Strain Fitness in Sphingobium sp. HT1-2 around GFF2885

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,945,073	-				-1.6
2,945,104	-				-1.2
2,945,127	+				-0.6
2,945,160	+				+0.2
2,945,180	-				-1.0
2,945,242	+				-1.6
2,945,249	-		GFF2884	0.11	-1.4
2,945,259	-		GFF2884	0.12	+0.1
2,945,259	-		GFF2884	0.12	+1.9
2,945,265	+		GFF2884	0.12	-0.4
2,945,273	-		GFF2884	0.13	+1.2
2,945,283	-		GFF2884	0.14	-0.5
2,945,372	-		GFF2884	0.24	+0.7
2,945,409	-		GFF2884	0.29	-0.6
2,945,412	-		GFF2884	0.29	+0.1
2,945,418	+		GFF2884	0.30	+0.1
2,945,418	+		GFF2884	0.30	-0.9
2,945,420	+		GFF2884	0.30	-0.1
2,945,426	-		GFF2884	0.30	+1.1
2,945,426	-		GFF2884	0.30	+0.4
2,945,499	+		GFF2884	0.39	-1.1
2,945,504	+		GFF2884	0.39	-1.3
2,945,579	+		GFF2884	0.48	-0.5
2,945,613	-		GFF2884	0.51	-1.1
2,945,615	+		GFF2884	0.52	+0.6
2,945,615	+		GFF2884	0.52	-0.3
2,945,615	+		GFF2884	0.52	-0.3
2,945,615	+		GFF2884	0.52	-0.1
2,945,615	+		GFF2884	0.52	-2.0
2,945,615	+		GFF2884	0.52	-1.5
2,945,615	+		GFF2884	0.52	-1.6
2,945,617	-		GFF2884	0.52	-1.2
2,945,636	+		GFF2884	0.54	-0.7
2,945,647	+		GFF2884	0.55	-0.3
2,945,647	+		GFF2884	0.55	+0.3
2,945,647	+		GFF2884	0.55	-0.6
2,945,647	+		GFF2884	0.55	-0.7
2,945,647	+		GFF2884	0.55	-0.8
2,945,650	-		GFF2884	0.55	-0.9
2,945,650	-		GFF2884	0.55	-1.1
2,945,655	-		GFF2884	0.56	-1.8
2,945,655	-		GFF2884	0.56	-0.9
2,945,655	-		GFF2884	0.56	+0.2
2,945,655	-		GFF2884	0.56	+0.3
2,945,655	-		GFF2884	0.56	+0.1
2,945,655	-		GFF2884	0.56	-0.1
2,945,655	-		GFF2884	0.56	+0.5
2,945,657	+		GFF2884	0.56	-0.7
2,945,657	+		GFF2884	0.56	-0.9
2,945,682	+		GFF2884	0.59	-1.6
2,945,718	+		GFF2884	0.63	-0.6
2,945,719	+		GFF2884	0.63	+0.9
2,945,727	-		GFF2884	0.64	-1.1
2,945,729	+		GFF2884	0.64	+0.7
2,945,737	-		GFF2884	0.65	+0.1
2,945,739	+		GFF2884	0.65	-1.6
2,945,739	+		GFF2884	0.65	-0.7
2,945,739	+		GFF2884	0.65	-0.5
2,945,746	-		GFF2884	0.66	-0.3
2,945,747	-		GFF2884	0.66	-0.5
2,945,754	+		GFF2884	0.67	+0.3
2,945,763	+		GFF2884	0.68	-1.2
2,945,766	-		GFF2884	0.68	+0.9
2,945,771	-		GFF2884	0.69	+0.7
2,945,799	-		GFF2884	0.72	+1.1
2,945,804	-		GFF2884	0.73	-0.6
2,945,825	-		GFF2884	0.75	-1.7
2,945,830	-		GFF2884	0.76	+0.6
2,945,856	+		GFF2884	0.79	+2.0
2,945,856	+		GFF2884	0.79	-0.6
2,945,856	+		GFF2884	0.79	+0.5
2,945,856	+		GFF2884	0.79	-1.1
2,945,856	+		GFF2884	0.79	-1.4
2,945,864	-		GFF2884	0.79	-0.9
2,945,864	-		GFF2884	0.79	+0.0
2,945,864	-		GFF2884	0.79	+0.3
2,945,903	+		GFF2884	0.84	+0.4
2,945,905	+		GFF2884	0.84	+0.1
2,945,908	-		GFF2884	0.84	-0.5
2,945,922	+		GFF2884	0.86	+0.4
2,945,922	+		GFF2884	0.86	-0.3
2,945,922	+		GFF2884	0.86	+0.3
2,945,922	+		GFF2884	0.86	+0.2
2,945,922	+		GFF2884	0.86	-0.7
2,945,922	+		GFF2884	0.86	-0.5
2,945,922	+		GFF2884	0.86	-0.7
2,945,922	+		GFF2884	0.86	-1.5
2,945,922	+		GFF2884	0.86	-0.6
2,945,922	+		GFF2884	0.86	-0.8
2,945,922	+		GFF2884	0.86	-0.6
2,945,922	+		GFF2884	0.86	-1.1
2,945,922	+		GFF2884	0.86	-2.2
2,945,930	-		GFF2884	0.87	-1.2
2,945,930	-		GFF2884	0.87	-2.8
2,945,930	-		GFF2884	0.87	+0.9
2,945,930	-		GFF2884	0.87	+0.2
2,945,930	-		GFF2884	0.87	-0.7
2,945,930	-		GFF2884	0.87	-1.1
2,945,930	-		GFF2884	0.87	+0.9
2,945,930	-		GFF2884	0.87	-0.7
2,945,930	-		GFF2884	0.87	+0.4
2,945,930	-		GFF2884	0.87	-1.3
2,945,930	-		GFF2884	0.87	-0.6
2,945,930	-		GFF2884	0.87	-0.0
2,945,930	-		GFF2884	0.87	+0.2
2,945,957	+		GFF2884	0.90	-0.0
2,945,965	-				+0.4
2,945,965	-				+0.5
2,945,965	-				-0.5
2,946,023	+				-0.4
2,946,023	+				-0.6
2,946,023	-				-1.8
2,946,031	-				+0.3
2,946,031	-				-0.3
2,946,031	-				+0.5
2,946,031	-				-0.5
2,946,031	-				-1.1
2,946,043	+				-0.3
2,946,051	-				-0.7
2,946,054	+				-2.2
2,946,054	+				-1.9
2,946,055	+				-0.6
2,946,063	-				-0.1
2,946,063	-				+0.7
2,946,068	-				-2.1
2,946,078	+				-0.6
2,946,078	+				-1.8
2,946,078	+				+0.2
2,946,086	-				-1.9
2,946,086	-				+0.0
2,946,086	-				+0.0
2,946,132	+				+0.2
2,946,137	+				-0.2
2,946,137	+				-0.8
2,946,137	+				-0.6
2,946,137	+				+0.2
2,946,140	-				-0.2
2,946,145	-				-0.3
2,946,145	-				+0.1
2,946,160	+				-0.0
2,946,160	+				-0.7
2,946,165	+		GFF2885	0.10	-1.0
2,946,165	+		GFF2885	0.10	-0.5
2,946,168	-		GFF2885	0.11	-1.1
2,946,173	-		GFF2885	0.11	+0.1
2,946,188	-		GFF2885	0.13	+1.3
2,946,209	+		GFF2885	0.15	-1.3
2,946,218	-		GFF2885	0.16	-0.7
2,946,220	-		GFF2885	0.16	-1.5
2,946,248	+		GFF2885	0.19	-0.9
2,946,313	+		GFF2885	0.25	-0.8
2,946,317	-		GFF2885	0.26	+0.8
2,946,317	-		GFF2885	0.26	-0.4
2,946,321	+		GFF2885	0.26	+0.5
2,946,340	+		GFF2885	0.28	-0.7
2,946,340	+		GFF2885	0.28	-0.5
2,946,340	+		GFF2885	0.28	-0.9
2,946,340	+		GFF2885	0.28	-0.2
2,946,340	+		GFF2885	0.28	+0.0
2,946,348	-		GFF2885	0.29	-1.1
2,946,348	-		GFF2885	0.29	+0.0
2,946,348	-		GFF2885	0.29	-0.8
2,946,348	-		GFF2885	0.29	+0.1
2,946,350	+		GFF2885	0.29	+0.8
2,946,353	+		GFF2885	0.29	-0.8
2,946,353	+		GFF2885	0.29	-0.3
2,946,353	+		GFF2885	0.29	+0.6
2,946,353	+		GFF2885	0.29	-0.3
2,946,353	+		GFF2885	0.29	-0.1
2,946,353	+		GFF2885	0.29	+0.8
2,946,353	-		GFF2885	0.29	+1.4
2,946,358	-		GFF2885	0.30	-0.2
2,946,387	+		GFF2885	0.33	-1.3
2,946,395	-		GFF2885	0.34	+0.1
2,946,397	-		GFF2885	0.34	-1.6
2,946,406	+		GFF2885	0.35	+0.1
2,946,408	+		GFF2885	0.35	+0.3
2,946,415	-		GFF2885	0.36	+0.7
2,946,442	+		GFF2885	0.38	+0.5
2,946,478	+		GFF2885	0.42	-0.2
2,946,478	+		GFF2885	0.42	-0.9
2,946,478	+		GFF2885	0.42	-0.0
2,946,478	-		GFF2885	0.42	+0.3
2,946,478	-		GFF2885	0.42	+0.9
2,946,478	-		GFF2885	0.42	-1.0
2,946,478	-		GFF2885	0.42	-0.2
2,946,486	-		GFF2885	0.43	-0.5
2,946,486	-		GFF2885	0.43	-0.3
2,946,486	-		GFF2885	0.43	+0.3
2,946,486	-		GFF2885	0.43	-0.9
2,946,532	-		GFF2885	0.47	-0.7
2,946,542	-		GFF2885	0.48	-1.5
2,946,552	+		GFF2885	0.49	-1.0
2,946,552	-		GFF2885	0.49	+0.3
2,946,552	-		GFF2885	0.49	-0.1
2,946,560	-		GFF2885	0.50	-0.9
2,946,560	-		GFF2885	0.50	-0.5
2,946,560	-		GFF2885	0.50	+1.2
2,946,570	-		GFF2885	0.51	+0.2
2,946,570	-		GFF2885	0.51	+0.7
2,946,570	-		GFF2885	0.51	+0.3
2,946,594	-		GFF2885	0.54	-1.0
2,946,597	+		GFF2885	0.54	-0.5
2,946,607	+		GFF2885	0.55	+0.8
2,946,607	+		GFF2885	0.55	-0.1
2,946,615	-		GFF2885	0.56	-0.4
2,946,618	+		GFF2885	0.56	-1.6
2,946,633	+		GFF2885	0.58	-0.2
2,946,636	+		GFF2885	0.58	+0.9
2,946,641	+		GFF2885	0.58	+1.6
2,946,641	+		GFF2885	0.58	-0.4
2,946,644	-		GFF2885	0.59	-0.4
2,946,644	-		GFF2885	0.59	-0.5
2,946,646	+		GFF2885	0.59	-1.1
2,946,649	-		GFF2885	0.59	+1.1
2,946,651	+		GFF2885	0.59	+0.1
2,946,651	+		GFF2885	0.59	-1.1
2,946,651	+		GFF2885	0.59	-1.0
2,946,659	-		GFF2885	0.60	+1.1
2,946,659	-		GFF2885	0.60	-1.5
2,946,659	-		GFF2885	0.60	-1.0
2,946,659	-		GFF2885	0.60	+0.6
2,946,659	-		GFF2885	0.60	-1.1
2,946,659	-		GFF2885	0.60	-1.6
2,946,659	-		GFF2885	0.60	-0.8
2,946,659	-		GFF2885	0.60	-1.0
2,946,684	+		GFF2885	0.63	+1.0
2,946,684	+		GFF2885	0.63	-1.2
2,946,690	-		GFF2885	0.63	-0.7
2,946,690	-		GFF2885	0.63	-0.8
2,946,692	-		GFF2885	0.64	-0.2
2,946,716	+		GFF2885	0.66	-0.4
2,946,722	+		GFF2885	0.67	+0.5
2,946,730	-		GFF2885	0.67	+0.3
2,946,730	-		GFF2885	0.67	-0.7
2,946,739	-		GFF2885	0.68	-0.5
2,946,747	-		GFF2885	0.69	-0.7
2,946,759	+		GFF2885	0.70	-1.0
2,946,762	+		GFF2885	0.71	+1.1
2,946,769	-		GFF2885	0.71	-0.1
2,946,780	-		GFF2885	0.73	-2.5
2,946,788	+		GFF2885	0.73	-0.7
2,946,805	+		GFF2885	0.75	-1.8
2,946,811	+		GFF2885	0.76	-0.3
2,946,811	+		GFF2885	0.76	-1.4
2,946,811	+		GFF2885	0.76	-1.6
2,946,819	-		GFF2885	0.76	+0.5
2,946,819	-		GFF2885	0.76	-0.7
2,946,821	+		GFF2885	0.77	-0.8
2,946,821	+		GFF2885	0.77	-0.8
2,946,829	-		GFF2885	0.77	-1.2
2,946,829	-		GFF2885	0.77	+0.3
2,946,829	-		GFF2885	0.77	-0.6
2,946,843	+		GFF2885	0.79	-0.7
2,946,887	-		GFF2885	0.83	-0.4
2,946,887	-		GFF2885	0.83	-1.9
2,946,890	+		GFF2885	0.84	+0.1
2,946,900	+		GFF2885	0.85	+0.7
2,946,918	-		GFF2885	0.86	-1.1
2,946,921	+		GFF2885	0.87	-0.3
2,946,921	+		GFF2885	0.87	-0.5
2,946,924	-		GFF2885	0.87	+0.7
2,946,947	+		GFF2885	0.89	+1.1
2,946,952	-		GFF2885	0.90	+0.3
2,946,959	+				+1.9
2,946,959	+				-0.0
2,946,962	-				+0.7
2,946,988	-				+0.4
2,947,007	-				+0.6
2,947,094	-				-1.3
2,947,107	+				+0.1
2,947,117	+				-0.7
2,947,117	-				-0.4
2,947,124	+				-1.6
2,947,124	+				-0.6
2,947,124	+				-2.1
2,947,124	+				+0.0
2,947,124	+				-1.0
2,947,124	+				-1.6
2,947,124	-				-1.3
2,947,132	-				+1.2
2,947,132	-				+0.2
2,947,134	+				-1.3
2,947,211	-				-0.6
2,947,263	+		GFF2886	0.12	-0.1
2,947,282	+		GFF2886	0.14	-0.8
2,947,289	-		GFF2886	0.16	+0.8
2,947,299	+		GFF2886	0.17	-0.5
2,947,306	+		GFF2886	0.18	+0.0
2,947,318	+		GFF2886	0.20	-1.6
2,947,325	+		GFF2886	0.21	+1.7
2,947,326	-		GFF2886	0.21	-0.4
2,947,328	-		GFF2886	0.21	-1.0
2,947,333	-		GFF2886	0.22	+0.9
2,947,350	+		GFF2886	0.25	-1.0
2,947,350	+		GFF2886	0.25	+1.1
2,947,353	-		GFF2886	0.25	+0.4
2,947,353	-		GFF2886	0.25	-0.7
2,947,358	-		GFF2886	0.26	+0.3
2,947,384	+		GFF2886	0.30	+0.7
2,947,387	+		GFF2886	0.30	+0.2
2,947,387	+		GFF2886	0.30	-0.2
2,947,387	+		GFF2886	0.30	+1.3
2,947,387	+		GFF2886	0.30	-1.5
2,947,387	+		GFF2886	0.30	-0.7
2,947,387	+		GFF2886	0.30	-1.0
2,947,387	+		GFF2886	0.30	-0.9
2,947,387	+		GFF2886	0.30	-0.9
2,947,387	+		GFF2886	0.30	-1.7
2,947,387	+		GFF2886	0.30	-1.3
2,947,387	+		GFF2886	0.30	-0.6
2,947,387	+		GFF2886	0.30	+1.1
2,947,387	+		GFF2886	0.30	-1.1
2,947,387	+		GFF2886	0.30	-0.4
2,947,387	+		GFF2886	0.30	+0.1
2,947,387	+		GFF2886	0.30	+1.2
2,947,395	-		GFF2886	0.31	+0.2
2,947,395	-		GFF2886	0.31	-1.1
2,947,395	-		GFF2886	0.31	-0.1
2,947,395	-		GFF2886	0.31	+0.9
2,947,395	-		GFF2886	0.31	-0.7
2,947,395	-		GFF2886	0.31	-0.5
2,947,395	-		GFF2886	0.31	-0.6
2,947,395	-		GFF2886	0.31	+0.4
2,947,395	-		GFF2886	0.31	+1.2
2,947,395	-		GFF2886	0.31	+0.3
2,947,395	-		GFF2886	0.31	+1.2
2,947,395	-		GFF2886	0.31	+0.2
2,947,395	-		GFF2886	0.31	+1.1
2,947,395	-		GFF2886	0.31	-1.2
2,947,395	-		GFF2886	0.31	-1.6
2,947,395	-		GFF2886	0.31	+0.0
2,947,395	-		GFF2886	0.31	-0.5
2,947,395	-		GFF2886	0.31	-1.1
2,947,395	-		GFF2886	0.31	-0.5
2,947,443	-		GFF2886	0.39	-1.9
2,947,443	-		GFF2886	0.39	-0.9
2,947,443	-		GFF2886	0.39	-2.2
2,947,443	-		GFF2886	0.39	+0.7
2,947,449	+		GFF2886	0.39	+0.5
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