Strain Fitness in Escherichia coli ECRC100 around OKFHMN_25090

Experiment: JK42

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntrssA and OKFHMN_25085 overlap by 4 nucleotidesOKFHMN_25085 and OKFHMN_25090 overlap by 4 nucleotidesOKFHMN_25090 and tnp-IS3 are separated by 177 nucleotides OKFHMN_25080: rssA - phospholipase, at 4,867,102 to 4,868,172 rssA OKFHMN_25085: OKFHMN_25085 - chemotaxis protein, at 4,868,169 to 4,869,074 _25085 OKFHMN_25090: OKFHMN_25090 - dGTPase, at 4,869,071 to 4,869,754 _25090 OKFHMN_25095: tnp-IS3 - IS3 family transposase, at 4,869,932 to 4,870,819 tnp-IS3 Position (kb) 4869 4870Strain fitness (log2 ratio) -1 0 1at 4869.826 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction JK42
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4,869,826 - +0.9

Or see this region's nucleotide sequence