4242	0.53	+0.8
4,261,502	+		GFF4242	0.53	-0.7
4,261,502	+		GFF4242	0.53	+0.4
4,261,503	+		GFF4242	0.53	-1.0
4,261,503	+		GFF4242	0.53	+0.7
4,261,509	-		GFF4242	0.53	+0.2
4,261,510	-		GFF4242	0.53	-0.2
4,261,510	-		GFF4242	0.53	+0.2
4,261,553	-		GFF4242	0.55	+1.0
4,261,573	-		GFF4242	0.56	+0.2
4,261,575	-		GFF4242	0.57	-1.8
4,261,577	+		GFF4242	0.57	-0.2
4,261,596	+		GFF4242	0.58	-1.7
4,261,596	+		GFF4242	0.58	+0.4
4,261,604	-		GFF4242	0.58	-0.9
4,261,604	-		GFF4242	0.58	-0.1
4,261,611	-		GFF4242	0.58	-1.3
4,261,632	-		GFF4242	0.59	-0.5
4,261,632	-		GFF4242	0.59	+0.2
4,261,635	-		GFF4242	0.59	+1.1
4,261,638	+		GFF4242	0.60	-1.3
4,261,638	+		GFF4242	0.60	+1.0
4,261,640	+		GFF4242	0.60	-0.3
4,261,640	+		GFF4242	0.60	-0.5
4,261,640	+		GFF4242	0.60	-0.6
4,261,646	-		GFF4242	0.60	-0.7
4,261,654	+		GFF4242	0.60	-0.2
4,261,656	-		GFF4242	0.60	-1.6
4,261,692	+		GFF4242	0.62	-0.6
4,261,700	+		GFF4242	0.62	+0.0
4,261,705	-		GFF4242	0.63	+0.2
4,261,708	-		GFF4242	0.63	+1.2
4,261,717	+		GFF4242	0.63	-1.2
4,261,731	+		GFF4242	0.64	-0.7
4,261,732	-		GFF4242	0.64	+0.0
4,261,750	-		GFF4242	0.65	-0.2
4,261,759	+		GFF4242	0.65	+0.1
4,261,767	-		GFF4242	0.66	-1.4
4,261,780	+		GFF4242	0.66	+1.4
4,261,785	+		GFF4242	0.66	-0.6
4,261,786	+		GFF4242	0.67	-0.0
4,261,794	-		GFF4242	0.67	-0.1
4,261,796	-		GFF4242	0.67	+1.3
4,261,796	-		GFF4242	0.67	+1.3
4,261,798	-		GFF4242	0.67	-1.8
4,261,816	-		GFF4242	0.68	+0.7
4,261,818	+		GFF4242	0.68	-0.6
4,261,818	+		GFF4242	0.68	-1.6
4,261,843	+		GFF4242	0.69	-0.4
4,261,860	+		GFF4242	0.70	-0.8
4,261,865	+		GFF4242	0.70	+0.8
4,261,865	+		GFF4242	0.70	-0.6
4,261,868	-		GFF4242	0.70	+1.2
4,261,868	-		GFF4242	0.70	-1.2
4,261,873	-		GFF4242	0.71	-0.0
4,261,875	-		GFF4242	0.71	+0.8
4,261,880	-		GFF4242	0.71	-0.7
4,261,882	+		GFF4242	0.71	-0.5
4,261,882	+		GFF4242	0.71	-1.3
4,261,885	-		GFF4242	0.71	-1.0
4,261,935	+		GFF4242	0.74	-1.0
4,261,935	+		GFF4242	0.74	-0.8
4,261,935	+		GFF4242	0.74	-0.8
4,261,943	-		GFF4242	0.74	-1.0
4,261,943	-		GFF4242	0.74	+0.9
4,261,943	-		GFF4242	0.74	+0.2
4,261,943	-		GFF4242	0.74	-0.9
4,261,943	-		GFF4242	0.74	-0.9
4,261,950	+		GFF4242	0.74	+0.4
4,261,954	+		GFF4242	0.74	-0.7
4,261,959	+		GFF4242	0.75	+0.4
4,261,965	+		GFF4242	0.75	-1.3
4,261,973	-		GFF4242	0.75	-0.1
4,262,003	+		GFF4242	0.77	+0.7
4,262,010	+		GFF4242	0.77	-0.4
4,262,010	+		GFF4242	0.77	-0.5
4,262,010	+		GFF4242	0.77	-1.7
4,262,010	+		GFF4242	0.77	+0.7
4,262,010	+		GFF4242	0.77	+0.3
4,262,010	+		GFF4242	0.77	-2.0
4,262,010	+		GFF4242	0.77	-0.7
4,262,010	+		GFF4242	0.77	+0.6
4,262,010	+		GFF4242	0.77	-1.0
4,262,010	+		GFF4242	0.77	-0.9
4,262,010	+		GFF4242	0.77	-1.8
4,262,010	+		GFF4242	0.77	-1.0
4,262,010	+		GFF4242	0.77	-0.5
4,262,010	+		GFF4242	0.77	+1.1
4,262,010	+		GFF4242	0.77	+0.4
4,262,010	+		GFF4242	0.77	-0.8
4,262,010	+		GFF4242	0.77	+0.6
4,262,010	+		GFF4242	0.77	+0.2
4,262,010	+		GFF4242	0.77	-1.2
4,262,018	-		GFF4242	0.78	-0.4
4,262,018	-		GFF4242	0.78	-0.7
4,262,018	-		GFF4242	0.78	-0.6
4,262,018	-		GFF4242	0.78	-0.4
4,262,018	-		GFF4242	0.78	+0.3
4,262,018	-		GFF4242	0.78	-1.7
4,262,018	-		GFF4242	0.78	+0.1
4,262,018	-		GFF4242	0.78	-0.1
4,262,018	-		GFF4242	0.78	-2.5
4,262,018	-		GFF4242	0.78	+0.7
4,262,018	-		GFF4242	0.78	-2.0
4,262,018	-		GFF4242	0.78	+0.6
4,262,018	-		GFF4242	0.78	-1.5
4,262,021	-		GFF4242	0.78	-1.3
4,262,029	+		GFF4242	0.78	-1.4
4,262,034	+		GFF4242	0.78	-0.1
4,262,037	+		GFF4242	0.78	-0.0
4,262,042	-		GFF4242	0.79	+0.3
4,262,078	-		GFF4242	0.80	+0.2
4,262,080	-		GFF4242	0.80	+0.1
4,262,095	+		GFF4242	0.81	-0.7
4,262,100	+		GFF4242	0.81	-1.0
4,262,100	+		GFF4242	0.81	-1.5
4,262,100	+		GFF4242	0.81	+0.2
4,262,100	+		GFF4242	0.81	-0.4
4,262,100	+		GFF4242	0.81	-1.3
4,262,100	+		GFF4242	0.81	-2.6
4,262,100	+		GFF4242	0.81	+0.7
4,262,100	+		GFF4242	0.81	+0.1
4,262,100	+		GFF4242	0.81	+0.3
4,262,100	+		GFF4242	0.81	-0.7
4,262,100	+		GFF4242	0.81	-0.7
4,262,100	+		GFF4242	0.81	+0.0
4,262,100	+		GFF4242	0.81	-1.2
4,262,100	+		GFF4242	0.81	+0.4
4,262,103	-		GFF4242	0.82	+0.9
4,262,108	-		GFF4242	0.82	-1.8
4,262,108	-		GFF4242	0.82	-1.1
4,262,108	-		GFF4242	0.82	-0.9
4,262,108	-		GFF4242	0.82	+0.8
4,262,108	-		GFF4242	0.82	-0.8
4,262,108	-		GFF4242	0.82	-0.5
4,262,108	-		GFF4242	0.82	-0.1
4,262,125	+		GFF4242	0.83	+0.0
4,262,133	-		GFF4242	0.83	+1.3
4,262,133	-		GFF4242	0.83	+0.1
4,262,172	+		GFF4242	0.85	+1.0
4,262,172	+		GFF4242	0.85	-0.8
4,262,196	+		GFF4242	0.86	+0.0
4,262,204	-		GFF4242	0.86	+0.8
4,262,258	-		GFF4242	0.89	+0.6
4,262,267	-		GFF4242	0.89	-2.2
4,262,276	+		GFF4242	0.90	+1.1
4,262,284	+				-1.0
4,262,297	+				+0.0
4,262,310	-				-0.8
4,262,318	+				-0.6
4,262,318	-				-1.6
4,262,320	-				-1.1
4,262,326	-				-0.4
4,262,326	-				+0.2
4,262,330	-				+0.3
4,262,331	+				-0.4
4,262,337	-				+0.9
4,262,372	-				-0.7
4,262,373	+				-0.2
4,262,373	+				+0.0
4,262,381	-				-1.0
4,262,383	+				-0.8
4,262,385	+				-1.5
4,262,385	+				-0.1
4,262,398	+				+0.1
4,262,398	+				-0.6
4,262,398	+				+0.1
4,262,398	+				+1.1
4,262,406	-				+0.2
4,262,406	-				-0.3
4,262,406	-				-0.7
4,262,406	-				-1.3
4,262,406	-				-1.2
4,262,411	+				-0.4
4,262,413	+				+0.5
4,262,413	+				-0.0
4,262,416	-				+0.4
4,262,432	+				-0.2
4,262,440	-				-0.3
4,262,474	+				-1.5
4,262,484	-				-0.4
4,262,492	+				+0.4
4,262,492	+				-0.1
4,262,499	-				-2.0
4,262,500	-				-1.7
4,262,552	+				+0.7
4,262,552	+				-0.9
4,262,552	+				-1.0
4,262,552	+				-0.1
4,262,552	+				+0.7
4,262,559	-				+0.4
4,262,560	-				-0.8
4,262,619	-				-0.7
4,262,621	+				+0.7
4,262,624	+				+0.6
4,262,629	-				-1.6
4,262,629	-				+0.4
4,262,629	-				-0.3
4,262,646	-				-0.4
4,262,650	+				-0.7
4,262,673	-		GFF4243	0.11	-0.9
4,262,681	+		GFF4243	0.11	-1.2
4,262,690	+		GFF4243	0.12	-1.0
4,262,724	-		GFF4243	0.14	-1.5
4,262,782	+		GFF4243	0.17	-1.2
4,262,784	+		GFF4243	0.17	+0.6
4,262,784	+		GFF4243	0.17	-0.6
4,262,784	+		GFF4243	0.17	-0.0
4,262,790	-		GFF4243	0.18	-2.2
4,262,801	-		GFF4243	0.18	-1.3
4,262,813	-		GFF4243	0.19	-0.3
4,262,840	+		GFF4243	0.21	+0.3
4,262,847	-		GFF4243	0.21	-0.3
4,262,848	-		GFF4243	0.21	-1.2
4,262,851	+		GFF4243	0.21	+1.3
4,262,857	+		GFF4243	0.22	+0.2
4,262,893	-		GFF4243	0.24	-0.1
4,262,903	-		GFF4243	0.25	+0.2
4,262,920	+		GFF4243	0.26	+0.6
4,262,924	+		GFF4243	0.26	+1.0
4,262,930	+		GFF4243	0.26	-1.3
4,262,930	-		GFF4243	0.26	+0.2
4,262,934	+		GFF4243	0.26	-1.5
4,262,938	-		GFF4243	0.27	+0.3
4,262,956	+		GFF4243	0.28	-1.2
4,262,956	+		GFF4243	0.28	-0.4
4,262,964	-		GFF4243	0.28	+0.3
4,262,964	-		GFF4243	0.28	+0.8
4,262,964	-		GFF4243	0.28	-0.3
4,262,979	+		GFF4243	0.29	-0.7
4,262,992	+		GFF4243	0.30	-1.3
4,262,992	+		GFF4243	0.30	-0.3
4,262,992	+		GFF4243	0.30	+0.2
4,262,992	-		GFF4243	0.30	-2.0
4,263,000	-		GFF4243	0.30	+0.2
4,263,010	+		GFF4243	0.31	-0.4
4,263,023	+		GFF4243	0.32	-0.9
4,263,023	+		GFF4243	0.32	-0.2
4,263,023	+		GFF4243	0.32	-1.0
4,263,023	+		GFF4243	0.32	-1.6
4,263,023	+		GFF4243	0.32	-1.1
4,263,023	+		GFF4243	0.32	+1.0
4,263,023	+		GFF4243	0.32	-0.1
4,263,023	+		GFF4243	0.32	-1.5
4,263,031	-		GFF4243	0.32	+0.4
4,263,031	-		GFF4243	0.32	-0.3
4,263,031	-		GFF4243	0.32	-1.3
4,263,031	-		GFF4243	0.32	+0.5
4,263,036	-		GFF4243	0.33	-2.3
4,263,044	+		GFF4243	0.33	+1.0
4,263,044	+		GFF4243	0.33	-1.4
4,263,044	+		GFF4243	0.33	-0.7
4,263,052	-		GFF4243	0.34	-1.9
4,263,052	-		GFF4243	0.34	-0.3
4,263,073	+		GFF4243	0.35	+0.3
4,263,078	+		GFF4243	0.35	-2.1
4,263,078	+		GFF4243	0.35	-0.3
4,263,086	-		GFF4243	0.36	+0.2
4,263,086	-		GFF4243	0.36	-0.0
4,263,086	-		GFF4243	0.36	-1.5
4,263,086	-		GFF4243	0.36	-1.1
4,263,086	-		GFF4243	0.36	-0.6
4,263,091	-		GFF4243	0.36	-1.1
4,263,091	-		GFF4243	0.36	-1.7
4,263,115	+		GFF4243	0.37	-3.1
4,263,171	+		GFF4243	0.41	-0.9
4,263,171	+		GFF4243	0.41	-0.1
4,263,171	+		GFF4243	0.41	-0.8
4,263,171	+		GFF4243	0.41	-2.0
4,263,171	+		GFF4243	0.41	-1.2
4,263,171	+		GFF4243	0.41	-1.5
4,263,179	-		GFF4243	0.41	-1.2
4,263,179	-		GFF4243	0.41	+0.3
4,263,179	-		GFF4243	0.41	-0.1
4,263,179	-		GFF4243	0.41	+0.3
4,263,179	-		GFF4243	0.41	-1.7
4,263,179	-		GFF4243	0.41	-0.9
4,263,199	-		GFF4243	0.42	-1.0
4,263,213	+		GFF4243	0.43	+0.2
4,263,229	+		GFF4243	0.44	-0.7
4,263,249	-		GFF4243	0.45	-1.3
4,263,252	+		GFF4243	0.46	-1.3
4,263,255	-		GFF4243	0.46	-2.8
4,263,262	+		GFF4243	0.46	-0.6
4,263,266	-		GFF4243	0.46	+0.1
4,263,270	-		GFF4243	0.47	-1.3
4,263,270	-		GFF4243	0.47	-1.2
4,263,271	-		GFF4243	0.47	+0.3
4,263,293	+		GFF4243	0.48	-0.9
4,263,301	+		GFF4243	0.48	-0.7
4,263,311	+		GFF4243	0.49	-0.9
4,263,311	+		GFF4243	0.49	-1.0
4,263,311	+		GFF4243	0.49	+0.4
4,263,319	-		GFF4243	0.50	-1.1
4,263,319	-		GFF4243	0.50	-1.2
4,263,319	-		GFF4243	0.50	-0.6
4,263,319	-		GFF4243	0.50	-1.7
4,263,319	-		GFF4243	0.50	+1.1
4,263,324	-		GFF4243	0.50	-1.6
4,263,334	+		GFF4243	0.50	+0.7
4,263,349	-		GFF4243	0.51	-0.9
4,263,383	+		GFF4243	0.53	+0.7
4,263,391	-		GFF4243	0.54	-1.8
4,263,391	-		GFF4243	0.54	-1.6
4,263,391	-		GFF4243	0.54	-1.0
4,263,407	+		GFF4243	0.55	-1.4
4,263,407	+		GFF4243	0.55	+0.8
4,263,407	+		GFF4243	0.55	+1.1
4,263,414	-		GFF4243	0.55	-0.8
4,263,422	-		GFF4243	0.56	-0.5
4,263,431	-		GFF4243	0.56	-1.3
4,263,439	-		GFF4243	0.57	-0.8
4,263,441	-		GFF4243	0.57	-0.2
4,263,441	-		GFF4243	0.57	-1.0
4,263,441	-		GFF4243	0.57	-0.0
4,263,441	-		GFF4243	0.57	-0.2
4,263,453	+		GFF4243	0.58	-1.2
4,263,453	+		GFF4243	0.58	-1.0
4,263,459	-		GFF4243	0.58	+0.8
4,263,461	-		GFF4243	0.58	+1.4
4,263,484	-		GFF4243	0.59	-0.2
4,263,485	+		GFF4243	0.60	+0.0
4,263,540	-		GFF4243	0.63	+0.4
4,263,546	+		GFF4243	0.63	-1.2
4,263,548	+		GFF4243	0.63	+0.6
4,263,554	-		GFF4243	0.64	-0.5
4,263,555	-		GFF4243	0.64	+0.7
4,263,555	-		GFF4243	0.64	-0.6
4,263,577	+		GFF4243	0.65	+0.3
4,263,594	+		GFF4243	0.66	-1.2
4,263,611	-		GFF4243	0.67	-1.1
4,263,641	+		GFF4243	0.69	-0.7
4,263,654	-		GFF4243	0.70	+0.7
4,263,675	-		GFF4243	0.71	-0.5
4,263,678	-		GFF4243	0.71	-1.1
4,263,680	-		GFF4243	0.71	+0.5
4,263,680	-		GFF4243	0.71	-1.2
4,263,692	+		GFF4243	0.72	-0.4
4,263,692	+		GFF4243	0.72	-0.6
4,263,692	+		GFF4243	0.72	-1.3
4,263,692	+		GFF4243	0.72	-2.0
4,263,692	+		GFF4243	0.72	-1.4
4,263,700	-		GFF4243	0.72	+1.3
4,263,700	-		GFF4243	0.72	-0.5
4,263,700	-		GFF4243	0.72	-1.5
4,263,700	-		GFF4243	0.72	-0.9
4,263,700	-		GFF4243	0.72	-0.2
4,263,700	-		GFF4243	0.72	-2.1
4,263,700	-		GFF4243	0.72	-0.1
4,263,735	+		GFF4243	0.75	+0.1
4,263,737	+		GFF4243	0.75	-0.9
4,263,743	-		GFF4243	0.75	-2.1
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