Strain Fitness in Sphingobium sp. HT1-2 around GFF4003

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,032,582	+		GFF4002	0.39	-0.2
4,032,588	-		GFF4002	0.40	-1.9
4,032,610	+		GFF4002	0.41	-1.8
4,032,672	+		GFF4002	0.45	-0.0
4,032,672	+		GFF4002	0.45	+0.1
4,032,672	+		GFF4002	0.45	-0.9
4,032,672	+		GFF4002	0.45	+0.1
4,032,672	+		GFF4002	0.45	-1.3
4,032,679	+		GFF4002	0.45	-0.9
4,032,679	+		GFF4002	0.45	-0.3
4,032,680	-		GFF4002	0.45	-1.4
4,032,680	-		GFF4002	0.45	+0.4
4,032,680	-		GFF4002	0.45	-0.2
4,032,687	-		GFF4002	0.46	-0.2
4,032,687	-		GFF4002	0.46	+0.5
4,032,687	-		GFF4002	0.46	-0.7
4,032,713	+		GFF4002	0.47	-1.8
4,032,713	+		GFF4002	0.47	-0.8
4,032,713	+		GFF4002	0.47	-1.0
4,032,721	-		GFF4002	0.48	-0.6
4,032,721	-		GFF4002	0.48	+1.3
4,032,726	-		GFF4002	0.48	-1.0
4,032,726	-		GFF4002	0.48	-1.2
4,032,728	+		GFF4002	0.48	-0.0
4,032,738	+		GFF4002	0.49	-0.4
4,032,745	+		GFF4002	0.49	-0.7
4,032,745	-		GFF4002	0.49	-0.9
4,032,746	-		GFF4002	0.49	-1.2
4,032,764	+		GFF4002	0.50	+0.4
4,032,772	-		GFF4002	0.51	-0.2
4,032,789	-		GFF4002	0.52	-1.1
4,032,789	-		GFF4002	0.52	-0.9
4,032,791	-		GFF4002	0.52	+0.3
4,032,791	-		GFF4002	0.52	-0.5
4,032,791	-		GFF4002	0.52	+0.2
4,032,792	-		GFF4002	0.52	-0.7
4,032,810	+		GFF4002	0.53	-0.6
4,032,833	-		GFF4002	0.55	+1.0
4,032,861	+		GFF4002	0.56	+0.5
4,032,874	-		GFF4002	0.57	-0.2
4,032,883	+		GFF4002	0.58	-1.2
4,032,908	+		GFF4002	0.59	-1.4
4,032,908	+		GFF4002	0.59	-0.7
4,032,908	+		GFF4002	0.59	-0.9
4,032,908	+		GFF4002	0.59	+0.6
4,032,916	-		GFF4002	0.60	+0.2
4,032,916	-		GFF4002	0.60	-0.8
4,032,916	-		GFF4002	0.60	+0.4
4,032,916	-		GFF4002	0.60	+0.5
4,032,916	-		GFF4002	0.60	+0.5
4,032,926	-		GFF4002	0.60	-1.9
4,032,930	+		GFF4002	0.60	+0.2
4,032,940	-		GFF4002	0.61	+0.9
4,032,953	+		GFF4002	0.62	-1.0
4,032,968	+		GFF4002	0.63	-0.2
4,032,973	+		GFF4002	0.63	-1.4
4,032,973	+		GFF4002	0.63	+0.2
4,032,981	-		GFF4002	0.64	-2.5
4,032,981	-		GFF4002	0.64	+1.0
4,032,990	+		GFF4002	0.64	+0.5
4,032,999	+		GFF4002	0.65	-1.8
4,033,004	+		GFF4002	0.65	-0.9
4,033,013	-		GFF4002	0.65	-1.4
4,033,032	+		GFF4002	0.67	+0.3
4,033,032	+		GFF4002	0.67	-1.5
4,033,032	+		GFF4002	0.67	-0.9
4,033,032	+		GFF4002	0.67	-0.5
4,033,032	+		GFF4002	0.67	-0.9
4,033,032	+		GFF4002	0.67	-1.3
4,033,032	+		GFF4002	0.67	+0.2
4,033,032	+		GFF4002	0.67	-2.4
4,033,037	-		GFF4002	0.67	-1.2
4,033,040	-		GFF4002	0.67	+0.8
4,033,040	-		GFF4002	0.67	-0.2
4,033,040	-		GFF4002	0.67	-0.9
4,033,040	-		GFF4002	0.67	+0.9
4,033,040	-		GFF4002	0.67	+0.0
4,033,040	-		GFF4002	0.67	-1.4
4,033,040	-		GFF4002	0.67	-0.5
4,033,040	-		GFF4002	0.67	-1.1
4,033,040	-		GFF4002	0.67	-1.5
4,033,040	-		GFF4002	0.67	+0.9
4,033,040	-		GFF4002	0.67	+1.1
4,033,047	+		GFF4002	0.68	-1.1
4,033,055	-		GFF4002	0.68	+0.6
4,033,055	-		GFF4002	0.68	+0.1
4,033,060	+		GFF4002	0.68	+0.1
4,033,063	-		GFF4002	0.68	+0.5
4,033,063	-		GFF4002	0.68	-0.4
4,033,063	-		GFF4002	0.68	-0.0
4,033,063	-		GFF4002	0.68	-0.5
4,033,071	+		GFF4002	0.69	-0.8
4,033,071	+		GFF4002	0.69	-1.6
4,033,120	-		GFF4002	0.72	+0.2
4,033,141	-		GFF4002	0.73	-1.6
4,033,155	-		GFF4002	0.74	-0.5
4,033,155	-		GFF4002	0.74	-0.6
4,033,159	+		GFF4002	0.74	-0.4
4,033,166	+		GFF4002	0.75	-1.6
4,033,174	-		GFF4002	0.75	+0.2
4,033,174	-		GFF4002	0.75	+1.4
4,033,174	-		GFF4002	0.75	-0.4
4,033,183	+		GFF4002	0.76	+0.3
4,033,191	-		GFF4002	0.76	+0.6
4,033,202	+		GFF4002	0.77	-1.8
4,033,204	+		GFF4002	0.77	-1.2
4,033,209	+		GFF4002	0.77	-1.1
4,033,209	+		GFF4002	0.77	+0.3
4,033,209	+		GFF4002	0.77	-1.3
4,033,209	+		GFF4002	0.77	-0.5
4,033,216	+		GFF4002	0.78	-0.6
4,033,224	-		GFF4002	0.78	-0.4
4,033,255	-		GFF4002	0.80	-0.2
4,033,266	-		GFF4002	0.81	-0.5
4,033,271	+		GFF4002	0.81	+0.1
4,033,271	+		GFF4002	0.81	-0.6
4,033,271	+		GFF4002	0.81	+1.8
4,033,277	-		GFF4002	0.81	+0.9
4,033,279	+		GFF4002	0.82	-0.6
4,033,279	-		GFF4002	0.82	-0.7
4,033,279	-		GFF4002	0.82	+0.9
4,033,279	-		GFF4002	0.82	-0.2
4,033,279	-		GFF4002	0.82	-0.2
4,033,279	-		GFF4002	0.82	-1.7
4,033,279	-		GFF4002	0.82	-0.3
4,033,279	-		GFF4002	0.82	-1.7
4,033,279	-		GFF4002	0.82	-0.2
4,033,292	-		GFF4002	0.82	-0.7
4,033,294	+		GFF4002	0.82	-0.4
4,033,294	+		GFF4002	0.82	+0.0
4,033,337	+		GFF4002	0.85	+0.7
4,033,347	-		GFF4002	0.86	-1.2
4,033,350	+		GFF4002	0.86	+0.0
4,033,350	+		GFF4002	0.86	-0.3
4,033,352	-		GFF4002	0.86	+0.2
4,033,362	+		GFF4002	0.87	-0.8
4,033,362	+		GFF4002	0.87	+0.6
4,033,367	+		GFF4002	0.87	+1.2
4,033,369	-		GFF4002	0.87	-0.6
4,033,380	-		GFF4002	0.88	-0.0
4,033,404	-		GFF4002	0.89	-1.3
4,033,404	-		GFF4002	0.89	-1.6
4,033,411	+		GFF4002	0.90	+0.2
4,033,411	+		GFF4002	0.90	+1.1
4,033,411	+		GFF4002	0.90	-1.6
4,033,411	+		GFF4002	0.90	-0.2
4,033,411	+		GFF4002	0.90	+1.4
4,033,411	+		GFF4002	0.90	-2.6
4,033,411	+		GFF4002	0.90	+1.7
4,033,411	+		GFF4002	0.90	-0.6
4,033,411	+		GFF4002	0.90	+0.2
4,033,411	+		GFF4002	0.90	+0.5
4,033,411	+		GFF4002	0.90	+1.5
4,033,411	+		GFF4002	0.90	-1.4
4,033,411	+		GFF4002	0.90	+1.0
4,033,411	+		GFF4002	0.90	+0.1
4,033,419	-				-1.9
4,033,419	-				+0.3
4,033,419	-				-2.1
4,033,419	-				+0.8
4,033,419	-				-0.8
4,033,419	-				+1.2
4,033,419	-				+0.1
4,033,419	-				-2.3
4,033,419	-				-1.4
4,033,419	-				-0.6
4,033,419	-				-0.8
4,033,419	-				-2.4
4,033,419	-				+0.2
4,033,419	-				+0.4
4,033,419	-				+1.2
4,033,419	-				-0.6
4,033,419	-				-0.2
4,033,419	-				+0.0
4,033,419	-				-2.1
4,033,419	-				+1.3
4,033,452	+				+0.5
4,033,457	-				-1.2
4,033,462	+				-0.9
4,033,493	-				-1.8
4,033,495	+				-0.6
4,033,502	+				+0.3
4,033,510	-				-1.3
4,033,510	-				-1.1
4,033,511	-				+1.2
4,033,533	+				-0.9
4,033,533	+				-0.0
4,033,541	-				-1.6
4,033,543	-				-0.2
4,033,585	-				-0.2
4,033,629	+		GFF4003	0.19	+0.3
4,033,661	-		GFF4003	0.33	-0.0
4,033,678	-		GFF4003	0.40	+0.1
4,033,678	-		GFF4003	0.40	-0.2
4,033,754	+		GFF4003	0.71	-0.6
4,033,754	+		GFF4003	0.71	-1.7
4,033,754	+		GFF4003	0.71	-1.2
4,033,754	+		GFF4003	0.71	-1.0
4,033,754	+		GFF4003	0.71	+1.5
4,033,754	+		GFF4003	0.71	+1.7
4,033,754	+		GFF4003	0.71	-1.3
4,033,754	+		GFF4003	0.71	+0.0
4,033,754	+		GFF4003	0.71	-0.6
4,033,754	+		GFF4003	0.71	+0.2
4,033,754	+		GFF4003	0.71	-1.2
4,033,754	+		GFF4003	0.71	-0.9
4,033,754	+		GFF4003	0.71	-0.3
4,033,754	+		GFF4003	0.71	-0.5
4,033,754	+		GFF4003	0.71	+1.1
4,033,762	-		GFF4003	0.74	-0.6
4,033,762	-		GFF4003	0.74	-1.4
4,033,762	-		GFF4003	0.74	-0.8
4,033,762	-		GFF4003	0.74	-0.5
4,033,762	-		GFF4003	0.74	-1.0
4,033,762	-		GFF4003	0.74	-1.8
4,033,762	-		GFF4003	0.74	-2.6
4,033,762	-		GFF4003	0.74	+1.2
4,033,762	-		GFF4003	0.74	-0.2
4,033,762	-		GFF4003	0.74	+0.8
4,033,762	-		GFF4003	0.74	+0.3
4,033,762	-		GFF4003	0.74	-1.0
4,033,762	-		GFF4003	0.74	+0.1
4,033,762	-		GFF4003	0.74	-0.7
4,033,762	-		GFF4003	0.74	-0.1
4,033,762	-		GFF4003	0.74	-0.6
4,033,762	-		GFF4003	0.74	-2.2
4,033,762	-		GFF4003	0.74	-1.0
4,033,762	-		GFF4003	0.74	-0.4
4,033,762	-		GFF4003	0.74	-1.1
4,033,762	-		GFF4003	0.74	-0.5
4,033,762	-		GFF4003	0.74	-1.4
4,033,762	-		GFF4003	0.74	+0.4
4,033,762	-		GFF4003	0.74	-0.2
4,033,762	-		GFF4003	0.74	-1.4
4,033,762	-		GFF4003	0.74	-0.0
4,033,762	-		GFF4003	0.74	+0.1
4,033,767	-		GFF4003	0.76	-0.1
4,033,778	+		GFF4003	0.81	-1.2
4,033,787	+		GFF4003	0.84	+1.6
4,033,793	+		GFF4003	0.87	-0.5
4,033,799	+		GFF4003	0.89	-1.2
4,033,799	+		GFF4003	0.89	-2.0
4,033,799	+		GFF4003	0.89	-0.3
4,033,799	+		GFF4003	0.89	-0.6
4,033,807	-				-0.7
4,033,807	-				-1.9
4,033,812	-				+1.1
4,033,822	-				-0.8
4,033,826	+				-0.7
4,033,827	+				-1.0
4,033,827	-				-0.9
4,033,834	-				-1.4
4,033,834	-				+0.6
4,033,863	-				+0.5
4,033,865	+				+0.7
4,033,865	+				-1.2
4,033,868	-				-0.4
4,033,870	+				+0.8
4,033,873	-				-0.4
4,033,903	+				+0.5
4,033,904	-				+0.8
4,033,905	+				+1.2
4,033,913	-				+0.6
4,033,915	+				+0.8
4,033,919	-				-2.2
4,033,923	-				-1.0
4,033,932	-				+0.6
4,033,938	+				+0.5
4,033,946	-				+0.6
4,033,954	+				-0.6
4,033,959	+				+0.1
4,033,962	-				+0.2
4,033,962	-				+0.2
4,033,984	-				-0.6
4,033,984	-				-0.4
4,033,985	-				-0.4
4,033,985	-				-0.9
4,033,985	-				-1.1
4,033,986	+				-1.8
4,033,986	+				-0.4
4,033,997	+				+0.7
4,034,012	+				+0.1
4,034,020	-				-0.2
4,034,041	-				+0.5
4,034,072	+		GFF4004	0.11	+0.4
4,034,082	+		GFF4004	0.11	-1.3
4,034,084	+		GFF4004	0.12	+0.2
4,034,084	+		GFF4004	0.12	+0.6
4,034,095	+		GFF4004	0.12	+0.7
4,034,133	-		GFF4004	0.14	+0.6
4,034,155	+		GFF4004	0.15	+0.6
4,034,155	+		GFF4004	0.15	+0.4
4,034,160	+		GFF4004	0.15	-1.7
4,034,160	+		GFF4004	0.15	+1.2
4,034,168	-		GFF4004	0.15	+0.3
4,034,188	+		GFF4004	0.16	+0.4
4,034,204	+		GFF4004	0.17	-0.3
4,034,204	+		GFF4004	0.17	-0.0
4,034,204	+		GFF4004	0.17	-0.1
4,034,204	+		GFF4004	0.17	+0.3
4,034,204	+		GFF4004	0.17	-0.9
4,034,212	-		GFF4004	0.17	+0.2
4,034,212	-		GFF4004	0.17	-0.7
4,034,212	-		GFF4004	0.17	-0.7
4,034,218	-		GFF4004	0.18	-0.5
4,034,218	-		GFF4004	0.18	-0.5
4,034,226	+		GFF4004	0.18	-1.2
4,034,226	+		GFF4004	0.18	+0.9
4,034,226	+		GFF4004	0.18	-1.3
4,034,244	-		GFF4004	0.19	-0.7
4,034,246	+		GFF4004	0.19	+0.6
4,034,254	-		GFF4004	0.19	-1.4
4,034,254	-		GFF4004	0.19	+0.3
4,034,254	-		GFF4004	0.19	-1.4
4,034,274	+		GFF4004	0.20	-2.1
4,034,278	-		GFF4004	0.20	-0.5
4,034,279	+		GFF4004	0.20	-1.0
4,034,282	-		GFF4004	0.21	-1.7
4,034,304	+		GFF4004	0.22	-0.4
4,034,304	+		GFF4004	0.22	-1.1
4,034,312	-		GFF4004	0.22	-0.4
4,034,314	+		GFF4004	0.22	-1.1
4,034,327	+		GFF4004	0.23	-0.4
4,034,327	+		GFF4004	0.23	+0.3
4,034,327	-		GFF4004	0.23	-1.0
4,034,335	-		GFF4004	0.23	-1.5
4,034,335	-		GFF4004	0.23	-1.9
4,034,335	-		GFF4004	0.23	-0.6
4,034,342	+		GFF4004	0.23	-0.4
4,034,343	+		GFF4004	0.23	-1.0
4,034,351	-		GFF4004	0.24	+0.0
4,034,356	+		GFF4004	0.24	-1.2
4,034,356	-		GFF4004	0.24	-1.1
4,034,363	-		GFF4004	0.24	-0.2
4,034,369	+		GFF4004	0.25	-1.2
4,034,377	-		GFF4004	0.25	+1.9
4,034,382	-		GFF4004	0.25	-1.0
4,034,415	+		GFF4004	0.27	-1.0
4,034,423	-		GFF4004	0.27	-0.3
4,034,443	+		GFF4004	0.28	-1.4
4,034,452	+		GFF4004	0.28	-1.3
4,034,462	-		GFF4004	0.29	+0.9
4,034,466	+		GFF4004	0.29	-1.2
4,034,466	+		GFF4004	0.29	-0.8
4,034,466	+		GFF4004	0.29	-1.2
4,034,466	+		GFF4004	0.29	-0.6
4,034,466	+		GFF4004	0.29	-0.2
4,034,466	+		GFF4004	0.29	-0.2
4,034,474	-		GFF4004	0.29	-0.1
4,034,474	-		GFF4004	0.29	+0.4
4,034,474	-		GFF4004	0.29	-0.4
4,034,474	-		GFF4004	0.29	-0.7
4,034,474	-		GFF4004	0.29	+0.8
4,034,474	-		GFF4004	0.29	-2.4
4,034,500	+		GFF4004	0.31	+0.4
4,034,520	+		GFF4004	0.31	-0.6
4,034,520	+		GFF4004	0.31	-0.9
4,034,528	+		GFF4004	0.32	-1.0
4,034,590	-		GFF4004	0.35	-0.7
4,034,598	+		GFF4004	0.35	-0.1
4,034,598	+		GFF4004	0.35	+0.6
4,034,599	-		GFF4004	0.35	+0.1
4,034,615	+		GFF4004	0.36	+1.1
4,034,619	+		GFF4004	0.36	-1.5
4,034,626	-		GFF4004	0.36	+0.8
4,034,632	+		GFF4004	0.37	-0.9
4,034,632	+		GFF4004	0.37	-0.9
4,034,632	+		GFF4004	0.37	+0.5
4,034,634	+		GFF4004	0.37	+0.8
4,034,640	-		GFF4004	0.37	+0.2
4,034,645	-		GFF4004	0.37	+1.5
4,034,645	-		GFF4004	0.37	-0.4
4,034,646	+		GFF4004	0.37	-0.2
4,034,663	+		GFF4004	0.38	+1.6
4,034,681	-		GFF4004	0.39	-1.0
4,034,693	+		GFF4004	0.39	-0.7
4,034,706	+		GFF4004	0.40	-0.4
4,034,716	+		GFF4004	0.40	-2.1
4,034,721	+		GFF4004	0.41	+0.4
4,034,721	+		GFF4004	0.41	+0.2
4,034,721	+		GFF4004	0.41	-0.2
4,034,721	+		GFF4004	0.41	-0.5
4,034,721	+		GFF4004	0.41	-0.2
4,034,726	+		GFF4004	0.41	-0.7
4,034,728	+		GFF4004	0.41	-0.5
4,034,729	-		GFF4004	0.41	-1.0
4,034,734	-		GFF4004	0.41	-0.6
4,034,734	-		GFF4004	0.41	-0.4
4,034,734	-		GFF4004	0.41	-1.8
4,034,734	-		GFF4004	0.41	-0.7
4,034,734	-		GFF4004	0.41	+1.3
4,034,734	-		GFF4004	0.41	+1.4
4,034,734	-		GFF4004	0.41	+1.3
4,034,734	-		GFF4004	0.41	-0.8
4,034,734	-		GFF4004	0.41	+0.3
4,034,754	-		GFF4004	0.42	+0.2
4,034,759	-		GFF4004	0.42	+0.6
4,034,768	+		GFF4004	0.43	+0.3
4,034,770	+		GFF4004	0.43	-0.3
4,034,778	+		GFF4004	0.43	-1.8
4,034,778	+		GFF4004	0.43	-2.3
4,034,778	+		GFF4004	0.43	+0.2
4,034,778	+		GFF4004	0.43	-0.4
4,034,778	+		GFF4004	0.43	-1.1
4,034,778	+		GFF4004	0.43	+0.9
4,034,780	-		GFF4004	0.43	-0.5
4,034,781	-		GFF4004	0.43	-2.8
4,034,781	-		GFF4004	0.43	-1.7
4,034,783	+		GFF4004	0.43	+0.4
4,034,783	+		GFF4004	0.43	-0.4
4,034,786	-		GFF4004	0.44	-1.8
4,034,788	+		GFF4004	0.44	+0.2
4,034,788	+		GFF4004	0.44	-0.7
4,034,788	+		GFF4004	0.44	-0.2
4,034,788	+		GFF4004	0.44	-0.4
4,034,788	+		GFF4004	0.44	-1.4
4,034,788	+		GFF4004	0.44	-1.3
4,034,788	+		GFF4004	0.44	-2.2
4,034,788	+		GFF4004	0.44	+0.4
4,034,788	+		GFF4004	0.44	-0.6
4,034,791	-		GFF4004	0.44	-0.8
4,034,791	-		GFF4004	0.44	-2.2
4,034,791	-		GFF4004	0.44	+0.4
4,034,796	-		GFF4004	0.44	+0.4
4,034,796	-		GFF4004	0.44	+2.6
4,034,796	-		GFF4004	0.44	-0.3
4,034,796	-		GFF4004	0.44	-0.5
4,034,796	-		GFF4004	0.44	+0.9
4,034,796	-		GFF4004	0.44	+1.2
4,034,796	-		GFF4004	0.44	-1.6