Strain Fitness in Escherichia coli ECRC100 around OKFHMN_27350

Experiment: JK42

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JK42
5,263,377	+	ydhS	OKFHMN_27330	0.87	-0.3
5,263,411	-	ydhS	OKFHMN_27330	0.90	-0.2
5,263,696	-				-0.1
5,263,940	+	ydhR	OKFHMN_27335	0.77	+0.1
5,263,941	-	ydhR	OKFHMN_27335	0.77	+0.5
5,263,977	-	ydhR	OKFHMN_27335	0.89	-0.1
5,264,034	+				+0.9
5,264,062	-				+0.3
5,264,186	-				+0.6
5,264,186	-				-0.7
5,264,283	-				+0.5
5,264,283	-				+1.1
5,264,283	-				-0.3
5,264,283	-				-0.7
5,264,515	+				-0.7
5,264,515	+				+0.7
5,264,533	+				+0.9
5,264,539	+				+0.5
5,264,824	+	ydhQ	OKFHMN_27355	0.19	-1.8
5,264,825	-	ydhQ	OKFHMN_27355	0.19	-1.0
5,264,851	+	ydhQ	OKFHMN_27355	0.21	+1.3
5,264,950	+	ydhQ	OKFHMN_27355	0.29	+0.5
5,265,145	+	ydhQ	OKFHMN_27355	0.45	-0.3
5,265,172	+	ydhQ	OKFHMN_27355	0.47	+0.5
5,265,251	+	ydhQ	OKFHMN_27355	0.53	+1.1