Strain Fitness in Sphingobium sp. HT1-2 around GFF5038

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
5,033,856	-		GFF5037	0.42	+0.6
5,033,864	+		GFF5037	0.43	-2.4
5,033,872	-		GFF5037	0.43	-0.3
5,033,901	+		GFF5037	0.45	-0.1
5,033,908	+		GFF5037	0.46	+0.2
5,033,923	-		GFF5037	0.47	+0.4
5,033,927	+		GFF5037	0.47	+0.4
5,033,935	-		GFF5037	0.48	+0.8
5,033,942	+		GFF5037	0.48	+1.1
5,033,942	+		GFF5037	0.48	-0.6
5,033,959	+		GFF5037	0.49	+1.0
5,034,011	-		GFF5037	0.53	-0.5
5,034,011	-		GFF5037	0.53	+1.2
5,034,011	-		GFF5037	0.53	-0.5
5,034,013	+		GFF5037	0.53	+1.2
5,034,019	+		GFF5037	0.53	-0.0
5,034,019	+		GFF5037	0.53	-0.0
5,034,021	-		GFF5037	0.53	-1.1
5,034,026	+		GFF5037	0.54	-0.2
5,034,036	+		GFF5037	0.54	+0.5
5,034,044	-		GFF5037	0.55	+0.1
5,034,046	+		GFF5037	0.55	+0.8
5,034,088	-		GFF5037	0.58	-1.7
5,034,098	-		GFF5037	0.58	-0.5
5,034,101	+		GFF5037	0.59	-1.5
5,034,125	+		GFF5037	0.60	+0.7
5,034,133	+		GFF5037	0.61	-0.3
5,034,133	-		GFF5037	0.61	-0.5
5,034,138	+		GFF5037	0.61	-1.6
5,034,143	+		GFF5037	0.61	-2.3
5,034,146	-		GFF5037	0.61	+1.1
5,034,146	-		GFF5037	0.61	-1.1
5,034,154	+		GFF5037	0.62	-0.1
5,034,167	-		GFF5037	0.63	-1.4
5,034,167	-		GFF5037	0.63	+0.8
5,034,167	-		GFF5037	0.63	-0.4
5,034,176	+		GFF5037	0.63	-1.3
5,034,178	+		GFF5037	0.64	+0.7
5,034,182	+		GFF5037	0.64	+0.4
5,034,182	+		GFF5037	0.64	+0.6
5,034,190	-		GFF5037	0.64	-1.1
5,034,190	-		GFF5037	0.64	+0.4
5,034,190	-		GFF5037	0.64	-1.7
5,034,190	-		GFF5037	0.64	+0.3
5,034,190	-		GFF5037	0.64	-0.7
5,034,190	-		GFF5037	0.64	-1.0
5,034,190	-		GFF5037	0.64	-0.7
5,034,193	-		GFF5037	0.65	-2.0
5,034,197	+		GFF5037	0.65	-0.2
5,034,197	+		GFF5037	0.65	+0.5
5,034,203	-		GFF5037	0.65	-0.1
5,034,205	-		GFF5037	0.65	-0.3
5,034,205	-		GFF5037	0.65	+0.4
5,034,205	-		GFF5037	0.65	+0.8
5,034,205	-		GFF5037	0.65	-0.7
5,034,229	+		GFF5037	0.67	-2.1
5,034,238	-		GFF5037	0.68	-0.6
5,034,254	+		GFF5037	0.69	+0.1
5,034,262	-		GFF5037	0.69	-1.1
5,034,272	+		GFF5037	0.70	+0.1
5,034,272	-		GFF5037	0.70	-1.9
5,034,280	+		GFF5037	0.70	-1.7
5,034,280	-		GFF5037	0.70	-1.6
5,034,324	-		GFF5037	0.73	+1.0
5,034,333	+		GFF5037	0.74	-0.4
5,034,334	-		GFF5037	0.74	+0.0
5,034,336	-		GFF5037	0.74	+1.0
5,034,341	-		GFF5037	0.74	-0.5
5,034,377	-		GFF5037	0.77	+1.0
5,034,389	+		GFF5037	0.78	+0.9
5,034,399	+		GFF5037	0.78	-0.8
5,034,399	+		GFF5037	0.78	+0.1
5,034,399	+		GFF5037	0.78	+0.2
5,034,399	+		GFF5037	0.78	-0.4
5,034,407	-		GFF5037	0.79	-0.1
5,034,412	+		GFF5037	0.79	+2.2
5,034,426	+		GFF5037	0.80	-0.5
5,034,439	-		GFF5037	0.81	+0.1
5,034,507	+		GFF5037	0.85	+1.0
5,034,515	-		GFF5037	0.86	-1.4
5,034,521	+		GFF5037	0.86	+0.8
5,034,531	+		GFF5037	0.87	-1.6
5,034,539	-		GFF5037	0.88	-0.1
5,034,539	-		GFF5037	0.88	-1.3
5,034,539	-		GFF5037	0.88	-0.3
5,034,539	-		GFF5037	0.88	-0.9
5,034,540	-		GFF5037	0.88	-0.3
5,034,542	+		GFF5037	0.88	+0.9
5,034,545	-		GFF5037	0.88	-0.4
5,034,545	-		GFF5037	0.88	+0.6
5,034,545	-		GFF5037	0.88	+1.0
5,034,548	+		GFF5037	0.88	-1.5
5,034,556	-		GFF5037	0.89	+1.0
5,034,556	-		GFF5037	0.89	-0.2
5,034,585	+				+0.3
5,034,593	-				-0.5
5,034,604	-				+0.1
5,034,606	+				+1.0
5,034,606	+				-1.1
5,034,614	-				-0.4
5,034,614	-				+0.3
5,034,632	+				+0.2
5,034,640	+				+1.0
5,034,655	+				-0.9
5,034,664	-				+0.7
5,034,666	-				-0.6
5,034,684	+				+1.0
5,034,692	+				-1.4
5,034,692	+				+1.1
5,034,692	+				-0.2
5,034,700	-				+1.4
5,034,707	+				-0.0
5,034,707	+				+1.0
5,034,707	+				-0.7
5,034,707	+				+0.3
5,034,707	+				-1.5
5,034,707	+				+1.1
5,034,707	+				-2.1
5,034,707	+				+1.8
5,034,707	+				+0.3
5,034,707	+				+0.4
5,034,707	+				-0.5
5,034,715	-				+0.4
5,034,715	-				-1.5
5,034,715	-				-0.7
5,034,715	-				+1.4
5,034,715	-				-0.3
5,034,715	-				-1.6
5,034,715	-				-0.2
5,034,715	-				+0.7
5,034,715	-				-0.0
5,034,715	-				+1.3
5,034,715	-				-1.4
5,034,720	-				+2.1
5,034,738	+				+0.9
5,034,738	+				-1.7
5,034,743	+				+0.2
5,034,743	+				+0.3
5,034,743	+				-0.1
5,034,746	-				+1.0
5,034,751	-				-2.2
5,034,751	-				+1.6
5,034,751	-				-0.8
5,034,751	-				-0.7
5,034,751	-				-0.8
5,034,756	-				-0.6
5,034,756	-				+0.4
5,034,788	+				+0.3
5,034,796	+				+1.1
5,034,796	-				-1.6
5,034,804	-				+0.5
5,034,808	+				-0.8
5,034,816	-				-0.3
5,034,820	+				+0.4
5,034,822	+				+0.5
5,034,828	-				+0.2
5,034,830	-				+0.4
5,034,835	-				+1.1
5,034,869	+				+0.2
5,034,874	+				-0.7
5,034,874	+				+0.1
5,034,874	+				-0.9
5,034,874	+				-0.4
5,034,879	+				-1.3
5,034,879	+				-1.0
5,034,882	-				+0.2
5,034,882	-				-1.7
5,034,882	-				-0.4
5,034,887	-				-0.9
5,034,907	+				+0.2
5,034,928	+				+0.3
5,034,928	+				+1.9
5,034,936	-				-0.3
5,034,936	-				-0.4
5,034,936	-				-0.5
5,034,937	+				-0.1
5,034,992	+				+0.7
5,034,992	+				-0.4
5,034,992	+				-0.3
5,034,992	+				-1.1
5,035,000	-				+1.5
5,035,000	-				+0.3
5,035,000	-				-0.3
5,035,000	-				-1.4
5,035,000	-				-0.2
5,035,012	+				-2.7
5,035,020	-				+0.2
5,035,025	+				+0.7
5,035,025	+				-0.2
5,035,025	+				-0.8
5,035,027	+				-0.6
5,035,033	-				-0.4
5,035,033	-				-0.0
5,035,033	-				+0.5
5,035,033	-				-0.6
5,035,035	+				+0.5
5,035,037	+				+0.2
5,035,037	+				+0.9
5,035,045	-				-0.4
5,035,064	-				+0.7
5,035,064	-				+0.0
5,035,083	+				-1.0
5,035,083	+				-0.3
5,035,091	-				-0.2
5,035,103	+				+0.2
5,035,111	+				-1.5
5,035,121	+				+0.2
5,035,130	+				+0.3
5,035,140	+		GFF5038	0.10	+0.8
5,035,140	+		GFF5038	0.10	+0.3
5,035,148	+		GFF5038	0.11	+1.3
5,035,148	+		GFF5038	0.11	-0.1
5,035,172	-		GFF5038	0.11	-1.2
5,035,179	+		GFF5038	0.12	+1.9
5,035,179	+		GFF5038	0.12	+0.6
5,035,184	+		GFF5038	0.12	+1.2
5,035,187	-		GFF5038	0.12	+0.2
5,035,187	-		GFF5038	0.12	+1.4
5,035,192	-		GFF5038	0.12	-0.1
5,035,197	-		GFF5038	0.12	-1.4
5,035,207	+		GFF5038	0.13	-0.1
5,035,207	+		GFF5038	0.13	-1.4
5,035,217	+		GFF5038	0.13	+0.3
5,035,217	+		GFF5038	0.13	-0.6
5,035,244	+		GFF5038	0.14	-0.7
5,035,251	+		GFF5038	0.14	-0.4
5,035,252	-		GFF5038	0.14	+0.5
5,035,259	-		GFF5038	0.14	-0.2
5,035,295	+		GFF5038	0.16	-1.1
5,035,296	-		GFF5038	0.16	+0.1
5,035,303	-		GFF5038	0.16	+0.0
5,035,303	-		GFF5038	0.16	+1.0
5,035,304	-		GFF5038	0.16	+1.2
5,035,304	-		GFF5038	0.16	-1.0
5,035,311	-		GFF5038	0.16	-0.8
5,035,314	-		GFF5038	0.16	+0.7
5,035,320	+		GFF5038	0.17	+0.0
5,035,320	+		GFF5038	0.17	-2.1
5,035,320	+		GFF5038	0.17	+0.5
5,035,320	+		GFF5038	0.17	-0.0
5,035,320	+		GFF5038	0.17	+0.8
5,035,328	-		GFF5038	0.17	+1.1
5,035,328	-		GFF5038	0.17	-0.7
5,035,328	-		GFF5038	0.17	+0.2
5,035,328	-		GFF5038	0.17	-0.8
5,035,330	+		GFF5038	0.17	-0.4
5,035,334	-		GFF5038	0.17	-0.3
5,035,335	+		GFF5038	0.17	+0.2
5,035,335	+		GFF5038	0.17	+0.1
5,035,338	-		GFF5038	0.17	+1.2
5,035,338	-		GFF5038	0.17	-0.5
5,035,343	-		GFF5038	0.17	-0.9
5,035,343	-		GFF5038	0.17	+0.7
5,035,343	-		GFF5038	0.17	-1.4
5,035,348	-		GFF5038	0.18	-0.8
5,035,376	-		GFF5038	0.19	-0.0
5,035,433	-		GFF5038	0.21	-1.0
5,035,435	+		GFF5038	0.21	+1.5
5,035,435	+		GFF5038	0.21	+0.8
5,035,435	+		GFF5038	0.21	-0.1
5,035,435	+		GFF5038	0.21	-0.1
5,035,435	+		GFF5038	0.21	-1.8
5,035,435	+		GFF5038	0.21	-0.7
5,035,435	+		GFF5038	0.21	-0.3
5,035,442	+		GFF5038	0.21	+0.8
5,035,442	+		GFF5038	0.21	+1.7
5,035,443	+		GFF5038	0.21	+0.8
5,035,443	+		GFF5038	0.21	-0.3
5,035,443	-		GFF5038	0.21	+0.5
5,035,443	-		GFF5038	0.21	-0.1
5,035,443	-		GFF5038	0.21	+0.3
5,035,443	-		GFF5038	0.21	+1.0
5,035,443	-		GFF5038	0.21	+0.5
5,035,443	-		GFF5038	0.21	-1.4
5,035,443	-		GFF5038	0.21	+0.2
5,035,443	-		GFF5038	0.21	-0.1
5,035,443	-		GFF5038	0.21	+0.9
5,035,444	+		GFF5038	0.21	+1.9
5,035,450	-		GFF5038	0.21	+0.0
5,035,450	-		GFF5038	0.21	-0.2
5,035,450	-		GFF5038	0.21	-1.1
5,035,451	-		GFF5038	0.21	-0.3
5,035,452	-		GFF5038	0.21	-0.9
5,035,452	-		GFF5038	0.21	-1.1
5,035,462	+		GFF5038	0.22	+1.0
5,035,477	+		GFF5038	0.22	-0.7
5,035,482	+		GFF5038	0.22	-0.7
5,035,482	+		GFF5038	0.22	+0.6
5,035,482	+		GFF5038	0.22	-0.7
5,035,485	-		GFF5038	0.22	+0.4
5,035,490	-		GFF5038	0.23	-1.8
5,035,490	-		GFF5038	0.23	+0.1
5,035,504	-		GFF5038	0.23	+0.6
5,035,521	-		GFF5038	0.24	-0.1
5,035,539	-		GFF5038	0.24	+0.3
5,035,546	-		GFF5038	0.25	+0.1
5,035,584	-		GFF5038	0.26	+0.4
5,035,589	-		GFF5038	0.26	-0.0
5,035,591	-		GFF5038	0.26	-0.2
5,035,621	-		GFF5038	0.27	-0.7
5,035,640	-		GFF5038	0.28	-0.2
5,035,745	-		GFF5038	0.32	+1.2
5,035,764	+		GFF5038	0.32	-0.2
5,035,772	-		GFF5038	0.33	-0.0
5,035,772	-		GFF5038	0.33	+0.6
5,035,772	-		GFF5038	0.33	-1.1
5,035,783	+		GFF5038	0.33	+0.2
5,035,783	+		GFF5038	0.33	-0.0
5,035,783	+		GFF5038	0.33	+0.6
5,035,791	-		GFF5038	0.33	+2.0
5,035,803	+		GFF5038	0.34	-0.8
5,035,803	+		GFF5038	0.34	+0.2
5,035,810	-		GFF5038	0.34	-0.4
5,035,818	-		GFF5038	0.34	-0.4
5,035,825	+		GFF5038	0.35	-1.6
5,035,830	+		GFF5038	0.35	+0.7
5,035,830	+		GFF5038	0.35	-0.4
5,035,839	+		GFF5038	0.35	-0.7
5,035,843	+		GFF5038	0.35	-0.8
5,035,843	+		GFF5038	0.35	-0.5
5,035,845	+		GFF5038	0.35	-0.1
5,035,845	+		GFF5038	0.35	+0.6
5,035,845	+		GFF5038	0.35	-0.8
5,035,845	+		GFF5038	0.35	+0.5
5,035,845	+		GFF5038	0.35	-0.3
5,035,845	+		GFF5038	0.35	+1.3
5,035,845	+		GFF5038	0.35	-0.2
5,035,845	+		GFF5038	0.35	+0.5
5,035,845	+		GFF5038	0.35	-0.6
5,035,845	+		GFF5038	0.35	+0.1
5,035,850	+		GFF5038	0.35	+0.7
5,035,850	+		GFF5038	0.35	+0.3
5,035,850	+		GFF5038	0.35	-0.4
5,035,850	+		GFF5038	0.35	+1.0
5,035,850	+		GFF5038	0.35	-0.5
5,035,850	+		GFF5038	0.35	+0.7
5,035,850	+		GFF5038	0.35	+0.5
5,035,850	+		GFF5038	0.35	-1.0
5,035,850	+		GFF5038	0.35	+0.8
5,035,853	-		GFF5038	0.36	-0.0
5,035,853	-		GFF5038	0.36	+0.8
5,035,853	-		GFF5038	0.36	-0.5
5,035,853	-		GFF5038	0.36	-0.6
5,035,853	-		GFF5038	0.36	-0.1
5,035,855	+		GFF5038	0.36	+1.5
5,035,855	+		GFF5038	0.36	+1.5
5,035,858	-		GFF5038	0.36	+0.6
5,035,858	-		GFF5038	0.36	+0.9
5,035,860	+		GFF5038	0.36	-0.5
5,035,860	+		GFF5038	0.36	-0.2
5,035,860	+		GFF5038	0.36	-0.2
5,035,860	+		GFF5038	0.36	+1.2
5,035,863	-		GFF5038	0.36	+0.0
5,035,868	-		GFF5038	0.36	+0.7
5,035,868	-		GFF5038	0.36	-0.1
5,035,870	+		GFF5038	0.36	+0.2
5,035,870	+		GFF5038	0.36	+0.4
5,035,878	-		GFF5038	0.36	+0.2
5,035,878	-		GFF5038	0.36	+0.2
5,035,878	-		GFF5038	0.36	+1.7
5,035,878	-		GFF5038	0.36	-0.4
5,035,893	-		GFF5038	0.37	-1.1
5,035,917	-		GFF5038	0.38	-0.7
5,035,946	-		GFF5038	0.39	+0.4
5,035,946	-		GFF5038	0.39	-0.8
5,035,951	-		GFF5038	0.39	+0.5
5,035,951	-		GFF5038	0.39	+0.5
5,035,965	-		GFF5038	0.40	-1.5
5,035,991	-		GFF5038	0.40	+0.2
5,036,026	+		GFF5038	0.42	-0.5
5,036,026	+		GFF5038	0.42	-0.8
5,036,034	-		GFF5038	0.42	-0.3
5,036,035	-		GFF5038	0.42	+0.2
5,036,036	-		GFF5038	0.42	+1.4
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