Strain Fitness in Sphingobium sp. HT1-2 around GFF1937

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,961,137	+		GFF1936	0.14	-1.0
1,961,140	-		GFF1936	0.14	+0.3
1,961,140	-		GFF1936	0.14	-0.7
1,961,140	-		GFF1936	0.14	+0.1
1,961,140	-		GFF1936	0.14	+0.7
1,961,140	-		GFF1936	0.14	-1.7
1,961,145	-		GFF1936	0.15	-1.1
1,961,150	-		GFF1936	0.15	-2.1
1,961,165	-		GFF1936	0.16	-0.5
1,961,192	-		GFF1936	0.19	-0.6
1,961,220	-		GFF1936	0.21	-2.1
1,961,241	-		GFF1936	0.23	-0.8
1,961,247	+		GFF1936	0.24	-1.3
1,961,268	+		GFF1936	0.25	-0.2
1,961,270	-		GFF1936	0.26	-1.3
1,961,275	+		GFF1936	0.26	-0.4
1,961,300	+		GFF1936	0.28	+0.5
1,961,301	+		GFF1936	0.28	-0.3
1,961,336	+		GFF1936	0.31	+0.9
1,961,336	+		GFF1936	0.31	-0.1
1,961,336	+		GFF1936	0.31	-0.3
1,961,336	+		GFF1936	0.31	-1.0
1,961,344	-		GFF1936	0.32	+0.6
1,961,344	-		GFF1936	0.32	+0.9
1,961,346	-		GFF1936	0.32	-1.1
1,961,356	-		GFF1936	0.33	+1.5
1,961,360	+		GFF1936	0.33	+1.2
1,961,368	-		GFF1936	0.34	-0.2
1,961,393	+		GFF1936	0.36	+0.1
1,961,409	-		GFF1936	0.38	+0.1
1,961,417	-		GFF1936	0.38	+0.4
1,961,462	+		GFF1936	0.42	-0.4
1,961,462	+		GFF1936	0.42	-1.0
1,961,462	+		GFF1936	0.42	-1.1
1,961,469	-		GFF1936	0.43	-0.6
1,961,470	-		GFF1936	0.43	+0.9
1,961,470	-		GFF1936	0.43	+1.3
1,961,470	-		GFF1936	0.43	-1.1
1,961,472	+		GFF1936	0.43	-1.1
1,961,472	+		GFF1936	0.43	-0.1
1,961,472	+		GFF1936	0.43	-1.1
1,961,472	+		GFF1936	0.43	-0.6
1,961,480	-		GFF1936	0.44	+1.0
1,961,480	-		GFF1936	0.44	-1.3
1,961,480	-		GFF1936	0.44	+0.4
1,961,480	-		GFF1936	0.44	-0.1
1,961,480	-		GFF1936	0.44	+1.8
1,961,480	-		GFF1936	0.44	+0.0
1,961,482	+		GFF1936	0.44	-0.4
1,961,490	-		GFF1936	0.45	-1.5
1,961,492	+		GFF1936	0.45	+0.4
1,961,494	+		GFF1936	0.45	-0.4
1,961,520	-		GFF1936	0.47	+0.2
1,961,547	-		GFF1936	0.50	+0.6
1,961,561	-		GFF1936	0.51	-0.5
1,961,581	-		GFF1936	0.53	-0.6
1,961,586	-		GFF1936	0.53	-0.4
1,961,627	+		GFF1936	0.57	-2.3
1,961,642	+		GFF1936	0.58	-0.1
1,961,650	-		GFF1936	0.59	+0.7
1,961,652	-		GFF1936	0.59	+0.6
1,961,675	-		GFF1936	0.61	-0.3
1,961,677	+		GFF1936	0.61	-1.3
1,961,677	+		GFF1936	0.61	-0.5
1,961,678	-		GFF1936	0.61	-1.1
1,961,688	+		GFF1936	0.62	-1.3
1,961,690	-		GFF1936	0.62	+0.4
1,961,691	-		GFF1936	0.62	-0.1
1,961,707	+		GFF1936	0.64	-1.2
1,961,708	+		GFF1936	0.64	-0.1
1,961,719	-		GFF1936	0.65	+0.9
1,961,721	+		GFF1936	0.65	-0.1
1,961,726	+		GFF1936	0.65	+0.6
1,961,726	+		GFF1936	0.65	+1.0
1,961,734	-		GFF1936	0.66	+0.0
1,961,770	+		GFF1936	0.69	-0.4
1,961,806	+		GFF1936	0.72	+0.6
1,961,821	+		GFF1936	0.73	-1.6
1,961,822	-		GFF1936	0.74	-0.2
1,961,834	+		GFF1936	0.75	-1.3
1,961,839	+		GFF1936	0.75	-0.6
1,961,842	-		GFF1936	0.75	-1.0
1,961,842	-		GFF1936	0.75	-0.7
1,961,854	-		GFF1936	0.76	-0.8
1,961,854	-		GFF1936	0.76	-0.9
1,961,864	-		GFF1936	0.77	-1.5
1,961,868	+		GFF1936	0.78	-0.9
1,961,876	-		GFF1936	0.78	-1.5
1,961,876	-		GFF1936	0.78	-2.6
1,961,882	-		GFF1936	0.79	+0.3
1,961,901	+		GFF1936	0.80	+0.4
1,961,907	+		GFF1936	0.81	+0.3
1,961,907	+		GFF1936	0.81	-0.8
1,961,907	+		GFF1936	0.81	+0.4
1,961,907	+		GFF1936	0.81	+0.3
1,961,907	+		GFF1936	0.81	-0.4
1,961,907	+		GFF1936	0.81	+0.7
1,961,907	+		GFF1936	0.81	+0.7
1,961,907	+		GFF1936	0.81	+0.4
1,961,907	+		GFF1936	0.81	-2.6
1,961,907	+		GFF1936	0.81	+0.2
1,961,907	+		GFF1936	0.81	-0.5
1,961,907	+		GFF1936	0.81	-0.7
1,961,907	+		GFF1936	0.81	+0.2
1,961,914	+		GFF1936	0.82	-0.4
1,961,914	-		GFF1936	0.82	-0.3
1,961,915	-		GFF1936	0.82	+0.4
1,961,915	-		GFF1936	0.82	+0.6
1,961,915	-		GFF1936	0.82	-0.5
1,961,915	-		GFF1936	0.82	-0.6
1,961,915	-		GFF1936	0.82	-0.6
1,961,915	-		GFF1936	0.82	-1.2
1,961,915	-		GFF1936	0.82	-2.0
1,961,915	-		GFF1936	0.82	-1.4
1,961,915	-		GFF1936	0.82	-0.5
1,961,915	-		GFF1936	0.82	+0.5
1,961,915	-		GFF1936	0.82	-0.8
1,961,922	-		GFF1936	0.82	-0.1
1,961,962	+		GFF1936	0.86	-0.1
1,961,962	+		GFF1936	0.86	-2.2
1,961,970	-		GFF1936	0.86	-0.5
1,962,023	+				+0.1
1,962,027	+				+0.3
1,962,027	+				+0.4
1,962,033	-				+0.9
1,962,035	-				-1.8
1,962,035	-				+0.9
1,962,036	+				-1.0
1,962,076	-				-1.1
1,962,076	-				-0.7
1,962,076	-				+0.8
1,962,076	-				+0.4
1,962,076	-				+0.6
1,962,076	-				+0.0
1,962,085	+				-1.0
1,962,085	+				-1.9
1,962,086	-				+0.2
1,962,110	+				+0.4
1,962,132	+				-0.7
1,962,132	+				-0.7
1,962,153	-				+0.6
1,962,191	-				-0.6
1,962,205	-				-0.4
1,962,225	-				+1.1
1,962,238	+				+0.5
1,962,238	+				-1.9
1,962,246	-				-1.7
1,962,274	+				-1.7
1,962,275	-				+0.4
1,962,282	-				-0.9
1,962,283	-				+0.9
1,962,293	-				-0.3
1,962,325	-				+1.1
1,962,347	+		GFF1937	0.11	-0.4
1,962,355	-		GFF1937	0.11	-0.9
1,962,364	+		GFF1937	0.12	-1.5
1,962,364	+		GFF1937	0.12	-0.5
1,962,364	+		GFF1937	0.12	+0.6
1,962,364	+		GFF1937	0.12	+1.0
1,962,364	+		GFF1937	0.12	-0.5
1,962,364	+		GFF1937	0.12	-0.9
1,962,372	-		GFF1937	0.12	-0.7
1,962,372	-		GFF1937	0.12	+1.7
1,962,372	-		GFF1937	0.12	+0.0
1,962,372	-		GFF1937	0.12	-0.6
1,962,372	-		GFF1937	0.12	+1.2
1,962,372	-		GFF1937	0.12	+0.3
1,962,372	-		GFF1937	0.12	+0.3
1,962,372	-		GFF1937	0.12	-0.2
1,962,372	-		GFF1937	0.12	-1.3
1,962,372	-		GFF1937	0.12	-1.5
1,962,372	-		GFF1937	0.12	+0.2
1,962,372	-		GFF1937	0.12	+1.2
1,962,374	+		GFF1937	0.12	-2.1
1,962,377	-		GFF1937	0.12	-1.2
1,962,382	-		GFF1937	0.13	-1.5
1,962,382	-		GFF1937	0.13	-0.3
1,962,382	-		GFF1937	0.13	+1.0
1,962,391	+		GFF1937	0.13	-1.0
1,962,392	-		GFF1937	0.13	-0.8
1,962,392	-		GFF1937	0.13	+0.1
1,962,392	-		GFF1937	0.13	-2.8
1,962,399	-		GFF1937	0.14	+0.1
1,962,401	+		GFF1937	0.14	-0.9
1,962,408	-		GFF1937	0.14	-0.1
1,962,409	-		GFF1937	0.14	-0.6
1,962,463	-		GFF1937	0.17	+1.7
1,962,463	-		GFF1937	0.17	+0.6
1,962,469	-		GFF1937	0.17	+0.2
1,962,513	-		GFF1937	0.20	-0.2
1,962,556	-		GFF1937	0.22	-0.5
1,962,556	-		GFF1937	0.22	-0.6
1,962,558	+		GFF1937	0.22	-0.3
1,962,566	-		GFF1937	0.22	-1.6
1,962,573	+		GFF1937	0.23	-0.7
1,962,573	+		GFF1937	0.23	-0.3
1,962,581	-		GFF1937	0.23	+0.7
1,962,583	-		GFF1937	0.23	-1.3
1,962,600	+		GFF1937	0.24	-0.4
1,962,600	-		GFF1937	0.24	-1.5
1,962,607	+		GFF1937	0.24	-0.3
1,962,608	-		GFF1937	0.24	-0.9
1,962,628	+		GFF1937	0.26	-0.8
1,962,636	-		GFF1937	0.26	-0.1
1,962,639	+		GFF1937	0.26	-1.6
1,962,657	+		GFF1937	0.27	-0.3
1,962,664	+		GFF1937	0.27	-1.6
1,962,744	+		GFF1937	0.32	-0.1
1,962,752	+		GFF1937	0.32	-0.5
1,962,752	+		GFF1937	0.32	-0.3
1,962,752	+		GFF1937	0.32	+0.8
1,962,762	+		GFF1937	0.32	+0.8
1,962,762	+		GFF1937	0.32	-1.6
1,962,762	+		GFF1937	0.32	-2.0
1,962,762	+		GFF1937	0.32	-1.4
1,962,762	+		GFF1937	0.32	+1.0
1,962,762	+		GFF1937	0.32	+0.2
1,962,770	-		GFF1937	0.33	-0.7
1,962,794	+		GFF1937	0.34	+0.2
1,962,802	-		GFF1937	0.35	-1.1
1,962,812	-		GFF1937	0.35	-0.4
1,962,827	+		GFF1937	0.36	+0.4
1,962,842	+		GFF1937	0.37	-0.2
1,962,850	-		GFF1937	0.37	-1.0
1,962,850	-		GFF1937	0.37	-1.0
1,962,850	-		GFF1937	0.37	-1.1
1,962,850	-		GFF1937	0.37	+0.0
1,962,864	-		GFF1937	0.38	+1.2
1,962,872	+		GFF1937	0.38	-1.0
1,962,888	-		GFF1937	0.39	-1.0
1,962,888	-		GFF1937	0.39	-1.8
1,962,898	+		GFF1937	0.40	+0.3
1,962,921	+		GFF1937	0.41	-1.3
1,962,928	+		GFF1937	0.41	+0.2
1,962,928	+		GFF1937	0.41	-0.1
1,962,928	+		GFF1937	0.41	-2.1
1,962,929	-		GFF1937	0.41	+0.7
1,962,929	-		GFF1937	0.41	-0.0
1,962,936	-		GFF1937	0.41	-1.3
1,962,979	-		GFF1937	0.44	-1.1
1,963,012	+		GFF1937	0.45	+1.1
1,963,014	+		GFF1937	0.46	-0.3
1,963,066	+		GFF1937	0.48	-0.4
1,963,066	+		GFF1937	0.48	-0.9
1,963,068	+		GFF1937	0.48	+0.3
1,963,072	-		GFF1937	0.49	+0.5
1,963,074	-		GFF1937	0.49	-0.2
1,963,074	-		GFF1937	0.49	-2.4
1,963,074	-		GFF1937	0.49	-1.0
1,963,078	-		GFF1937	0.49	-0.9
1,963,111	+		GFF1937	0.51	+0.0
1,963,142	+		GFF1937	0.52	-0.4
1,963,150	-		GFF1937	0.53	-0.2
1,963,157	+		GFF1937	0.53	-1.4
1,963,162	+		GFF1937	0.53	+0.0
1,963,170	-		GFF1937	0.54	-0.9
1,963,175	-		GFF1937	0.54	+0.3
1,963,188	-		GFF1937	0.55	+1.2
1,963,188	-		GFF1937	0.55	+0.4
1,963,190	+		GFF1937	0.55	+0.5
1,963,198	-		GFF1937	0.55	+0.6
1,963,229	-		GFF1937	0.57	+0.4
1,963,259	-		GFF1937	0.58	+1.2
1,963,259	-		GFF1937	0.58	-0.7
1,963,289	+		GFF1937	0.60	-0.9
1,963,302	-		GFF1937	0.60	-1.8
1,963,308	+		GFF1937	0.61	-0.7
1,963,308	+		GFF1937	0.61	-0.3
1,963,308	+		GFF1937	0.61	+0.1
1,963,316	-		GFF1937	0.61	-0.4
1,963,316	-		GFF1937	0.61	-0.5
1,963,316	-		GFF1937	0.61	-0.6
1,963,316	-		GFF1937	0.61	+0.5
1,963,316	-		GFF1937	0.61	-0.6
1,963,364	-		GFF1937	0.64	+0.3
1,963,366	-		GFF1937	0.64	-0.7
1,963,376	+		GFF1937	0.64	-1.5
1,963,380	+		GFF1937	0.64	-0.3
1,963,412	+		GFF1937	0.66	+1.4
1,963,430	+		GFF1937	0.67	+0.0
1,963,430	+		GFF1937	0.67	+0.5
1,963,438	-		GFF1937	0.67	-0.8
1,963,438	-		GFF1937	0.67	+0.9
1,963,449	-		GFF1937	0.68	+0.6
1,963,493	+		GFF1937	0.70	-0.1
1,963,493	-		GFF1937	0.70	+0.0
1,963,499	-		GFF1937	0.71	+0.2
1,963,528	-		GFF1937	0.72	+0.4
1,963,528	-		GFF1937	0.72	+0.5
1,963,528	-		GFF1937	0.72	+0.8
1,963,528	-		GFF1937	0.72	-0.7
1,963,528	-		GFF1937	0.72	-0.8
1,963,531	-		GFF1937	0.72	-2.2
1,963,537	+		GFF1937	0.73	-0.9
1,963,556	+		GFF1937	0.74	-1.2
1,963,556	+		GFF1937	0.74	+0.7
1,963,564	-		GFF1937	0.74	-0.7
1,963,564	-		GFF1937	0.74	-0.1
1,963,564	-		GFF1937	0.74	-0.3
1,963,566	+		GFF1937	0.74	+0.7
1,963,605	+		GFF1937	0.76	-0.1
1,963,605	+		GFF1937	0.76	+0.2
1,963,605	+		GFF1937	0.76	-1.2
1,963,613	-		GFF1937	0.77	+0.4
1,963,614	+		GFF1937	0.77	-0.9
1,963,614	+		GFF1937	0.77	-0.4
1,963,614	+		GFF1937	0.77	+1.0
1,963,614	+		GFF1937	0.77	-0.6
1,963,622	+		GFF1937	0.77	+0.2
1,963,622	-		GFF1937	0.77	-1.4
1,963,622	-		GFF1937	0.77	-0.1
1,963,622	-		GFF1937	0.77	-0.7
1,963,622	-		GFF1937	0.77	-1.4
1,963,627	+		GFF1937	0.77	+1.4
1,963,630	-		GFF1937	0.77	+0.8
1,963,632	-		GFF1937	0.78	-0.3
1,963,655	+		GFF1937	0.79	-0.2
1,963,655	+		GFF1937	0.79	-0.7
1,963,663	-		GFF1937	0.79	+0.4
1,963,663	-		GFF1937	0.79	+0.3
1,963,663	-		GFF1937	0.79	-1.1
1,963,663	-		GFF1937	0.79	+0.5
1,963,663	-		GFF1937	0.79	-0.2
1,963,665	+		GFF1937	0.79	-0.6
1,963,681	-		GFF1937	0.80	+1.2
1,963,689	+		GFF1937	0.81	-1.7
1,963,697	-		GFF1937	0.81	+0.5
1,963,697	-		GFF1937	0.81	-1.0
1,963,697	-		GFF1937	0.81	-1.6
1,963,697	-		GFF1937	0.81	+1.0
1,963,697	-		GFF1937	0.81	+0.2
1,963,698	+		GFF1937	0.81	+0.8
1,963,699	+		GFF1937	0.81	-0.3
1,963,700	+		GFF1937	0.81	+0.3
1,963,700	+		GFF1937	0.81	+0.6
1,963,702	-		GFF1937	0.81	+0.3
1,963,706	-		GFF1937	0.81	-0.1
1,963,719	-		GFF1937	0.82	-0.2
1,963,721	-		GFF1937	0.82	-0.0
1,963,758	-		GFF1937	0.84	+0.3
1,963,787	+		GFF1937	0.86	-0.4
1,963,790	-		GFF1937	0.86	-1.2
1,963,792	+		GFF1937	0.86	-2.0
1,963,792	+		GFF1937	0.86	-0.4
1,963,792	+		GFF1937	0.86	-1.1
1,963,795	-		GFF1937	0.86	-0.9
1,963,800	-		GFF1937	0.86	-0.1
1,963,800	-		GFF1937	0.86	+0.1
1,963,800	-		GFF1937	0.86	+0.4
1,963,800	-		GFF1937	0.86	-0.6
1,963,800	-		GFF1937	0.86	-0.3
1,963,800	-		GFF1937	0.86	+0.7
1,963,802	+		GFF1937	0.86	-0.4
1,963,802	+		GFF1937	0.86	-1.1
1,963,804	-		GFF1937	0.86	-1.4
1,963,810	-		GFF1937	0.87	+1.2
1,963,810	-		GFF1937	0.87	-1.0
1,963,822	+		GFF1937	0.87	-1.5
1,963,825	-		GFF1937	0.88	+0.5
1,963,830	-		GFF1937	0.88	-0.8
1,963,876	-				-0.1
1,963,889	+				-0.8
1,963,892	-				+0.1
1,963,911	-				+0.3
1,963,921	-				+1.1
1,963,945	-				-1.1
1,963,959	+				+1.4
1,963,967	-				-0.4
1,963,967	-				+0.1
1,963,981	+				+0.2
1,963,984	-				-0.5
1,963,989	-				-0.1
1,963,989	-				-0.6
1,964,000	+				-0.1
1,964,000	+				-0.6
1,964,008	-				+0.2
1,964,008	-				-0.1
1,964,023	-				-0.5
1,964,097	+				-0.7
1,964,105	-				+0.4
1,964,105	-				-0.6
1,964,165	+				-0.4
1,964,165	+				-1.2
1,964,165	+				+0.5
1,964,165	+				-1.2
1,964,165	+				+0.6
1,964,165	+				-1.1
1,964,170	+				+0.1
1,964,173	-				+1.2
1,964,173	-				+0.6
1,964,173	-				-0.1
1,964,173	-				+0.3
1,964,173	-				-0.6
1,964,183	+				-1.7
1,964,196	-				-0.2
1,964,198	-				-0.5
1,964,241	-				-0.7
1,964,286	-				-1.1