Experiment: JK42
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rnt and OKFHMN_27430 are separated by 102 nucleotides OKFHMN_27430 and nemA are separated by 80 nucleotides nemA and nemR are separated by 36 nucleotides nemR and ydhL are separated by 102 nucleotides
OKFHMN_27425: rnt - ribonuclease T, at 5,281,700 to 5,282,347
rnt
OKFHMN_27430: OKFHMN_27430 - Lactoylglutathione lyase, at 5,282,450 to 5,282,857
_27430
OKFHMN_27435: nemA - N-ethylmaleimide reductase, at 5,282,938 to 5,284,035
nemA
OKFHMN_27440: nemR - DNA-binding transcriptional regulator NemR, at 5,284,072 to 5,284,671
nemR
OKFHMN_27445: ydhL - Uncharacterized protein YdhL, at 5,284,774 to 5,285,013
ydhL
Position (kb) 5282
5283
5284
5285 Strain fitness (log2 ratio) -1
0
1
2 at 5282.452 kb on - strand at 5282.537 kb on - strand, within OKFHMN_27430 at 5282.618 kb on - strand, within OKFHMN_27430 at 5282.618 kb on - strand, within OKFHMN_27430 at 5282.644 kb on - strand, within OKFHMN_27430 at 5282.662 kb on - strand, within OKFHMN_27430 at 5282.960 kb on + strand at 5282.961 kb on - strand at 5282.982 kb on - strand at 5283.086 kb on - strand, within nemA at 5283.167 kb on - strand, within nemA at 5283.190 kb on - strand, within nemA at 5283.191 kb on + strand, within nemA at 5283.225 kb on + strand, within nemA at 5283.226 kb on - strand, within nemA at 5283.226 kb on - strand, within nemA at 5283.642 kb on + strand, within nemA at 5283.642 kb on + strand, within nemA at 5283.902 kb on + strand, within nemA at 5284.407 kb on - strand, within nemR at 5284.432 kb on - strand, within nemR at 5284.473 kb on - strand, within nemR at 5284.473 kb on - strand, within nemR at 5284.473 kb on - strand, within nemR at 5284.536 kb on - strand, within nemR at 5284.536 kb on - strand, within nemR
Per-strain Table
Position Strand Gene LocusTag Fraction JK42 remove 5,282,452 - +0.5 5,282,537 - OKFHMN_27430 0.21 -1.5 5,282,618 - OKFHMN_27430 0.41 +0.9 5,282,618 - OKFHMN_27430 0.41 +0.1 5,282,644 - OKFHMN_27430 0.48 -1.1 5,282,662 - OKFHMN_27430 0.52 -1.6 5,282,960 + +0.5 5,282,961 - +1.8 5,282,982 - +0.3 5,283,086 - nemA OKFHMN_27435 0.13 +0.3 5,283,167 - nemA OKFHMN_27435 0.21 -0.0 5,283,190 - nemA OKFHMN_27435 0.23 +1.3 5,283,191 + nemA OKFHMN_27435 0.23 +0.9 5,283,225 + nemA OKFHMN_27435 0.26 +1.3 5,283,226 - nemA OKFHMN_27435 0.26 +0.0 5,283,226 - nemA OKFHMN_27435 0.26 +0.3 5,283,642 + nemA OKFHMN_27435 0.64 +0.7 5,283,642 + nemA OKFHMN_27435 0.64 +0.5 5,283,902 + nemA OKFHMN_27435 0.88 +0.3 5,284,407 - nemR OKFHMN_27440 0.56 -0.8 5,284,432 - nemR OKFHMN_27440 0.60 +0.0 5,284,473 - nemR OKFHMN_27440 0.67 +1.0 5,284,473 - nemR OKFHMN_27440 0.67 +0.1 5,284,473 - nemR OKFHMN_27440 0.67 -0.2 5,284,536 - nemR OKFHMN_27440 0.77 +0.2 5,284,536 - nemR OKFHMN_27440 0.77 -0.0
Or see this region's nucleotide sequence