Strain Fitness in Sphingobium sp. HT1-2 around GFF2326

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,349,869	-				-0.3
2,349,929	+				-1.2
2,349,929	+				-0.7
2,349,929	+				+1.1
2,349,937	-				-2.2
2,349,937	-				-0.1
2,349,937	-				-0.5
2,349,939	+				-0.2
2,349,945	-				-0.9
2,349,947	-				+1.4
2,349,962	-				-0.3
2,350,013	-		GFF2325	0.11	+0.2
2,350,020	-		GFF2325	0.12	-0.9
2,350,021	+		GFF2325	0.12	-1.3
2,350,021	+		GFF2325	0.12	-0.6
2,350,021	+		GFF2325	0.12	+0.7
2,350,021	+		GFF2325	0.12	+0.5
2,350,021	+		GFF2325	0.12	-0.6
2,350,027	-		GFF2325	0.12	+0.0
2,350,029	+		GFF2325	0.12	+0.4
2,350,029	-		GFF2325	0.12	+0.1
2,350,029	-		GFF2325	0.12	+0.3
2,350,029	-		GFF2325	0.12	-1.2
2,350,029	-		GFF2325	0.12	-0.0
2,350,036	+		GFF2325	0.13	+1.0
2,350,037	-		GFF2325	0.13	+1.1
2,350,040	+		GFF2325	0.14	-0.5
2,350,108	-		GFF2325	0.21	-0.6
2,350,123	+		GFF2325	0.23	-0.1
2,350,125	+		GFF2325	0.23	-1.1
2,350,140	+		GFF2325	0.24	-0.9
2,350,150	+		GFF2325	0.25	-1.7
2,350,150	+		GFF2325	0.25	-1.3
2,350,155	+		GFF2325	0.26	+0.1
2,350,158	-		GFF2325	0.26	-2.2
2,350,172	+		GFF2325	0.28	-1.3
2,350,198	+		GFF2325	0.31	-1.2
2,350,206	-		GFF2325	0.31	+1.1
2,350,206	-		GFF2325	0.31	+0.0
2,350,221	-		GFF2325	0.33	-0.2
2,350,222	+		GFF2325	0.33	+1.1
2,350,238	-		GFF2325	0.35	-0.5
2,350,238	-		GFF2325	0.35	+1.2
2,350,249	+		GFF2325	0.36	+0.6
2,350,249	+		GFF2325	0.36	-2.2
2,350,257	-		GFF2325	0.37	-1.7
2,350,257	-		GFF2325	0.37	+0.6
2,350,284	+		GFF2325	0.40	-0.2
2,350,288	+		GFF2325	0.40	-0.8
2,350,294	+		GFF2325	0.41	-1.6
2,350,296	-		GFF2325	0.41	-0.6
2,350,303	+		GFF2325	0.42	+0.3
2,350,306	-		GFF2325	0.42	-0.6
2,350,306	-		GFF2325	0.42	-0.1
2,350,306	-		GFF2325	0.42	-0.3
2,350,316	-		GFF2325	0.43	+0.5
2,350,363	-		GFF2325	0.48	-1.7
2,350,365	-		GFF2325	0.48	-0.1
2,350,379	+		GFF2325	0.50	+0.2
2,350,383	-		GFF2325	0.50	-0.3
2,350,385	+		GFF2325	0.51	-1.8
2,350,388	-		GFF2325	0.51	+1.7
2,350,393	-		GFF2325	0.51	-1.7
2,350,393	-		GFF2325	0.51	-0.4
2,350,393	-		GFF2325	0.51	-0.7
2,350,418	+		GFF2325	0.54	-1.3
2,350,418	+		GFF2325	0.54	-1.1
2,350,423	+		GFF2325	0.55	-0.7
2,350,423	+		GFF2325	0.55	+0.0
2,350,431	-		GFF2325	0.55	-0.9
2,350,431	-		GFF2325	0.55	-1.3
2,350,441	-		GFF2325	0.57	+0.3
2,350,453	-		GFF2325	0.58	-0.5
2,350,456	+		GFF2325	0.58	-0.3
2,350,485	+		GFF2325	0.61	+0.3
2,350,486	-		GFF2325	0.61	-2.1
2,350,495	-		GFF2325	0.62	-1.5
2,350,495	-		GFF2325	0.62	+0.2
2,350,498	-		GFF2325	0.63	-2.4
2,350,533	-		GFF2325	0.66	-0.1
2,350,533	-		GFF2325	0.66	-0.2
2,350,561	+		GFF2325	0.69	-1.2
2,350,568	+		GFF2325	0.70	+0.2
2,350,568	+		GFF2325	0.70	-1.8
2,350,568	+		GFF2325	0.70	+1.6
2,350,568	+		GFF2325	0.70	+0.9
2,350,568	+		GFF2325	0.70	-0.3
2,350,576	-		GFF2325	0.71	-0.0
2,350,576	-		GFF2325	0.71	+0.0
2,350,576	-		GFF2325	0.71	-1.3
2,350,576	-		GFF2325	0.71	-0.8
2,350,576	-		GFF2325	0.71	-0.2
2,350,576	-		GFF2325	0.71	-1.1
2,350,605	+		GFF2325	0.74	+0.4
2,350,606	-		GFF2325	0.74	-0.5
2,350,614	+		GFF2325	0.75	-1.3
2,350,614	-		GFF2325	0.75	-1.9
2,350,614	-		GFF2325	0.75	+1.2
2,350,616	+		GFF2325	0.75	-0.1
2,350,616	+		GFF2325	0.75	-0.7
2,350,616	+		GFF2325	0.75	-1.8
2,350,676	-		GFF2325	0.82	-0.0
2,350,677	-		GFF2325	0.82	-1.0
2,350,697	+		GFF2325	0.84	-0.9
2,350,704	+		GFF2325	0.85	+0.2
2,350,705	-		GFF2325	0.85	-1.6
2,350,712	-		GFF2325	0.85	-2.3
2,350,712	-		GFF2325	0.85	+1.0
2,350,723	+		GFF2325	0.87	+1.4
2,350,728	-		GFF2325	0.87	-0.7
2,350,760	-				-0.3
2,350,775	+				-0.0
2,350,776	+				+0.5
2,350,783	-				-0.3
2,350,787	+				+0.4
2,350,787	+				+0.7
2,350,804	-				-0.9
2,350,821	-				+0.5
2,350,824	+				+0.5
2,350,824	+				-1.0
2,350,832	-				+1.0
2,350,857	-				+0.1
2,350,862	-				-0.9
2,350,887	+				+0.3
2,350,895	-				-1.9
2,350,895	-				-1.2
2,350,895	-				-0.5
2,350,903	-				-1.3
2,350,909	+				+0.3
2,350,911	+				-0.3
2,350,919	-				-0.2
2,350,935	+				+0.1
2,350,943	-				-1.1
2,350,948	-				-0.6
2,350,950	+				-1.5
2,350,950	+				+1.7
2,350,958	-				-0.3
2,350,962	+				-0.2
2,350,962	+				+0.4
2,350,962	+				+0.4
2,350,962	+				-0.2
2,350,970	-				-1.9
2,350,970	-				-1.8
2,350,998	+				-1.0
2,350,998	+				+0.2
2,351,004	-				-0.0
2,351,006	+				-2.4
2,351,014	+				-0.7
2,351,014	+				-0.6
2,351,022	-				-1.0
2,351,031	-				+0.3
2,351,035	+				-2.0
2,351,042	+				-1.3
2,351,042	-				-0.5
2,351,043	-				-0.6
2,351,050	-				+1.7
2,351,075	+		GFF2326	0.11	-0.5
2,351,096	-		GFF2326	0.12	-0.6
2,351,121	+		GFF2326	0.14	-0.3
2,351,121	+		GFF2326	0.14	+1.4
2,351,131	+		GFF2326	0.14	+0.8
2,351,131	+		GFF2326	0.14	+0.8
2,351,139	-		GFF2326	0.14	-1.5
2,351,139	-		GFF2326	0.14	-1.9
2,351,139	-		GFF2326	0.14	-0.8
2,351,139	-		GFF2326	0.14	-0.6
2,351,153	-		GFF2326	0.15	-0.8
2,351,155	-		GFF2326	0.15	-0.5
2,351,184	-		GFF2326	0.17	+0.2
2,351,213	+		GFF2326	0.18	-0.4
2,351,213	+		GFF2326	0.18	+0.3
2,351,213	+		GFF2326	0.18	+0.5
2,351,221	-		GFF2326	0.19	-1.5
2,351,221	-		GFF2326	0.19	-0.5
2,351,221	-		GFF2326	0.19	-0.5
2,351,221	-		GFF2326	0.19	-0.3
2,351,221	-		GFF2326	0.19	-1.2
2,351,237	+		GFF2326	0.19	-2.1
2,351,238	+		GFF2326	0.19	-0.5
2,351,245	-		GFF2326	0.20	-0.4
2,351,246	-		GFF2326	0.20	+0.2
2,351,246	-		GFF2326	0.20	+0.5
2,351,255	-		GFF2326	0.20	-0.7
2,351,284	+		GFF2326	0.22	-0.5
2,351,285	+		GFF2326	0.22	+0.0
2,351,285	+		GFF2326	0.22	-1.8
2,351,293	-		GFF2326	0.22	+0.0
2,351,337	-		GFF2326	0.24	-2.0
2,351,359	+		GFF2326	0.26	-1.3
2,351,359	+		GFF2326	0.26	-0.0
2,351,359	+		GFF2326	0.26	+1.0
2,351,367	-		GFF2326	0.26	-0.0
2,351,367	-		GFF2326	0.26	-0.1
2,351,367	-		GFF2326	0.26	-0.3
2,351,367	-		GFF2326	0.26	-0.8
2,351,367	-		GFF2326	0.26	-2.0
2,351,367	-		GFF2326	0.26	-1.5
2,351,367	-		GFF2326	0.26	-1.2
2,351,369	-		GFF2326	0.26	-1.9
2,351,374	+		GFF2326	0.26	-1.6
2,351,385	+		GFF2326	0.27	+1.3
2,351,396	+		GFF2326	0.27	+1.0
2,351,396	+		GFF2326	0.27	-0.2
2,351,407	+		GFF2326	0.28	-1.5
2,351,430	+		GFF2326	0.29	-1.8
2,351,430	+		GFF2326	0.29	-1.3
2,351,431	+		GFF2326	0.29	-0.7
2,351,431	+		GFF2326	0.29	-1.0
2,351,431	+		GFF2326	0.29	-0.1
2,351,431	+		GFF2326	0.29	-1.6
2,351,436	+		GFF2326	0.29	+0.6
2,351,438	-		GFF2326	0.29	+0.1
2,351,456	-		GFF2326	0.30	-1.2
2,351,468	+		GFF2326	0.31	-0.3
2,351,471	-		GFF2326	0.31	-0.0
2,351,471	-		GFF2326	0.31	-0.3
2,351,503	+		GFF2326	0.33	-1.0
2,351,509	+		GFF2326	0.33	+0.4
2,351,509	+		GFF2326	0.33	-0.6
2,351,519	+		GFF2326	0.34	-1.3
2,351,519	+		GFF2326	0.34	-1.1
2,351,536	-		GFF2326	0.34	+0.6
2,351,538	+		GFF2326	0.34	+0.4
2,351,538	+		GFF2326	0.34	-0.3
2,351,546	-		GFF2326	0.35	-0.6
2,351,546	-		GFF2326	0.35	-0.8
2,351,559	+		GFF2326	0.36	+0.1
2,351,567	-		GFF2326	0.36	-0.9
2,351,572	-		GFF2326	0.36	-0.7
2,351,583	+		GFF2326	0.37	-1.0
2,351,583	-		GFF2326	0.37	+0.6
2,351,611	+		GFF2326	0.38	+1.2
2,351,619	-		GFF2326	0.39	-0.4
2,351,623	+		GFF2326	0.39	-0.3
2,351,623	+		GFF2326	0.39	-1.0
2,351,628	+		GFF2326	0.39	-1.0
2,351,631	-		GFF2326	0.39	-1.8
2,351,638	+		GFF2326	0.40	-1.6
2,351,641	-		GFF2326	0.40	-0.3
2,351,661	-		GFF2326	0.41	-0.7
2,351,684	-		GFF2326	0.42	-0.8
2,351,690	+		GFF2326	0.42	-0.7
2,351,719	+		GFF2326	0.44	-0.0
2,351,719	+		GFF2326	0.44	-1.3
2,351,719	+		GFF2326	0.44	-1.8
2,351,719	+		GFF2326	0.44	-1.1
2,351,719	+		GFF2326	0.44	-0.5
2,351,719	+		GFF2326	0.44	-0.8
2,351,719	+		GFF2326	0.44	-0.8
2,351,727	-		GFF2326	0.44	-1.5
2,351,745	+		GFF2326	0.45	+1.0
2,351,753	-		GFF2326	0.45	-1.1
2,351,757	+		GFF2326	0.45	+0.6
2,351,766	+		GFF2326	0.46	+0.7
2,351,885	+		GFF2326	0.52	-0.3
2,351,897	+		GFF2326	0.53	-1.5
2,351,897	+		GFF2326	0.53	-1.5
2,351,897	+		GFF2326	0.53	-1.4
2,351,902	+		GFF2326	0.53	-1.1
2,351,910	-		GFF2326	0.53	-0.7
2,351,915	-		GFF2326	0.53	-0.7
2,351,915	-		GFF2326	0.53	-1.0
2,351,960	+		GFF2326	0.56	-0.9
2,351,968	-		GFF2326	0.56	-2.7
2,351,968	-		GFF2326	0.56	-2.1
2,351,973	-		GFF2326	0.56	-0.9
2,351,975	-		GFF2326	0.56	-0.6
2,351,983	+		GFF2326	0.57	-0.8
2,351,983	+		GFF2326	0.57	-0.8
2,352,014	+		GFF2326	0.58	-0.6
2,352,016	-		GFF2326	0.58	-2.0
2,352,018	-		GFF2326	0.59	+0.3
2,352,023	-		GFF2326	0.59	-1.8
2,352,028	-		GFF2326	0.59	+0.4
2,352,034	+		GFF2326	0.59	-0.6
2,352,055	+		GFF2326	0.60	-1.3
2,352,069	+		GFF2326	0.61	-1.2
2,352,069	+		GFF2326	0.61	+0.5
2,352,104	-		GFF2326	0.63	-1.4
2,352,113	+		GFF2326	0.63	-0.0
2,352,121	-		GFF2326	0.64	-1.5
2,352,127	+		GFF2326	0.64	-0.7
2,352,145	-		GFF2326	0.65	-1.2
2,352,152	+		GFF2326	0.65	-0.2
2,352,155	-		GFF2326	0.65	-0.7
2,352,156	+		GFF2326	0.66	-0.7
2,352,156	+		GFF2326	0.66	-0.5
2,352,160	-		GFF2326	0.66	-1.8
2,352,160	-		GFF2326	0.66	-0.3
2,352,198	-		GFF2326	0.68	-0.3
2,352,205	+		GFF2326	0.68	+0.1
2,352,239	+		GFF2326	0.70	-0.5
2,352,244	+		GFF2326	0.70	+0.5
2,352,244	+		GFF2326	0.70	-0.1
2,352,247	-		GFF2326	0.70	-0.3
2,352,293	-		GFF2326	0.72	-1.1
2,352,296	+		GFF2326	0.73	-0.9
2,352,307	-		GFF2326	0.73	-2.4
2,352,307	-		GFF2326	0.73	+0.5
2,352,350	+		GFF2326	0.75	+1.0
2,352,360	+		GFF2326	0.76	-1.7
2,352,360	+		GFF2326	0.76	-2.7
2,352,360	+		GFF2326	0.76	-0.8
2,352,368	-		GFF2326	0.76	+0.5
2,352,376	+		GFF2326	0.77	-2.0
2,352,424	-		GFF2326	0.79	-1.0
2,352,424	-		GFF2326	0.79	+0.5
2,352,431	+		GFF2326	0.79	-0.2
2,352,431	+		GFF2326	0.79	-0.3
2,352,446	-		GFF2326	0.80	+1.1
2,352,454	+		GFF2326	0.80	-1.4
2,352,462	-		GFF2326	0.81	-1.6
2,352,462	-		GFF2326	0.81	-1.2
2,352,488	+		GFF2326	0.82	-1.0
2,352,496	-		GFF2326	0.83	+0.5
2,352,501	-		GFF2326	0.83	-0.5
2,352,503	+		GFF2326	0.83	-1.5
2,352,508	+		GFF2326	0.83	-1.8
2,352,508	+		GFF2326	0.83	-0.8
2,352,516	-		GFF2326	0.84	+1.0
2,352,516	-		GFF2326	0.84	+0.2
2,352,516	-		GFF2326	0.84	-1.3
2,352,521	-		GFF2326	0.84	-1.1
2,352,521	-		GFF2326	0.84	-0.3
2,352,546	+		GFF2326	0.85	-1.9
2,352,555	+		GFF2326	0.86	-0.5
2,352,555	+		GFF2326	0.86	-0.5
2,352,563	-		GFF2326	0.86	-1.6
2,352,563	-		GFF2326	0.86	-1.9
2,352,625	+		GFF2326	0.89	-0.1
2,352,625	+		GFF2326	0.89	+0.1
2,352,629	+		GFF2326	0.89	-0.7
2,352,632	-		GFF2326	0.89	+0.3
2,352,633	-		GFF2326	0.89	-1.0
2,352,633	-		GFF2326	0.89	-1.9
2,352,654	+				-1.0
2,352,654	+				+0.7
2,352,659	+				+0.8
2,352,662	-				+0.2
2,352,667	-				-0.6
2,352,667	-				-2.8
2,352,669	-				-0.3
2,352,680	+				-0.3
2,352,680	+				-0.7
2,352,688	-				+0.1
2,352,688	-				-1.5
2,352,690	+				+0.9
2,352,699	+				-1.3
2,352,735	+				+0.2
2,352,735	+				-1.4
2,352,743	-				-0.3
2,352,743	-				+0.4
2,352,753	-				+0.8
2,352,759	+				-0.3
2,352,759	+				-0.8
2,352,759	+				-1.3
2,352,759	+				+0.3
2,352,767	+				+0.5
2,352,779	+				-1.8
2,352,784	+				-0.5
2,352,787	-				-0.5
2,352,790	-				-1.6
2,352,792	-				-1.8
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2,352,822	-				-1.4
2,352,824	+				-0.3
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2,352,852	-				-1.7
2,352,865	+				-0.5
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2,352,873	-				+1.5
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2,352,933	+				+1.1
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2,352,945	-				+0.5
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2,352,955	-				+0.2
2,352,955	-				-0.8
2,352,979	+				+1.1
2,352,981	+				-1.5
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2,352,989	-				-1.0
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2,352,989	-				+0.3
2,352,989	-				+0.0
2,352,989	-				+1.1
2,352,989	-				-1.2
2,352,989	-				-0.4
2,352,989	-				+0.6