Strain Fitness in Sphingobium sp. HT1-2 around GFF2724

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,747,737	+		GFF2722	0.71	-0.2
2,747,742	+		GFF2722	0.71	-0.7
2,747,756	+		GFF2722	0.73	+0.4
2,747,764	-		GFF2722	0.74	-0.4
2,747,808	+		GFF2722	0.78	-2.2
2,747,808	+		GFF2722	0.78	-0.3
2,747,808	+		GFF2722	0.78	-1.7
2,747,814	+		GFF2722	0.78	+0.3
2,747,816	-		GFF2722	0.79	+1.0
2,747,818	+		GFF2722	0.79	-0.6
2,747,818	+		GFF2722	0.79	-0.9
2,747,818	+		GFF2722	0.79	+0.5
2,747,826	-		GFF2722	0.80	-0.3
2,747,826	-		GFF2722	0.80	+0.1
2,747,836	+		GFF2722	0.81	-1.1
2,747,836	+		GFF2722	0.81	-0.2
2,747,849	-		GFF2722	0.82	-0.2
2,747,857	+		GFF2722	0.83	-1.7
2,747,860	-		GFF2722	0.83	+0.6
2,747,864	+		GFF2722	0.83	-0.7
2,747,903	+		GFF2722	0.87	-1.0
2,747,908	+		GFF2722	0.88	+0.6
2,747,911	-		GFF2722	0.88	-0.2
2,747,911	-		GFF2722	0.88	-0.8
2,747,913	+		GFF2722	0.88	-0.6
2,747,916	-		GFF2722	0.88	-0.7
2,747,916	-		GFF2722	0.88	-0.1
2,747,926	-		GFF2722	0.89	+0.4
2,747,945	+				-1.7
2,747,952	-				-1.0
2,747,961	+				-1.6
2,747,966	+				+0.5
2,747,993	+				+0.5
2,747,999	-				-0.1
2,748,003	+				+1.4
2,748,003	+				+0.9
2,748,011	-				-1.8
2,748,025	-				-0.6
2,748,027	+				-1.1
2,748,027	+				+0.7
2,748,035	-				+0.9
2,748,035	-				-0.6
2,748,035	-				-0.7
2,748,050	+				+0.2
2,748,050	+				+0.2
2,748,050	+				-1.5
2,748,056	+				+0.1
2,748,056	+				-1.8
2,748,058	-				-0.9
2,748,058	-				-0.7
2,748,058	-				-0.6
2,748,059	-				+1.2
2,748,064	-				-0.5
2,748,073	+				-0.2
2,748,073	+				-0.3
2,748,073	+				-0.6
2,748,073	+				-0.3
2,748,073	+				+0.5
2,748,073	+				+0.3
2,748,073	+				-0.3
2,748,073	+				-1.3
2,748,073	+				-2.5
2,748,073	+				-0.1
2,748,073	+				-1.6
2,748,073	+				-1.1
2,748,073	+				-0.1
2,748,073	+				-0.4
2,748,073	+				-0.1
2,748,073	+				-1.2
2,748,073	+				-1.1
2,748,073	+				+0.3
2,748,073	+				+0.5
2,748,073	+				-0.8
2,748,073	+				+0.1
2,748,073	+				-0.8
2,748,081	-				-2.0
2,748,081	-				-0.3
2,748,081	-				+0.6
2,748,081	-				-0.5
2,748,081	-				-0.4
2,748,081	-				+1.2
2,748,081	-				+0.7
2,748,081	-				-1.4
2,748,081	-				-0.5
2,748,081	-				-0.3
2,748,081	-				-0.3
2,748,081	-				-0.5
2,748,081	-				+0.2
2,748,081	-				+0.2
2,748,081	-				+1.2
2,748,081	-				-0.3
2,748,081	-				-0.1
2,748,081	-				+0.8
2,748,081	-				+0.7
2,748,081	-				+0.5
2,748,081	-				+0.1
2,748,081	-				-0.4
2,748,081	-				+0.2
2,748,081	-				-1.3
2,748,097	+				+1.0
2,748,101	+		GFF2723	0.10	-0.8
2,748,105	-		GFF2723	0.11	+0.2
2,748,109	-		GFF2723	0.12	-0.9
2,748,142	+		GFF2723	0.17	-0.5
2,748,143	+		GFF2723	0.17	+0.8
2,748,147	+		GFF2723	0.17	-0.4
2,748,151	-		GFF2723	0.18	-0.8
2,748,151	-		GFF2723	0.18	-0.4
2,748,151	-		GFF2723	0.18	-0.5
2,748,155	-		GFF2723	0.18	+0.3
2,748,168	+		GFF2723	0.20	+0.3
2,748,169	+		GFF2723	0.21	+0.4
2,748,176	-		GFF2723	0.22	-1.4
2,748,177	-		GFF2723	0.22	-1.4
2,748,189	-		GFF2723	0.23	+0.3
2,748,198	+		GFF2723	0.25	-0.6
2,748,208	+		GFF2723	0.26	+0.3
2,748,216	-		GFF2723	0.27	-0.2
2,748,239	+		GFF2723	0.31	+1.4
2,748,250	+		GFF2723	0.32	+0.4
2,748,250	+		GFF2723	0.32	-0.6
2,748,267	+		GFF2723	0.35	-1.0
2,748,267	+		GFF2723	0.35	+0.5
2,748,267	+		GFF2723	0.35	-0.3
2,748,267	+		GFF2723	0.35	-1.1
2,748,267	+		GFF2723	0.35	-0.9
2,748,267	+		GFF2723	0.35	-0.1
2,748,267	+		GFF2723	0.35	+0.2
2,748,268	-		GFF2723	0.35	-0.3
2,748,272	+		GFF2723	0.36	+1.2
2,748,274	+		GFF2723	0.36	-0.4
2,748,275	-		GFF2723	0.36	+0.1
2,748,275	-		GFF2723	0.36	+0.7
2,748,275	-		GFF2723	0.36	+0.4
2,748,275	-		GFF2723	0.36	-0.7
2,748,280	-		GFF2723	0.37	-1.0
2,748,280	-		GFF2723	0.37	-0.5
2,748,280	-		GFF2723	0.37	-1.6
2,748,284	+		GFF2723	0.37	+1.0
2,748,284	+		GFF2723	0.37	-1.6
2,748,284	+		GFF2723	0.37	+0.7
2,748,284	+		GFF2723	0.37	-0.1
2,748,284	+		GFF2723	0.37	+1.2
2,748,285	-		GFF2723	0.38	+1.7
2,748,286	+		GFF2723	0.38	-1.1
2,748,286	+		GFF2723	0.38	+0.6
2,748,286	+		GFF2723	0.38	+0.2
2,748,286	+		GFF2723	0.38	-0.8
2,748,286	+		GFF2723	0.38	-0.4
2,748,286	+		GFF2723	0.38	-0.5
2,748,286	+		GFF2723	0.38	+0.3
2,748,286	+		GFF2723	0.38	-1.0
2,748,292	-		GFF2723	0.39	-0.8
2,748,292	-		GFF2723	0.39	-1.3
2,748,292	-		GFF2723	0.39	-1.8
2,748,294	-		GFF2723	0.39	-2.0
2,748,294	-		GFF2723	0.39	-0.6
2,748,294	-		GFF2723	0.39	-1.6
2,748,294	-		GFF2723	0.39	+1.4
2,748,294	-		GFF2723	0.39	-0.6
2,748,294	-		GFF2723	0.39	+0.7
2,748,294	-		GFF2723	0.39	-1.8
2,748,294	-		GFF2723	0.39	-0.2
2,748,294	-		GFF2723	0.39	-0.2
2,748,294	-		GFF2723	0.39	-1.8
2,748,319	-		GFF2723	0.43	+0.4
2,748,319	-		GFF2723	0.43	+0.3
2,748,346	-		GFF2723	0.47	+0.2
2,748,347	+		GFF2723	0.47	-0.7
2,748,347	+		GFF2723	0.47	+1.3
2,748,347	+		GFF2723	0.47	+0.5
2,748,347	+		GFF2723	0.47	-1.9
2,748,347	+		GFF2723	0.47	-2.2
2,748,347	+		GFF2723	0.47	-1.1
2,748,347	+		GFF2723	0.47	-0.3
2,748,355	-		GFF2723	0.48	-2.0
2,748,355	-		GFF2723	0.48	+0.5
2,748,355	-		GFF2723	0.48	-2.0
2,748,355	-		GFF2723	0.48	-1.3
2,748,355	-		GFF2723	0.48	-1.0
2,748,355	-		GFF2723	0.48	+0.6
2,748,355	-		GFF2723	0.48	-1.3
2,748,355	-		GFF2723	0.48	-0.8
2,748,355	-		GFF2723	0.48	-0.3
2,748,355	-		GFF2723	0.48	-0.6
2,748,355	-		GFF2723	0.48	-0.7
2,748,355	-		GFF2723	0.48	-0.6
2,748,355	-		GFF2723	0.48	-1.2
2,748,357	+		GFF2723	0.48	-0.1
2,748,363	-		GFF2723	0.49	+0.0
2,748,365	-		GFF2723	0.49	+1.1
2,748,372	+		GFF2723	0.50	+0.9
2,748,380	-		GFF2723	0.52	-1.5
2,748,448	-		GFF2723	0.62	-0.1
2,748,472	+		GFF2723	0.65	-1.5
2,748,472	+		GFF2723	0.65	-0.3
2,748,472	+		GFF2723	0.65	+0.3
2,748,472	+		GFF2723	0.65	+0.4
2,748,472	+		GFF2723	0.65	-0.2
2,748,472	+		GFF2723	0.65	-0.6
2,748,472	+		GFF2723	0.65	-1.0
2,748,472	+		GFF2723	0.65	-1.3
2,748,472	+		GFF2723	0.65	-1.7
2,748,472	+		GFF2723	0.65	-0.1
2,748,472	+		GFF2723	0.65	-1.3
2,748,472	+		GFF2723	0.65	-1.1
2,748,477	+		GFF2723	0.66	-0.8
2,748,480	-		GFF2723	0.66	-0.3
2,748,480	-		GFF2723	0.66	-0.6
2,748,480	-		GFF2723	0.66	-0.7
2,748,480	-		GFF2723	0.66	-0.9
2,748,480	-		GFF2723	0.66	-2.1
2,748,480	-		GFF2723	0.66	+1.2
2,748,480	-		GFF2723	0.66	+0.2
2,748,480	-		GFF2723	0.66	-0.7
2,748,480	-		GFF2723	0.66	-1.0
2,748,480	-		GFF2723	0.66	+1.3
2,748,480	-		GFF2723	0.66	-1.1
2,748,480	-		GFF2723	0.66	-1.7
2,748,480	-		GFF2723	0.66	-0.9
2,748,480	-		GFF2723	0.66	-1.6
2,748,480	-		GFF2723	0.66	+0.7
2,748,480	-		GFF2723	0.66	-0.3
2,748,480	-		GFF2723	0.66	-1.7
2,748,480	-		GFF2723	0.66	+0.4
2,748,480	-		GFF2723	0.66	-1.1
2,748,480	-		GFF2723	0.66	+0.1
2,748,492	+		GFF2723	0.68	-2.4
2,748,492	+		GFF2723	0.68	+1.0
2,748,505	-		GFF2723	0.70	-1.1
2,748,521	+		GFF2723	0.72	-1.6
2,748,529	-		GFF2723	0.74	-1.5
2,748,538	+		GFF2723	0.75	+0.8
2,748,546	-		GFF2723	0.76	-0.7
2,748,548	+		GFF2723	0.76	-0.2
2,748,567	-		GFF2723	0.79	-1.3
2,748,578	+		GFF2723	0.81	+1.4
2,748,578	-		GFF2723	0.81	+0.3
2,748,596	-		GFF2723	0.83	-0.1
2,748,604	-		GFF2723	0.85	-1.3
2,748,609	-		GFF2723	0.85	+0.9
2,748,614	-		GFF2723	0.86	-1.8
2,748,614	-		GFF2723	0.86	-0.5
2,748,614	-		GFF2723	0.86	-1.4
2,748,664	+				+1.1
2,748,703	+				-0.6
2,748,703	+				-0.3
2,748,703	+				-0.1
2,748,711	-				+0.5
2,748,711	-				-0.2
2,748,713	+				-0.3
2,748,713	+				-0.5
2,748,713	+				+0.2
2,748,713	+				+0.0
2,748,721	-				-1.3
2,748,721	-				+0.1
2,748,777	-		GFF2724	0.21	-0.6
2,748,784	+		GFF2724	0.24	+0.4
2,748,784	+		GFF2724	0.24	+0.5
2,748,792	-		GFF2724	0.27	-0.2
2,748,792	-		GFF2724	0.27	-0.3
2,748,806	+		GFF2724	0.33	-0.8
2,748,814	-		GFF2724	0.36	-0.9
2,748,816	-		GFF2724	0.37	-0.3
2,748,832	-		GFF2724	0.44	+0.2
2,748,834	+		GFF2724	0.44	+0.2
2,748,834	+		GFF2724	0.44	-2.3
2,748,838	-		GFF2724	0.46	-0.3
2,748,842	-		GFF2724	0.48	+0.1
2,748,842	-		GFF2724	0.48	-1.8
2,748,842	-		GFF2724	0.48	-1.5
2,748,842	-		GFF2724	0.48	+1.4
2,748,842	-		GFF2724	0.48	-0.8
2,748,842	-		GFF2724	0.48	+0.9
2,748,857	+		GFF2724	0.54	+0.4
2,748,859	+		GFF2724	0.55	-0.9
2,748,892	+		GFF2724	0.68	-0.6
2,748,892	+		GFF2724	0.68	-0.2
2,748,892	+		GFF2724	0.68	-1.0
2,748,892	+		GFF2724	0.68	+1.2
2,748,892	+		GFF2724	0.68	-0.3
2,748,895	-		GFF2724	0.70	+1.4
2,748,900	-		GFF2724	0.72	+1.0
2,748,900	-		GFF2724	0.72	+1.1
2,748,900	-		GFF2724	0.72	+0.2
2,748,900	-		GFF2724	0.72	-1.3
2,748,900	-		GFF2724	0.72	+1.4
2,748,900	-		GFF2724	0.72	+0.3
2,748,900	-		GFF2724	0.72	+0.5
2,748,900	-		GFF2724	0.72	-1.4
2,748,900	-		GFF2724	0.72	+1.5
2,748,900	-		GFF2724	0.72	-1.3
2,748,902	+		GFF2724	0.72	-0.6
2,748,905	-		GFF2724	0.74	-1.9
2,748,907	+		GFF2724	0.74	-2.2
2,748,907	+		GFF2724	0.74	-1.3
2,748,907	+		GFF2724	0.74	-2.5
2,748,907	+		GFF2724	0.74	+0.3
2,748,907	+		GFF2724	0.74	-0.3
2,748,907	+		GFF2724	0.74	-0.9
2,748,907	+		GFF2724	0.74	+0.8
2,748,907	+		GFF2724	0.74	-1.4
2,748,907	+		GFF2724	0.74	+0.1
2,748,907	+		GFF2724	0.74	-0.5
2,748,907	+		GFF2724	0.74	-1.0
2,748,907	+		GFF2724	0.74	-2.0
2,748,907	+		GFF2724	0.74	+0.3
2,748,915	-		GFF2724	0.78	+0.5
2,748,915	-		GFF2724	0.78	-2.3
2,748,915	-		GFF2724	0.78	-0.3
2,748,915	-		GFF2724	0.78	+0.4
2,748,915	-		GFF2724	0.78	-0.5
2,748,915	-		GFF2724	0.78	+1.3
2,748,915	-		GFF2724	0.78	-1.9
2,748,915	-		GFF2724	0.78	-0.3
2,748,915	-		GFF2724	0.78	-1.1
2,748,915	-		GFF2724	0.78	-0.1
2,748,915	-		GFF2724	0.78	-1.1
2,748,915	-		GFF2724	0.78	+0.5
2,748,915	-		GFF2724	0.78	-0.9
2,748,915	-		GFF2724	0.78	+0.1
2,748,915	-		GFF2724	0.78	-1.6
2,748,915	-		GFF2724	0.78	-1.2
2,748,915	-		GFF2724	0.78	+0.3
2,748,930	-		GFF2724	0.84	-0.5
2,748,938	+		GFF2724	0.87	+0.5
2,748,938	-		GFF2724	0.87	-0.9
2,748,938	-		GFF2724	0.87	-1.5
2,748,938	-		GFF2724	0.87	+0.3
2,748,938	-		GFF2724	0.87	-1.7
2,748,938	-		GFF2724	0.87	+0.0
2,748,938	-		GFF2724	0.87	-0.2
2,748,938	-		GFF2724	0.87	+0.5
2,748,939	+		GFF2724	0.88	-0.7
2,748,944	+				+0.3
2,748,944	+				+1.0
2,748,947	-				+0.3
2,748,947	-				-1.4
2,748,947	-				+0.5
2,748,952	-				+0.5
2,748,952	-				-0.4
2,748,952	-				-0.2
2,748,952	-				+0.7
2,748,952	-				-0.2
2,748,979	+				-0.3
2,748,981	-				-0.7
2,748,981	-				-1.6
2,748,986	+				-0.6
2,748,987	-				-1.3
2,748,989	-				+0.0
2,749,001	+				-0.3
2,749,001	+				-1.7
2,749,001	+				-0.3
2,749,001	+				-3.1
2,749,001	+				-0.5
2,749,001	+				-0.5
2,749,006	+				-0.3
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