Strain Fitness in Sphingobium sp. HT1-2 around GFF2182

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,198,350	-		GFF2181	0.61	-0.2
2,198,355	+		GFF2181	0.62	+1.4
2,198,355	+		GFF2181	0.62	-1.3
2,198,355	-		GFF2181	0.62	+0.5
2,198,363	-		GFF2181	0.62	+1.0
2,198,376	+		GFF2181	0.63	-1.5
2,198,405	-		GFF2181	0.65	-1.1
2,198,418	-		GFF2181	0.65	-0.6
2,198,429	-		GFF2181	0.66	-2.0
2,198,449	-		GFF2181	0.67	+0.0
2,198,453	+		GFF2181	0.68	-0.1
2,198,459	+		GFF2181	0.68	-1.1
2,198,459	+		GFF2181	0.68	-0.7
2,198,459	+		GFF2181	0.68	-1.0
2,198,467	-		GFF2181	0.68	-0.4
2,198,467	-		GFF2181	0.68	-0.4
2,198,469	-		GFF2181	0.68	-1.4
2,198,488	-		GFF2181	0.70	-1.4
2,198,494	+		GFF2181	0.70	+0.8
2,198,499	+		GFF2181	0.70	+0.3
2,198,499	+		GFF2181	0.70	+0.6
2,198,512	+		GFF2181	0.71	+0.5
2,198,512	+		GFF2181	0.71	+0.1
2,198,528	-		GFF2181	0.72	-1.5
2,198,544	+		GFF2181	0.73	-0.6
2,198,552	-		GFF2181	0.73	-1.9
2,198,554	+		GFF2181	0.74	-1.1
2,198,562	-		GFF2181	0.74	-0.7
2,198,562	-		GFF2181	0.74	+0.7
2,198,567	-		GFF2181	0.74	-0.1
2,198,567	-		GFF2181	0.74	-1.3
2,198,567	-		GFF2181	0.74	+0.1
2,198,589	+		GFF2181	0.76	-1.4
2,198,601	+		GFF2181	0.76	-0.1
2,198,601	+		GFF2181	0.76	+0.1
2,198,601	+		GFF2181	0.76	-1.1
2,198,606	+		GFF2181	0.77	-0.9
2,198,629	-		GFF2181	0.78	-1.5
2,198,644	-		GFF2181	0.79	-0.3
2,198,696	-		GFF2181	0.82	+0.6
2,198,701	+		GFF2181	0.82	-0.2
2,198,717	-		GFF2181	0.83	-1.5
2,198,749	+		GFF2181	0.85	-1.0
2,198,749	+		GFF2181	0.85	+0.2
2,198,749	+		GFF2181	0.85	-0.4
2,198,801	+		GFF2181	0.89	-1.7
2,198,863	-				-1.8
2,198,872	+				-1.1
2,198,875	-				-1.8
2,198,875	-				-0.8
2,198,891	+				+0.7
2,198,914	+				-1.9
2,198,914	+				+0.8
2,198,914	+				-1.6
2,198,914	+				+0.2
2,198,914	+				-1.5
2,198,914	+				+0.0
2,198,914	+				-0.8
2,198,914	+				-2.1
2,198,914	+				-1.8
2,198,914	+				+0.3
2,198,922	-				-0.1
2,198,922	-				-1.0
2,198,922	-				-0.5
2,198,922	-				-0.7
2,198,922	-				-0.1
2,198,922	-				+1.4
2,198,922	-				+0.0
2,198,922	-				-0.1
2,198,943	-				-0.8
2,198,944	+				+0.5
2,198,952	-				-0.5
2,198,957	-				-1.9
2,198,969	+				-1.9
2,198,997	-				+1.6
2,198,999	-				-0.4
2,199,000	+				-0.3
2,199,000	+				+0.3
2,199,008	-				-0.9
2,199,018	+				-0.5
2,199,026	-				-1.1
2,199,034	-				+0.6
2,199,034	-				-0.5
2,199,047	+				+1.0
2,199,047	+				-0.6
2,199,047	+				+0.6
2,199,055	-				-1.1
2,199,072	+				-0.7
2,199,072	+				-0.5
2,199,072	+				+0.2
2,199,072	+				+0.2
2,199,072	+				+0.3
2,199,080	-				-0.5
2,199,080	-				-0.4
2,199,080	-				-0.1
2,199,080	-				+0.3
2,199,085	+				+0.0
2,199,085	+				-0.4
2,199,093	-				-0.2
2,199,094	+				-0.9
2,199,133	-				+2.3
2,199,135	-				-1.0
2,199,164	+				-1.6
2,199,188	+				-0.9
2,199,193	-				-0.8
2,199,205	+				-1.1
2,199,205	+				-0.7
2,199,213	-				-0.8
2,199,246	+				-0.7
2,199,246	+				-1.2
2,199,254	-				-0.9
2,199,265	+				-0.1
2,199,273	+				-0.7
2,199,274	+				-0.4
2,199,282	+				-1.0
2,199,285	-				+0.8
2,199,304	+				+1.2
2,199,306	+				-0.1
2,199,306	+				+0.2
2,199,306	+				+0.8
2,199,312	-				-0.4
2,199,314	-				-0.7
2,199,325	+				-1.5
2,199,325	+				+0.5
2,199,327	+				-0.1
2,199,327	+				-0.2
2,199,333	+				-0.4
2,199,351	-				+0.4
2,199,371	-				+1.2
2,199,381	-				+0.0
2,199,437	-		GFF2182	0.12	+0.2
2,199,447	+		GFF2182	0.14	-0.7
2,199,447	+		GFF2182	0.14	-1.3
2,199,447	+		GFF2182	0.14	+0.0
2,199,450	-		GFF2182	0.14	-0.8
2,199,455	-		GFF2182	0.14	-2.7
2,199,455	-		GFF2182	0.14	-0.1
2,199,455	-		GFF2182	0.14	-0.7
2,199,493	-		GFF2182	0.19	+0.5
2,199,512	-		GFF2182	0.21	-0.6
2,199,520	-		GFF2182	0.22	+0.9
2,199,531	+		GFF2182	0.24	+1.3
2,199,539	-		GFF2182	0.25	+0.3
2,199,563	+		GFF2182	0.28	-1.1
2,199,565	-		GFF2182	0.28	-1.1
2,199,584	-		GFF2182	0.30	+0.3
2,199,604	+		GFF2182	0.32	-0.8
2,199,635	+		GFF2182	0.36	-2.4
2,199,670	-		GFF2182	0.40	-0.6
2,199,675	-		GFF2182	0.41	-1.3
2,199,681	+		GFF2182	0.42	+0.9
2,199,681	+		GFF2182	0.42	+0.4
2,199,681	+		GFF2182	0.42	-0.4
2,199,689	-		GFF2182	0.43	-0.5
2,199,689	-		GFF2182	0.43	-0.6
2,199,689	-		GFF2182	0.43	+0.3
2,199,689	-		GFF2182	0.43	+0.3
2,199,689	-		GFF2182	0.43	-0.1
2,199,689	-		GFF2182	0.43	-0.2
2,199,712	-		GFF2182	0.46	+0.3
2,199,722	+		GFF2182	0.47	-0.8
2,199,722	+		GFF2182	0.47	+1.2
2,199,722	+		GFF2182	0.47	-1.0
2,199,725	-		GFF2182	0.47	+0.1
2,199,725	-		GFF2182	0.47	+0.5
2,199,725	-		GFF2182	0.47	-0.7
2,199,725	-		GFF2182	0.47	-0.5
2,199,730	+		GFF2182	0.48	-1.2
2,199,730	-		GFF2182	0.48	+0.4
2,199,732	-		GFF2182	0.48	+0.6
2,199,738	-		GFF2182	0.49	-0.4
2,199,738	-		GFF2182	0.49	-0.5
2,199,738	-		GFF2182	0.49	-0.4
2,199,740	+		GFF2182	0.49	+0.2
2,199,766	+		GFF2182	0.52	-1.0
2,199,772	+		GFF2182	0.53	-1.0
2,199,778	+		GFF2182	0.54	+0.2
2,199,782	-		GFF2182	0.54	+0.6
2,199,782	-		GFF2182	0.54	+0.1
2,199,788	+		GFF2182	0.55	+0.7
2,199,822	-		GFF2182	0.59	-0.0
2,199,827	-		GFF2182	0.59	-0.5
2,199,836	+		GFF2182	0.61	-1.2
2,199,844	-		GFF2182	0.61	-1.2
2,199,844	-		GFF2182	0.61	-0.1
2,199,844	-		GFF2182	0.61	-0.3
2,199,868	+		GFF2182	0.64	-0.1
2,199,876	-		GFF2182	0.65	-1.3
2,199,876	-		GFF2182	0.65	-1.6
2,199,879	+		GFF2182	0.66	+0.3
2,199,884	+		GFF2182	0.66	-1.5
2,199,887	-		GFF2182	0.67	-1.7
2,199,889	+		GFF2182	0.67	+0.1
2,199,897	-		GFF2182	0.68	+0.1
2,199,897	-		GFF2182	0.68	-0.9
2,199,907	+		GFF2182	0.69	+0.0
2,199,932	+		GFF2182	0.72	-0.1
2,199,932	+		GFF2182	0.72	+0.6
2,199,932	+		GFF2182	0.72	+0.8
2,199,932	+		GFF2182	0.72	+0.6
2,199,932	+		GFF2182	0.72	+0.0
2,199,932	+		GFF2182	0.72	-2.2
2,199,932	+		GFF2182	0.72	-2.3
2,199,932	+		GFF2182	0.72	-0.9
2,199,932	+		GFF2182	0.72	-0.2
2,199,932	+		GFF2182	0.72	+0.2
2,199,932	+		GFF2182	0.72	-1.3
2,199,932	+		GFF2182	0.72	+0.2
2,199,932	+		GFF2182	0.72	+0.3
2,199,932	+		GFF2182	0.72	-2.0
2,199,932	+		GFF2182	0.72	-0.7
2,199,932	+		GFF2182	0.72	+0.8
2,199,932	+		GFF2182	0.72	+0.5
2,199,932	+		GFF2182	0.72	-0.7
2,199,932	+		GFF2182	0.72	-0.8
2,199,932	+		GFF2182	0.72	-1.5
2,199,932	+		GFF2182	0.72	-0.4
2,199,940	-		GFF2182	0.73	-1.4
2,199,940	-		GFF2182	0.73	-1.4
2,199,940	-		GFF2182	0.73	-1.8
2,199,940	-		GFF2182	0.73	-3.5
2,199,940	-		GFF2182	0.73	+0.9
2,199,940	-		GFF2182	0.73	+1.1
2,199,940	-		GFF2182	0.73	+1.0
2,199,940	-		GFF2182	0.73	+1.2
2,199,940	-		GFF2182	0.73	+0.3
2,199,940	-		GFF2182	0.73	-1.1
2,199,940	-		GFF2182	0.73	-1.6
2,199,940	-		GFF2182	0.73	-1.2
2,199,940	-		GFF2182	0.73	-0.0
2,199,940	-		GFF2182	0.73	+0.3
2,199,940	-		GFF2182	0.73	-0.1
2,199,940	-		GFF2182	0.73	-1.0
2,199,940	-		GFF2182	0.73	+0.8
2,199,945	-		GFF2182	0.74	-1.2
2,199,977	-		GFF2182	0.78	-1.0
2,199,980	+		GFF2182	0.78	+0.2
2,199,981	+		GFF2182	0.78	-0.4
2,199,982	-		GFF2182	0.78	-0.5
2,199,988	+		GFF2182	0.79	-0.6
2,199,999	+		GFF2182	0.80	-1.4
2,200,011	-		GFF2182	0.82	-1.1
2,200,037	+		GFF2182	0.85	-0.9
2,200,059	+		GFF2182	0.87	-0.3
2,200,059	+		GFF2182	0.87	-0.4
2,200,067	-		GFF2182	0.88	+0.7
2,200,112	+				-0.5
2,200,112	+				+0.3
2,200,112	+				+0.9
2,200,112	+				-0.3
2,200,112	+				-1.1
2,200,119	-				-0.9
2,200,120	-				+1.5
2,200,120	-				-0.3
2,200,120	-				-0.4
2,200,120	-				-1.2
2,200,120	-				-2.4
2,200,120	-				-0.8
2,200,120	-				+0.1
2,200,131	+				-1.1
2,200,134	-				-0.2
2,200,134	-				-1.2
2,200,136	+				+1.7
2,200,139	-				-1.1
2,200,147	+				+0.6
2,200,155	-				-0.7
2,200,155	-				-0.6
2,200,155	-				+0.0
2,200,180	+				-0.6
2,200,180	+				-0.2
2,200,180	+				-0.0
2,200,180	+				-1.5
2,200,188	-				-0.7
2,200,188	-				-1.2
2,200,208	+				-0.8
2,200,215	+				+0.5
2,200,222	-				+0.6
2,200,241	+				+0.5
2,200,244	+				-1.7
2,200,244	+				+0.1
2,200,252	-				-1.0
2,200,252	-				-0.9
2,200,263	+				+0.9
2,200,263	+				-0.3
2,200,271	-		GFF2183	0.10	-1.0
2,200,271	-		GFF2183	0.10	-1.3
2,200,276	-		GFF2183	0.11	-0.8
2,200,288	+		GFF2183	0.12	-0.7
2,200,305	+		GFF2183	0.14	-0.2
2,200,325	+		GFF2183	0.16	-0.5
2,200,325	+		GFF2183	0.16	-1.1
2,200,332	-		GFF2183	0.16	-1.1
2,200,332	-		GFF2183	0.16	+0.3
2,200,333	-		GFF2183	0.16	-0.1
2,200,358	+		GFF2183	0.19	+0.1
2,200,366	-		GFF2183	0.19	-0.9
2,200,366	-		GFF2183	0.19	-1.5
2,200,367	-		GFF2183	0.20	-0.3
2,200,376	+		GFF2183	0.20	+0.7
2,200,376	+		GFF2183	0.20	+0.8
2,200,384	-		GFF2183	0.21	+0.9
2,200,393	+		GFF2183	0.22	+0.0
2,200,393	+		GFF2183	0.22	-0.1
2,200,393	+		GFF2183	0.22	-2.4
2,200,393	+		GFF2183	0.22	+0.2
2,200,401	-		GFF2183	0.23	-1.3
2,200,401	-		GFF2183	0.23	+0.9
2,200,413	+		GFF2183	0.24	-0.4
2,200,440	+		GFF2183	0.27	-0.5
2,200,440	+		GFF2183	0.27	-1.7
2,200,440	+		GFF2183	0.27	+0.3
2,200,450	-		GFF2183	0.28	-0.1
2,200,458	-		GFF2183	0.28	+0.5
2,200,460	+		GFF2183	0.29	-0.6
2,200,460	+		GFF2183	0.29	+0.5
2,200,468	-		GFF2183	0.29	-1.0
2,200,476	+		GFF2183	0.30	-2.1
2,200,476	+		GFF2183	0.30	-1.0
2,200,484	-		GFF2183	0.31	-1.9
2,200,487	+		GFF2183	0.31	-0.2
2,200,494	-		GFF2183	0.32	-2.2
2,200,494	-		GFF2183	0.32	-0.6
2,200,494	-		GFF2183	0.32	+0.8
2,200,505	-		GFF2183	0.33	+0.6
2,200,505	-		GFF2183	0.33	+0.8
2,200,507	+		GFF2183	0.33	-0.5
2,200,508	+		GFF2183	0.33	-1.2
2,200,515	-		GFF2183	0.34	-0.8
2,200,515	-		GFF2183	0.34	-3.6
2,200,516	+		GFF2183	0.34	-1.9
2,200,523	-		GFF2183	0.35	+1.5
2,200,529	-		GFF2183	0.35	-0.1
2,200,569	+		GFF2183	0.39	+0.4
2,200,569	+		GFF2183	0.39	-0.8
2,200,569	+		GFF2183	0.39	-1.1
2,200,577	-		GFF2183	0.40	-1.1
2,200,577	-		GFF2183	0.40	-0.7
2,200,577	-		GFF2183	0.40	-0.4
2,200,577	-		GFF2183	0.40	-0.8
2,200,610	-		GFF2183	0.43	-0.1
2,200,624	+		GFF2183	0.44	-0.9
2,200,632	-		GFF2183	0.45	+0.4
2,200,656	+		GFF2183	0.48	+0.0
2,200,672	-		GFF2183	0.49	+0.2
2,200,694	-		GFF2183	0.51	+0.4
2,200,703	+		GFF2183	0.52	-0.3
2,200,706	+		GFF2183	0.52	-1.3
2,200,716	-		GFF2183	0.53	+0.7
2,200,716	-		GFF2183	0.53	+1.6
2,200,764	+		GFF2183	0.58	+1.0
2,200,766	-		GFF2183	0.58	+0.6
2,200,771	+		GFF2183	0.59	-2.5
2,200,772	-		GFF2183	0.59	-0.1
2,200,779	+		GFF2183	0.59	+0.6
2,200,787	-		GFF2183	0.60	-0.2
2,200,787	-		GFF2183	0.60	-0.5
2,200,787	-		GFF2183	0.60	+0.4
2,200,834	+		GFF2183	0.65	-0.3
2,200,834	-		GFF2183	0.65	-0.0
2,200,834	-		GFF2183	0.65	+0.2
2,200,836	+		GFF2183	0.65	-1.3
2,200,836	+		GFF2183	0.65	-0.4
2,200,836	+		GFF2183	0.65	+0.2
2,200,836	+		GFF2183	0.65	-1.4
2,200,836	+		GFF2183	0.65	-0.7
2,200,839	-		GFF2183	0.65	-0.1
2,200,841	+		GFF2183	0.66	+0.2
2,200,842	-		GFF2183	0.66	-1.7
2,200,844	-		GFF2183	0.66	+0.8
2,200,844	-		GFF2183	0.66	+1.1
2,200,849	-		GFF2183	0.66	+0.4
2,200,849	-		GFF2183	0.66	+0.3
2,200,852	-		GFF2183	0.67	-0.0
2,200,889	-		GFF2183	0.70	-1.5
2,200,902	+		GFF2183	0.71	+0.2
2,200,908	+		GFF2183	0.72	-0.7
2,200,908	+		GFF2183	0.72	+0.2
2,200,916	+		GFF2183	0.73	-0.9
2,200,916	-		GFF2183	0.73	-0.7
2,200,916	-		GFF2183	0.73	+0.5
2,200,916	-		GFF2183	0.73	+1.2
2,200,916	-		GFF2183	0.73	-0.1
2,200,925	+		GFF2183	0.74	+0.2
2,200,943	+		GFF2183	0.75	-1.4
2,200,943	+		GFF2183	0.75	-1.1
2,200,943	+		GFF2183	0.75	-1.3
2,200,945	+		GFF2183	0.76	-0.7
2,200,951	-		GFF2183	0.76	+0.5
2,200,951	-		GFF2183	0.76	+0.1
2,200,951	-		GFF2183	0.76	-1.4
2,200,953	-		GFF2183	0.76	-0.8
2,200,953	-		GFF2183	0.76	+1.3
2,200,968	-		GFF2183	0.78	-0.6
2,201,030	+		GFF2183	0.84	-0.5
2,201,030	+		GFF2183	0.84	-2.4
2,201,030	+		GFF2183	0.84	+1.3
2,201,030	+		GFF2183	0.84	-0.2
2,201,040	+		GFF2183	0.85	+0.2
2,201,047	+		GFF2183	0.85	-0.5
2,201,052	+		GFF2183	0.86	-0.8
2,201,052	+		GFF2183	0.86	-0.5
2,201,055	-		GFF2183	0.86	-1.0
2,201,060	-		GFF2183	0.87	+0.6
2,201,074	+		GFF2183	0.88	-1.5
2,201,074	+		GFF2183	0.88	-1.1
2,201,074	+		GFF2183	0.88	+0.8
2,201,074	+		GFF2183	0.88	+0.1
2,201,074	+		GFF2183	0.88	+1.1
2,201,074	+		GFF2183	0.88	-0.3
2,201,074	+		GFF2183	0.88	-0.9
2,201,074	+		GFF2183	0.88	+1.5
2,201,074	+		GFF2183	0.88	-1.1
2,201,079	+		GFF2183	0.89	-0.5
2,201,082	-		GFF2183	0.89	-0.7
2,201,082	-		GFF2183	0.89	+0.3
2,201,082	-		GFF2183	0.89	-0.4
2,201,082	-		GFF2183	0.89	+0.6
2,201,082	-		GFF2183	0.89	-0.5
2,201,082	-		GFF2183	0.89	-0.4
2,201,082	-		GFF2183	0.89	-0.2
2,201,082	-		GFF2183	0.89	-0.4
2,201,082	-		GFF2183	0.89	+0.7
2,201,082	-		GFF2183	0.89	+0.9
2,201,097	-				+0.2
2,201,099	+				-0.1
2,201,099	+				-0.8
2,201,107	-				-1.1
2,201,107	-				-0.8
2,201,107	-				+0.3
2,201,113	-				-1.6
2,201,113	-				-1.4
2,201,123	+				-2.0
2,201,127	-				-1.4
2,201,127	-				-0.3