Strain Fitness in Sphingobium sp. HT1-2 around GFF5037

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
5,032,219	-		GFF5036	0.28	+0.4
5,032,219	-		GFF5036	0.28	+0.9
5,032,219	-		GFF5036	0.28	-0.9
5,032,227	-		GFF5036	0.28	+0.6
5,032,229	+		GFF5036	0.29	+0.1
5,032,229	+		GFF5036	0.29	-0.2
5,032,246	+		GFF5036	0.30	+0.4
5,032,303	-		GFF5036	0.34	-0.8
5,032,306	+		GFF5036	0.34	-0.2
5,032,314	-		GFF5036	0.35	-1.2
5,032,368	+		GFF5036	0.39	+0.7
5,032,368	+		GFF5036	0.39	-2.9
5,032,376	-		GFF5036	0.39	-1.6
5,032,376	-		GFF5036	0.39	+0.3
5,032,416	+		GFF5036	0.42	+0.1
5,032,416	+		GFF5036	0.42	+0.1
5,032,421	+		GFF5036	0.42	+0.7
5,032,421	+		GFF5036	0.42	+0.0
5,032,424	-		GFF5036	0.43	+0.1
5,032,424	-		GFF5036	0.43	+1.5
5,032,424	-		GFF5036	0.43	+0.1
5,032,426	+		GFF5036	0.43	+0.2
5,032,429	-		GFF5036	0.43	-1.2
5,032,429	-		GFF5036	0.43	-0.4
5,032,434	-		GFF5036	0.43	-1.5
5,032,440	+		GFF5036	0.44	-1.4
5,032,460	-		GFF5036	0.45	+1.8
5,032,467	+		GFF5036	0.46	-1.6
5,032,467	+		GFF5036	0.46	-1.1
5,032,495	+		GFF5036	0.48	-2.1
5,032,495	+		GFF5036	0.48	+0.3
5,032,538	+		GFF5036	0.51	+0.2
5,032,561	-		GFF5036	0.52	-1.6
5,032,562	+		GFF5036	0.52	-0.2
5,032,570	-		GFF5036	0.53	+1.0
5,032,600	+		GFF5036	0.55	-0.0
5,032,600	+		GFF5036	0.55	+0.4
5,032,600	+		GFF5036	0.55	-0.3
5,032,600	+		GFF5036	0.55	-0.4
5,032,608	-		GFF5036	0.56	+1.2
5,032,608	-		GFF5036	0.56	+0.4
5,032,608	-		GFF5036	0.56	-1.7
5,032,618	-		GFF5036	0.57	-1.5
5,032,671	-		GFF5036	0.60	+1.0
5,032,681	+		GFF5036	0.61	-0.4
5,032,681	+		GFF5036	0.61	-0.1
5,032,681	+		GFF5036	0.61	+0.0
5,032,681	+		GFF5036	0.61	+0.7
5,032,689	-		GFF5036	0.62	-2.3
5,032,689	-		GFF5036	0.62	-0.1
5,032,689	-		GFF5036	0.62	+1.2
5,032,701	+		GFF5036	0.62	+0.3
5,032,701	+		GFF5036	0.62	+0.2
5,032,701	+		GFF5036	0.62	-0.5
5,032,701	+		GFF5036	0.62	+0.5
5,032,701	+		GFF5036	0.62	-0.5
5,032,701	+		GFF5036	0.62	+1.3
5,032,701	+		GFF5036	0.62	-1.2
5,032,701	+		GFF5036	0.62	-0.7
5,032,709	-		GFF5036	0.63	-0.4
5,032,709	-		GFF5036	0.63	+0.3
5,032,709	-		GFF5036	0.63	+0.4
5,032,711	+		GFF5036	0.63	-1.1
5,032,711	+		GFF5036	0.63	-0.7
5,032,716	+		GFF5036	0.64	+0.7
5,032,719	-		GFF5036	0.64	-0.7
5,032,719	-		GFF5036	0.64	-1.5
5,032,721	+		GFF5036	0.64	-0.6
5,032,721	+		GFF5036	0.64	+0.5
5,032,721	+		GFF5036	0.64	-0.2
5,032,721	+		GFF5036	0.64	-0.3
5,032,721	+		GFF5036	0.64	+0.3
5,032,725	-		GFF5036	0.64	+0.6
5,032,729	-		GFF5036	0.65	+0.2
5,032,729	-		GFF5036	0.65	-0.4
5,032,729	-		GFF5036	0.65	-0.6
5,032,729	-		GFF5036	0.65	-0.1
5,032,729	-		GFF5036	0.65	+0.7
5,032,729	-		GFF5036	0.65	+0.9
5,032,729	-		GFF5036	0.65	-0.7
5,032,736	+		GFF5036	0.65	+1.2
5,032,744	-		GFF5036	0.66	-1.1
5,032,744	-		GFF5036	0.66	-0.4
5,032,752	+		GFF5036	0.66	+0.7
5,032,792	+		GFF5036	0.69	-0.1
5,032,800	-		GFF5036	0.70	+0.9
5,032,800	-		GFF5036	0.70	-1.2
5,032,800	-		GFF5036	0.70	-0.4
5,032,800	-		GFF5036	0.70	-0.1
5,032,823	+		GFF5036	0.71	-0.3
5,032,823	+		GFF5036	0.71	-0.4
5,032,823	+		GFF5036	0.71	+0.6
5,032,823	+		GFF5036	0.71	+0.5
5,032,823	+		GFF5036	0.71	+0.4
5,032,825	+		GFF5036	0.71	-0.2
5,032,825	+		GFF5036	0.71	-0.3
5,032,825	+		GFF5036	0.71	-0.2
5,032,825	+		GFF5036	0.71	-0.5
5,032,825	+		GFF5036	0.71	-0.2
5,032,825	+		GFF5036	0.71	-1.8
5,032,825	+		GFF5036	0.71	-0.5
5,032,825	+		GFF5036	0.71	+0.7
5,032,825	+		GFF5036	0.71	-2.0
5,032,831	-		GFF5036	0.72	+0.4
5,032,831	-		GFF5036	0.72	+0.0
5,032,831	-		GFF5036	0.72	-0.9
5,032,831	-		GFF5036	0.72	-0.9
5,032,833	-		GFF5036	0.72	-2.7
5,032,833	-		GFF5036	0.72	-0.4
5,032,833	-		GFF5036	0.72	-0.2
5,032,833	-		GFF5036	0.72	+0.4
5,032,833	-		GFF5036	0.72	-0.7
5,032,833	-		GFF5036	0.72	-0.5
5,032,833	-		GFF5036	0.72	-0.0
5,032,833	-		GFF5036	0.72	-1.0
5,032,833	-		GFF5036	0.72	-0.1
5,032,833	-		GFF5036	0.72	+1.1
5,032,833	-		GFF5036	0.72	-0.5
5,032,833	-		GFF5036	0.72	-1.7
5,032,833	-		GFF5036	0.72	+0.7
5,032,833	-		GFF5036	0.72	-1.0
5,032,833	-		GFF5036	0.72	+2.2
5,032,833	-		GFF5036	0.72	+0.2
5,032,833	-		GFF5036	0.72	+1.6
5,032,833	-		GFF5036	0.72	-0.7
5,032,834	-		GFF5036	0.72	-0.0
5,032,840	+		GFF5036	0.72	-1.8
5,032,841	+		GFF5036	0.73	+1.2
5,032,844	-		GFF5036	0.73	+0.5
5,032,851	+		GFF5036	0.73	-1.0
5,032,856	+		GFF5036	0.74	-0.5
5,032,859	-		GFF5036	0.74	-2.0
5,032,864	-		GFF5036	0.74	-1.4
5,032,887	+		GFF5036	0.76	+0.8
5,032,905	+		GFF5036	0.77	+0.5
5,032,909	+		GFF5036	0.77	+1.4
5,032,912	-		GFF5036	0.78	+0.5
5,032,922	-		GFF5036	0.78	-0.4
5,032,935	-		GFF5036	0.79	-0.8
5,032,941	+		GFF5036	0.80	+0.9
5,032,941	+		GFF5036	0.80	-1.7
5,032,961	+		GFF5036	0.81	-2.3
5,032,961	+		GFF5036	0.81	-0.4
5,032,988	+		GFF5036	0.83	+0.4
5,033,008	+		GFF5036	0.85	+0.3
5,033,023	-		GFF5036	0.86	-0.7
5,033,031	+		GFF5036	0.86	-0.1
5,033,044	+		GFF5036	0.87	+0.6
5,033,044	+		GFF5036	0.87	+1.5
5,033,044	+		GFF5036	0.87	+0.4
5,033,070	-		GFF5036	0.89	-0.6
5,033,092	+				-1.9
5,033,099	+				+0.3
5,033,105	-				-0.3
5,033,107	-				+0.8
5,033,119	-				+0.0
5,033,134	+				-0.1
5,033,134	+				+0.3
5,033,138	-				-0.7
5,033,152	-				+0.6
5,033,170	+				-0.8
5,033,192	+				-0.6
5,033,192	+				-2.1
5,033,198	+				-1.0
5,033,198	+				+0.6
5,033,198	+				+1.5
5,033,200	+				-0.4
5,033,200	-				+0.0
5,033,200	-				+1.4
5,033,200	-				+1.2
5,033,201	-				-1.1
5,033,206	-				+0.9
5,033,208	-				-0.6
5,033,208	-				+1.1
5,033,210	+				+0.8
5,033,210	+				-0.7
5,033,210	+				-0.6
5,033,215	+				+1.1
5,033,215	+				-0.1
5,033,215	+				+0.6
5,033,215	+				-0.6
5,033,223	-				+0.3
5,033,223	-				+1.0
5,033,225	-				+1.3
5,033,228	-				-0.2
5,033,246	+				-0.2
5,033,251	+				+0.2
5,033,251	+				+0.3
5,033,251	+				+1.0
5,033,251	+				-1.1
5,033,251	+				+0.5
5,033,251	+				+0.6
5,033,259	-				-0.2
5,033,259	-				+0.7
5,033,259	-				+0.3
5,033,259	-				+0.0
5,033,259	-				-1.5
5,033,272	+				-2.7
5,033,285	+				+0.6
5,033,286	+				+1.0
5,033,301	+				-0.6
5,033,360	-				-2.6
5,033,369	+		GFF5037	0.10	-0.3
5,033,377	-		GFF5037	0.11	+1.3
5,033,377	-		GFF5037	0.11	-1.6
5,033,382	-		GFF5037	0.11	-0.1
5,033,388	+		GFF5037	0.11	+1.2
5,033,394	+		GFF5037	0.12	-0.1
5,033,410	-		GFF5037	0.13	+0.2
5,033,413	+		GFF5037	0.13	+0.5
5,033,413	+		GFF5037	0.13	+0.2
5,033,421	-		GFF5037	0.13	-2.0
5,033,421	-		GFF5037	0.13	-1.2
5,033,421	-		GFF5037	0.13	+0.2
5,033,423	+		GFF5037	0.14	+1.1
5,033,431	-		GFF5037	0.14	-0.9
5,033,437	-		GFF5037	0.15	+0.5
5,033,449	+		GFF5037	0.15	+0.9
5,033,449	+		GFF5037	0.15	-1.5
5,033,449	+		GFF5037	0.15	+0.5
5,033,449	-		GFF5037	0.15	+0.6
5,033,459	+		GFF5037	0.16	-0.0
5,033,472	-		GFF5037	0.17	+0.5
5,033,479	+		GFF5037	0.17	+1.0
5,033,487	-		GFF5037	0.18	-0.2
5,033,489	+		GFF5037	0.18	+1.2
5,033,489	-		GFF5037	0.18	+1.1
5,033,497	+		GFF5037	0.18	-1.1
5,033,497	-		GFF5037	0.18	-2.0
5,033,505	-		GFF5037	0.19	-1.1
5,033,514	-		GFF5037	0.20	+1.1
5,033,518	+		GFF5037	0.20	+0.7
5,033,540	+		GFF5037	0.21	+0.9
5,033,540	+		GFF5037	0.21	-0.4
5,033,543	-		GFF5037	0.22	+0.8
5,033,543	-		GFF5037	0.22	+1.1
5,033,545	+		GFF5037	0.22	+0.2
5,033,545	+		GFF5037	0.22	-0.1
5,033,545	+		GFF5037	0.22	+0.2
5,033,545	+		GFF5037	0.22	-0.6
5,033,545	+		GFF5037	0.22	+0.2
5,033,545	+		GFF5037	0.22	+0.5
5,033,545	+		GFF5037	0.22	+0.5
5,033,545	+		GFF5037	0.22	+0.7
5,033,545	+		GFF5037	0.22	+0.4
5,033,545	+		GFF5037	0.22	-0.5
5,033,553	-		GFF5037	0.22	-2.9
5,033,553	-		GFF5037	0.22	+0.9
5,033,553	-		GFF5037	0.22	-0.2
5,033,553	-		GFF5037	0.22	-0.3
5,033,553	-		GFF5037	0.22	-0.5
5,033,553	-		GFF5037	0.22	-0.2
5,033,553	-		GFF5037	0.22	+0.5
5,033,553	-		GFF5037	0.22	+0.5
5,033,567	-		GFF5037	0.23	+0.9
5,033,580	+		GFF5037	0.24	-1.5
5,033,581	+		GFF5037	0.24	-0.5
5,033,583	+		GFF5037	0.24	-0.7
5,033,588	+		GFF5037	0.25	-0.4
5,033,589	-		GFF5037	0.25	-0.2
5,033,591	+		GFF5037	0.25	+0.1
5,033,591	-		GFF5037	0.25	-0.8
5,033,606	-		GFF5037	0.26	-1.1
5,033,616	+		GFF5037	0.26	+0.8
5,033,626	-		GFF5037	0.27	+0.8
5,033,648	+		GFF5037	0.28	+0.6
5,033,652	+		GFF5037	0.29	+1.3
5,033,652	+		GFF5037	0.29	+0.3
5,033,652	+		GFF5037	0.29	-0.9
5,033,660	-		GFF5037	0.29	+0.0
5,033,660	-		GFF5037	0.29	-0.4
5,033,660	-		GFF5037	0.29	+1.3
5,033,660	-		GFF5037	0.29	-0.3
5,033,660	-		GFF5037	0.29	+0.1
5,033,660	-		GFF5037	0.29	+0.5
5,033,670	-		GFF5037	0.30	-0.6
5,033,681	+		GFF5037	0.31	-0.1
5,033,681	+		GFF5037	0.31	-1.8
5,033,707	+		GFF5037	0.32	-0.0
5,033,707	+		GFF5037	0.32	-1.1
5,033,728	-		GFF5037	0.34	+0.1
5,033,728	-		GFF5037	0.34	+0.7
5,033,728	-		GFF5037	0.34	+0.2
5,033,736	+		GFF5037	0.34	+1.6
5,033,736	+		GFF5037	0.34	+1.5
5,033,743	-		GFF5037	0.35	+0.2
5,033,744	-		GFF5037	0.35	-1.4
5,033,744	-		GFF5037	0.35	+0.8
5,033,747	+		GFF5037	0.35	-1.6
5,033,749	-		GFF5037	0.35	-0.6
5,033,750	-		GFF5037	0.35	-0.6
5,033,755	+		GFF5037	0.36	-0.9
5,033,755	+		GFF5037	0.36	-0.4
5,033,755	+		GFF5037	0.36	-1.5
5,033,764	+		GFF5037	0.36	+1.2
5,033,772	-		GFF5037	0.37	+2.4
5,033,781	+		GFF5037	0.37	+0.5
5,033,856	-		GFF5037	0.42	+0.6
5,033,864	+		GFF5037	0.43	-2.4
5,033,872	-		GFF5037	0.43	-0.3
5,033,901	+		GFF5037	0.45	-0.1
5,033,908	+		GFF5037	0.46	+0.2
5,033,923	-		GFF5037	0.47	+0.4
5,033,927	+		GFF5037	0.47	+0.4
5,033,935	-		GFF5037	0.48	+0.8
5,033,942	+		GFF5037	0.48	+1.1
5,033,942	+		GFF5037	0.48	-0.6
5,033,959	+		GFF5037	0.49	+1.0
5,034,011	-		GFF5037	0.53	-0.5
5,034,011	-		GFF5037	0.53	+1.2
5,034,011	-		GFF5037	0.53	-0.5
5,034,013	+		GFF5037	0.53	+1.2
5,034,019	+		GFF5037	0.53	-0.0
5,034,019	+		GFF5037	0.53	-0.0
5,034,021	-		GFF5037	0.53	-1.1
5,034,026	+		GFF5037	0.54	-0.2
5,034,036	+		GFF5037	0.54	+0.5
5,034,044	-		GFF5037	0.55	+0.1
5,034,046	+		GFF5037	0.55	+0.8
5,034,088	-		GFF5037	0.58	-1.7
5,034,098	-		GFF5037	0.58	-0.5
5,034,101	+		GFF5037	0.59	-1.5
5,034,125	+		GFF5037	0.60	+0.7
5,034,133	+		GFF5037	0.61	-0.3
5,034,133	-		GFF5037	0.61	-0.5
5,034,138	+		GFF5037	0.61	-1.6
5,034,143	+		GFF5037	0.61	-2.3
5,034,146	-		GFF5037	0.61	+1.1
5,034,146	-		GFF5037	0.61	-1.1
5,034,154	+		GFF5037	0.62	-0.1
5,034,167	-		GFF5037	0.63	-1.4
5,034,167	-		GFF5037	0.63	+0.8
5,034,167	-		GFF5037	0.63	-0.4
5,034,176	+		GFF5037	0.63	-1.3
5,034,178	+		GFF5037	0.64	+0.7
5,034,182	+		GFF5037	0.64	+0.4
5,034,182	+		GFF5037	0.64	+0.6
5,034,190	-		GFF5037	0.64	-1.1
5,034,190	-		GFF5037	0.64	+0.4
5,034,190	-		GFF5037	0.64	-1.7
5,034,190	-		GFF5037	0.64	+0.3
5,034,190	-		GFF5037	0.64	-0.7
5,034,190	-		GFF5037	0.64	-1.0
5,034,190	-		GFF5037	0.64	-0.7
5,034,193	-		GFF5037	0.65	-2.0
5,034,197	+		GFF5037	0.65	-0.2
5,034,197	+		GFF5037	0.65	+0.5
5,034,203	-		GFF5037	0.65	-0.1
5,034,205	-		GFF5037	0.65	-0.3
5,034,205	-		GFF5037	0.65	+0.4
5,034,205	-		GFF5037	0.65	+0.8
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