Strain Fitness in Sphingobium sp. HT1-2 around GFF2736

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,761,540	+		GFF2735	0.25	-0.6
2,761,542	+		GFF2735	0.26	-1.5
2,761,548	+		GFF2735	0.26	-0.2
2,761,548	-		GFF2735	0.26	-1.1
2,761,556	-		GFF2735	0.27	+0.4
2,761,566	+		GFF2735	0.27	-1.1
2,761,569	-		GFF2735	0.28	+0.6
2,761,644	-		GFF2735	0.33	-0.3
2,761,658	-		GFF2735	0.34	-0.3
2,761,686	-		GFF2735	0.36	-0.6
2,761,686	-		GFF2735	0.36	-0.6
2,761,690	+		GFF2735	0.37	+0.3
2,761,690	+		GFF2735	0.37	+0.6
2,761,698	-		GFF2735	0.37	-0.9
2,761,700	+		GFF2735	0.37	+0.7
2,761,708	-		GFF2735	0.38	-0.5
2,761,732	+		GFF2735	0.40	+0.6
2,761,732	+		GFF2735	0.40	-0.6
2,761,734	+		GFF2735	0.40	-2.3
2,761,735	-		GFF2735	0.40	-0.3
2,761,740	-		GFF2735	0.40	+1.8
2,761,750	-		GFF2735	0.41	-0.3
2,761,750	-		GFF2735	0.41	-0.6
2,761,750	-		GFF2735	0.41	+0.5
2,761,769	+		GFF2735	0.43	+1.2
2,761,773	-		GFF2735	0.43	-2.0
2,761,777	-		GFF2735	0.43	-0.1
2,761,777	-		GFF2735	0.43	+0.7
2,761,780	+		GFF2735	0.43	-0.5
2,761,780	+		GFF2735	0.43	-1.5
2,761,788	-		GFF2735	0.44	+0.7
2,761,793	-		GFF2735	0.44	-0.5
2,761,842	+		GFF2735	0.48	-0.7
2,761,850	-		GFF2735	0.49	-0.3
2,761,850	-		GFF2735	0.49	-0.9
2,761,865	+		GFF2735	0.50	+0.7
2,761,885	-		GFF2735	0.51	+0.6
2,761,908	-		GFF2735	0.53	+0.4
2,761,911	+		GFF2735	0.53	-1.9
2,761,919	-		GFF2735	0.54	-0.7
2,761,919	-		GFF2735	0.54	-0.3
2,761,919	-		GFF2735	0.54	-0.3
2,761,945	-		GFF2735	0.56	+0.1
2,761,946	+		GFF2735	0.56	+1.0
2,761,948	+		GFF2735	0.56	-1.1
2,761,948	+		GFF2735	0.56	-0.7
2,761,948	+		GFF2735	0.56	-1.4
2,761,948	+		GFF2735	0.56	-1.8
2,761,949	-		GFF2735	0.56	-0.3
2,761,956	-		GFF2735	0.57	+0.8
2,761,977	-		GFF2735	0.58	-1.7
2,761,977	-		GFF2735	0.58	-0.5
2,761,979	-		GFF2735	0.58	+0.2
2,761,990	+		GFF2735	0.59	+0.1
2,762,000	+		GFF2735	0.60	-0.3
2,762,003	-		GFF2735	0.60	-0.3
2,762,016	-		GFF2735	0.61	+1.3
2,762,017	+		GFF2735	0.61	-0.6
2,762,050	+		GFF2735	0.64	-1.3
2,762,075	+		GFF2735	0.66	-0.2
2,762,106	+		GFF2735	0.68	+0.5
2,762,114	-		GFF2735	0.68	-0.5
2,762,119	-		GFF2735	0.69	+0.7
2,762,120	-		GFF2735	0.69	-1.3
2,762,130	+		GFF2735	0.70	-0.6
2,762,130	+		GFF2735	0.70	-1.6
2,762,130	+		GFF2735	0.70	-0.7
2,762,130	+		GFF2735	0.70	-0.8
2,762,130	+		GFF2735	0.70	-0.8
2,762,130	+		GFF2735	0.70	-0.8
2,762,130	+		GFF2735	0.70	+0.2
2,762,130	+		GFF2735	0.70	-0.4
2,762,130	+		GFF2735	0.70	-1.3
2,762,130	+		GFF2735	0.70	-0.7
2,762,130	+		GFF2735	0.70	+0.5
2,762,130	+		GFF2735	0.70	+0.2
2,762,130	+		GFF2735	0.70	-2.3
2,762,130	+		GFF2735	0.70	+0.1
2,762,130	+		GFF2735	0.70	+0.2
2,762,138	-		GFF2735	0.70	-0.3
2,762,138	-		GFF2735	0.70	-1.1
2,762,138	-		GFF2735	0.70	+0.4
2,762,138	-		GFF2735	0.70	+0.3
2,762,138	-		GFF2735	0.70	-1.5
2,762,138	-		GFF2735	0.70	+1.2
2,762,138	-		GFF2735	0.70	-1.3
2,762,138	-		GFF2735	0.70	+1.0
2,762,138	-		GFF2735	0.70	-0.5
2,762,138	-		GFF2735	0.70	+0.6
2,762,138	-		GFF2735	0.70	-1.2
2,762,138	-		GFF2735	0.70	-1.2
2,762,138	-		GFF2735	0.70	-0.1
2,762,138	-		GFF2735	0.70	+1.8
2,762,138	-		GFF2735	0.70	-0.7
2,762,138	-		GFF2735	0.70	-1.8
2,762,138	-		GFF2735	0.70	-0.2
2,762,138	-		GFF2735	0.70	+0.4
2,762,138	-		GFF2735	0.70	+0.6
2,762,149	+		GFF2735	0.71	-0.9
2,762,157	-		GFF2735	0.72	-0.6
2,762,157	-		GFF2735	0.72	+0.3
2,762,157	-		GFF2735	0.72	+0.7
2,762,157	-		GFF2735	0.72	-0.3
2,762,159	+		GFF2735	0.72	-1.2
2,762,159	-		GFF2735	0.72	+0.2
2,762,178	-		GFF2735	0.73	+0.6
2,762,191	+		GFF2735	0.74	-0.4
2,762,239	-		GFF2735	0.78	+0.1
2,762,239	-		GFF2735	0.78	-0.7
2,762,282	-		GFF2735	0.81	-0.1
2,762,284	+		GFF2735	0.81	-0.8
2,762,284	+		GFF2735	0.81	+0.7
2,762,284	+		GFF2735	0.81	-0.2
2,762,284	+		GFF2735	0.81	-0.5
2,762,284	+		GFF2735	0.81	+0.2
2,762,284	+		GFF2735	0.81	-0.3
2,762,284	+		GFF2735	0.81	-1.5
2,762,284	+		GFF2735	0.81	-0.1
2,762,284	+		GFF2735	0.81	-0.5
2,762,284	+		GFF2735	0.81	-1.0
2,762,284	+		GFF2735	0.81	+0.0
2,762,289	+		GFF2735	0.82	+0.8
2,762,292	-		GFF2735	0.82	-1.3
2,762,292	-		GFF2735	0.82	+0.2
2,762,292	-		GFF2735	0.82	-0.3
2,762,292	-		GFF2735	0.82	-0.8
2,762,292	-		GFF2735	0.82	+1.0
2,762,292	-		GFF2735	0.82	+1.2
2,762,292	-		GFF2735	0.82	+1.0
2,762,292	-		GFF2735	0.82	-1.3
2,762,292	-		GFF2735	0.82	+0.4
2,762,292	-		GFF2735	0.82	-1.0
2,762,292	-		GFF2735	0.82	+0.3
2,762,292	-		GFF2735	0.82	+0.4
2,762,292	-		GFF2735	0.82	-1.7
2,762,292	-		GFF2735	0.82	-1.0
2,762,292	-		GFF2735	0.82	-1.2
2,762,292	-		GFF2735	0.82	-1.2
2,762,292	-		GFF2735	0.82	+1.3
2,762,307	-		GFF2735	0.83	+0.4
2,762,348	+		GFF2735	0.86	+1.0
2,762,356	-		GFF2735	0.87	-0.8
2,762,368	+		GFF2735	0.87	-0.2
2,762,396	-		GFF2735	0.90	+1.0
2,762,406	+				-1.8
2,762,414	-				-1.3
2,762,415	+				+1.0
2,762,415	-				-1.0
2,762,442	+				-0.3
2,762,445	-				-0.9
2,762,450	-				-1.4
2,762,450	-				-1.1
2,762,450	-				-0.5
2,762,466	-				-2.0
2,762,472	-				-0.1
2,762,482	-				+0.7
2,762,487	+				-1.2
2,762,488	+				-0.5
2,762,509	-				-1.5
2,762,519	-				+0.2
2,762,519	-				+0.0
2,762,540	-				-1.2
2,762,546	+				+0.8
2,762,553	+				-2.6
2,762,559	+				-0.6
2,762,588	-				-2.1
2,762,606	-				-1.7
2,762,606	-				-0.5
2,762,651	-				-0.2
2,762,658	+		GFF2736	0.10	-0.9
2,762,663	+		GFF2736	0.11	+0.6
2,762,671	-		GFF2736	0.11	+0.4
2,762,671	-		GFF2736	0.11	-0.3
2,762,671	-		GFF2736	0.11	-0.1
2,762,681	+		GFF2736	0.12	+1.2
2,762,686	+		GFF2736	0.13	-0.3
2,762,686	+		GFF2736	0.13	+0.7
2,762,686	+		GFF2736	0.13	-1.3
2,762,686	+		GFF2736	0.13	-1.1
2,762,694	-		GFF2736	0.13	-0.6
2,762,694	-		GFF2736	0.13	+0.2
2,762,694	-		GFF2736	0.13	-0.8
2,762,706	-		GFF2736	0.14	+0.0
2,762,716	+		GFF2736	0.15	-0.5
2,762,719	-		GFF2736	0.15	-0.3
2,762,721	+		GFF2736	0.15	+0.2
2,762,729	-		GFF2736	0.16	-1.5
2,762,729	-		GFF2736	0.16	-1.2
2,762,734	+		GFF2736	0.16	-0.9
2,762,734	+		GFF2736	0.16	-1.5
2,762,734	+		GFF2736	0.16	-0.5
2,762,734	+		GFF2736	0.16	-0.7
2,762,734	+		GFF2736	0.16	-0.8
2,762,734	-		GFF2736	0.16	-2.7
2,762,737	-		GFF2736	0.17	+0.2
2,762,737	-		GFF2736	0.17	-0.8
2,762,737	-		GFF2736	0.17	+0.6
2,762,742	-		GFF2736	0.17	-0.0
2,762,742	-		GFF2736	0.17	+0.3
2,762,742	-		GFF2736	0.17	+0.2
2,762,742	-		GFF2736	0.17	-0.2
2,762,742	-		GFF2736	0.17	-1.2
2,762,747	-		GFF2736	0.17	+0.4
2,762,769	+		GFF2736	0.19	+0.9
2,762,769	+		GFF2736	0.19	-0.6
2,762,769	+		GFF2736	0.19	-0.6
2,762,774	+		GFF2736	0.20	-0.5
2,762,774	+		GFF2736	0.20	+2.0
2,762,774	+		GFF2736	0.20	-0.2
2,762,774	+		GFF2736	0.20	+1.0
2,762,777	-		GFF2736	0.20	-0.6
2,762,777	-		GFF2736	0.20	-0.7
2,762,782	-		GFF2736	0.20	-1.1
2,762,782	-		GFF2736	0.20	+1.1
2,762,782	-		GFF2736	0.20	-0.6
2,762,787	-		GFF2736	0.21	-1.2
2,762,819	-		GFF2736	0.23	-1.0
2,762,836	+		GFF2736	0.25	-0.5
2,762,841	+		GFF2736	0.25	-0.8
2,762,844	-		GFF2736	0.25	+0.3
2,762,844	-		GFF2736	0.25	-0.8
2,762,864	+		GFF2736	0.27	+0.4
2,762,872	-		GFF2736	0.28	-1.5
2,762,879	-		GFF2736	0.28	-0.6
2,762,881	-		GFF2736	0.28	+0.5
2,762,881	-		GFF2736	0.28	-0.1
2,762,903	-		GFF2736	0.30	-0.5
2,762,918	-		GFF2736	0.31	+1.7
2,762,919	+		GFF2736	0.31	-0.9
2,762,924	+		GFF2736	0.32	+1.5
2,762,927	-		GFF2736	0.32	-1.7
2,762,927	-		GFF2736	0.32	-1.7
2,762,929	+		GFF2736	0.32	-0.8
2,762,937	-		GFF2736	0.33	-0.1
2,762,937	-		GFF2736	0.33	+1.1
2,762,991	-		GFF2736	0.37	-0.5
2,763,013	-		GFF2736	0.39	-1.1
2,763,020	-		GFF2736	0.40	-1.7
2,763,040	-		GFF2736	0.41	-2.1
2,763,073	+		GFF2736	0.44	-1.7
2,763,074	+		GFF2736	0.44	+0.4
2,763,082	-		GFF2736	0.45	+0.8
2,763,087	-		GFF2736	0.45	-1.1
2,763,092	+		GFF2736	0.45	+0.6
2,763,121	-		GFF2736	0.48	-0.1
2,763,127	+		GFF2736	0.48	+0.4
2,763,127	+		GFF2736	0.48	-0.9
2,763,137	+		GFF2736	0.49	-0.5
2,763,141	-		GFF2736	0.49	+0.0
2,763,173	+		GFF2736	0.52	-0.1
2,763,173	+		GFF2736	0.52	-1.5
2,763,174	+		GFF2736	0.52	+0.5
2,763,181	-		GFF2736	0.53	+0.6
2,763,190	+		GFF2736	0.53	+0.4
2,763,192	+		GFF2736	0.53	+0.0
2,763,192	+		GFF2736	0.53	+0.8
2,763,192	+		GFF2736	0.53	-0.3
2,763,200	-		GFF2736	0.54	-0.6
2,763,200	-		GFF2736	0.54	-1.9
2,763,200	-		GFF2736	0.54	-1.0
2,763,200	-		GFF2736	0.54	-1.2
2,763,200	-		GFF2736	0.54	+0.0
2,763,200	-		GFF2736	0.54	-0.8
2,763,214	+		GFF2736	0.55	+0.5
2,763,214	+		GFF2736	0.55	+0.7
2,763,224	-		GFF2736	0.56	+1.2
2,763,232	+		GFF2736	0.57	-0.1
2,763,232	+		GFF2736	0.57	-0.4
2,763,233	+		GFF2736	0.57	-0.7
2,763,235	-		GFF2736	0.57	+0.1
2,763,240	-		GFF2736	0.57	-0.3
2,763,240	-		GFF2736	0.57	-0.6
2,763,240	-		GFF2736	0.57	-0.1
2,763,240	-		GFF2736	0.57	+1.2
2,763,242	+		GFF2736	0.58	+0.4
2,763,268	+		GFF2736	0.60	-2.0
2,763,276	-		GFF2736	0.60	-0.1
2,763,276	-		GFF2736	0.60	-0.3
2,763,306	+		GFF2736	0.63	-1.7
2,763,342	+		GFF2736	0.66	-1.3
2,763,348	-		GFF2736	0.66	-0.7
2,763,348	-		GFF2736	0.66	-0.3
2,763,348	-		GFF2736	0.66	-0.2
2,763,348	-		GFF2736	0.66	-1.5
2,763,428	+		GFF2736	0.73	-1.1
2,763,428	+		GFF2736	0.73	-0.5
2,763,436	-		GFF2736	0.73	+0.3
2,763,436	-		GFF2736	0.73	-0.5
2,763,436	-		GFF2736	0.73	+0.1
2,763,458	+		GFF2736	0.75	-0.6
2,763,461	-		GFF2736	0.75	-0.8
2,763,463	+		GFF2736	0.75	-1.4
2,763,463	+		GFF2736	0.75	-0.6
2,763,471	-		GFF2736	0.76	-1.1
2,763,474	+		GFF2736	0.76	+0.8
2,763,474	+		GFF2736	0.76	-0.9
2,763,474	+		GFF2736	0.76	-1.3
2,763,474	+		GFF2736	0.76	+0.3
2,763,474	+		GFF2736	0.76	-1.3
2,763,482	-		GFF2736	0.77	-0.9
2,763,482	-		GFF2736	0.77	+0.1
2,763,482	-		GFF2736	0.77	-1.0
2,763,482	-		GFF2736	0.77	-1.3
2,763,482	-		GFF2736	0.77	-0.1
2,763,482	-		GFF2736	0.77	-1.3
2,763,482	-		GFF2736	0.77	+0.3
2,763,482	-		GFF2736	0.77	-0.3
2,763,487	-		GFF2736	0.77	+0.2
2,763,489	+		GFF2736	0.78	-0.1
2,763,497	-		GFF2736	0.78	-0.3
2,763,497	-		GFF2736	0.78	-1.5
2,763,497	-		GFF2736	0.78	-2.4
2,763,499	+		GFF2736	0.78	-1.8
2,763,501	+		GFF2736	0.78	-0.1
2,763,507	-		GFF2736	0.79	-0.6
2,763,507	-		GFF2736	0.79	-0.2
2,763,507	-		GFF2736	0.79	+0.3
2,763,509	-		GFF2736	0.79	-0.6
2,763,514	-		GFF2736	0.80	-1.8
2,763,527	-		GFF2736	0.81	+1.1
2,763,554	+		GFF2736	0.83	-3.0
2,763,554	+		GFF2736	0.83	-0.6
2,763,554	+		GFF2736	0.83	-0.7
2,763,554	+		GFF2736	0.83	-1.0
2,763,557	-		GFF2736	0.83	-0.1
2,763,562	-		GFF2736	0.83	-1.0
2,763,565	-		GFF2736	0.84	-0.6
2,763,565	-		GFF2736	0.84	+0.4
2,763,574	+		GFF2736	0.84	+1.1
2,763,574	+		GFF2736	0.84	-0.1
2,763,574	+		GFF2736	0.84	-2.1
2,763,574	+		GFF2736	0.84	-0.6
2,763,599	+		GFF2736	0.86	-1.6
2,763,599	+		GFF2736	0.86	-2.2
2,763,607	-		GFF2736	0.87	-0.6
2,763,609	-		GFF2736	0.87	-1.7
2,763,609	-		GFF2736	0.87	-0.1
2,763,609	-		GFF2736	0.87	+0.7
2,763,650	+				-1.9
2,763,655	+				+1.6
2,763,655	+				-0.8
2,763,663	-				+1.1
2,763,663	-				+0.8
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