Strain Fitness in Sphingobium sp. HT1-2 around GFF4784

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,777,955	+		GFF4783	0.74	-1.9
4,777,962	-		GFF4783	0.74	-0.1
4,777,963	-		GFF4783	0.74	-1.4
4,777,963	-		GFF4783	0.74	-1.2
4,777,989	+		GFF4783	0.75	-0.8
4,777,991	+		GFF4783	0.75	+0.5
4,777,991	+		GFF4783	0.75	+0.0
4,777,999	-		GFF4783	0.75	-0.8
4,777,999	-		GFF4783	0.75	-0.5
4,778,019	-		GFF4783	0.75	-0.1
4,778,030	+		GFF4783	0.76	-0.4
4,778,037	+		GFF4783	0.76	-0.4
4,778,038	-		GFF4783	0.76	-0.8
4,778,062	-		GFF4783	0.77	+0.6
4,778,064	+		GFF4783	0.77	-1.9
4,778,071	+		GFF4783	0.77	-0.6
4,778,082	+		GFF4783	0.77	-1.2
4,778,097	+		GFF4783	0.78	-1.0
4,778,097	+		GFF4783	0.78	-1.4
4,778,097	+		GFF4783	0.78	+0.7
4,778,105	+		GFF4783	0.78	-0.4
4,778,113	-		GFF4783	0.78	-1.9
4,778,113	-		GFF4783	0.78	-0.4
4,778,113	-		GFF4783	0.78	-0.1
4,778,114	+		GFF4783	0.78	-0.8
4,778,143	-		GFF4783	0.79	-1.3
4,778,148	-		GFF4783	0.79	+0.8
4,778,148	-		GFF4783	0.79	+0.0
4,778,148	-		GFF4783	0.79	-0.1
4,778,164	+		GFF4783	0.79	+0.2
4,778,164	+		GFF4783	0.79	+0.4
4,778,172	-		GFF4783	0.80	-1.2
4,778,189	+		GFF4783	0.80	-1.3
4,778,189	+		GFF4783	0.80	+1.4
4,778,189	+		GFF4783	0.80	-0.3
4,778,189	+		GFF4783	0.80	-0.7
4,778,197	+		GFF4783	0.80	-0.5
4,778,197	-		GFF4783	0.80	-1.1
4,778,197	-		GFF4783	0.80	-1.2
4,778,197	-		GFF4783	0.80	+1.6
4,778,197	-		GFF4783	0.80	-0.2
4,778,197	-		GFF4783	0.80	+0.5
4,778,197	-		GFF4783	0.80	+0.0
4,778,197	-		GFF4783	0.80	-2.6
4,778,197	-		GFF4783	0.80	-1.1
4,778,197	-		GFF4783	0.80	-0.8
4,778,204	+		GFF4783	0.81	+0.0
4,778,206	+		GFF4783	0.81	-1.6
4,778,219	+		GFF4783	0.81	-1.2
4,778,224	+		GFF4783	0.81	-1.0
4,778,227	-		GFF4783	0.81	-0.5
4,778,232	-		GFF4783	0.81	-0.5
4,778,252	-		GFF4783	0.82	+0.2
4,778,253	-		GFF4783	0.82	-2.5
4,778,255	-		GFF4783	0.82	-1.4
4,778,284	+		GFF4783	0.83	+0.7
4,778,284	+		GFF4783	0.83	+0.9
4,778,284	+		GFF4783	0.83	-2.5
4,778,284	+		GFF4783	0.83	-2.2
4,778,284	+		GFF4783	0.83	+2.0
4,778,284	+		GFF4783	0.83	-0.3
4,778,284	+		GFF4783	0.83	-0.9
4,778,289	+		GFF4783	0.83	+0.4
4,778,292	+		GFF4783	0.83	-0.1
4,778,292	-		GFF4783	0.83	+0.0
4,778,292	-		GFF4783	0.83	-0.8
4,778,292	-		GFF4783	0.83	-0.4
4,778,292	-		GFF4783	0.83	-1.3
4,778,294	+		GFF4783	0.83	-1.5
4,778,294	+		GFF4783	0.83	-0.0
4,778,297	-		GFF4783	0.83	-2.4
4,778,297	-		GFF4783	0.83	-1.1
4,778,298	+		GFF4783	0.83	-0.8
4,778,302	-		GFF4783	0.83	-0.6
4,778,302	-		GFF4783	0.83	-1.0
4,778,302	-		GFF4783	0.83	-1.5
4,778,313	+		GFF4783	0.84	+0.0
4,778,313	+		GFF4783	0.84	-0.3
4,778,331	+		GFF4783	0.84	-2.3
4,778,339	-		GFF4783	0.84	-1.8
4,778,339	-		GFF4783	0.84	-2.0
4,778,339	-		GFF4783	0.84	-2.1
4,778,339	-		GFF4783	0.84	-2.6
4,778,339	-		GFF4783	0.84	-0.9
4,778,339	-		GFF4783	0.84	-0.1
4,778,339	-		GFF4783	0.84	-1.2
4,778,375	-		GFF4783	0.85	-1.5
4,778,383	-		GFF4783	0.86	-2.1
4,778,391	+		GFF4783	0.86	-0.1
4,778,399	-		GFF4783	0.86	+0.4
4,778,399	-		GFF4783	0.86	-2.4
4,778,410	-		GFF4783	0.86	+1.1
4,778,414	+		GFF4783	0.86	-0.2
4,778,420	-		GFF4783	0.87	+0.1
4,778,422	-		GFF4783	0.87	+0.6
4,778,448	+		GFF4783	0.87	-1.0
4,778,451	+		GFF4783	0.87	-0.5
4,778,453	-		GFF4783	0.88	-0.6
4,778,453	-		GFF4783	0.88	-0.5
4,778,459	-		GFF4783	0.88	-0.8
4,778,464	+		GFF4783	0.88	+0.7
4,778,464	+		GFF4783	0.88	-1.1
4,778,472	-		GFF4783	0.88	-0.3
4,778,473	+		GFF4783	0.88	-1.9
4,778,486	+		GFF4783	0.88	-1.8
4,778,486	+		GFF4783	0.88	-1.8
4,778,513	-		GFF4783	0.89	-2.8
4,778,516	+		GFF4783	0.89	-1.0
4,778,518	-		GFF4783	0.89	-0.6
4,778,518	-		GFF4783	0.89	-0.4
4,778,518	-		GFF4783	0.89	-0.1
4,778,518	-		GFF4783	0.89	-1.5
4,778,547	+				-1.4
4,778,547	-				-0.3
4,778,592	+				-0.6
4,778,592	+				-0.8
4,778,600	-				-1.5
4,778,600	-				+0.3
4,778,600	-				-0.9
4,778,604	+				-3.0
4,778,612	-				-1.0
4,778,672	+				-1.6
4,778,674	-				-3.2
4,778,680	-				-0.7
4,778,693	+				-2.6
4,778,706	-				+0.4
4,778,706	-				-0.9
4,778,722	+				-1.9
4,778,725	-				-1.2
4,778,754	+				-0.2
4,778,786	-				-0.5
4,778,798	-				-1.3
4,778,811	+				-0.1
4,778,819	-				-0.2
4,778,819	-				+0.4
4,778,819	-				+0.1
4,778,821	+				-1.8
4,778,823	+				-0.9
4,778,823	+				-1.1
4,778,823	+				-0.6
4,778,826	-				-1.8
4,778,829	-				-2.0
4,778,831	-				-1.2
4,778,857	+				+0.4
4,778,857	+				-1.6
4,778,857	+				-1.1
4,778,865	-				-1.1
4,778,883	+				-0.2
4,778,902	-				-0.1
4,778,905	+				-0.8
4,778,913	+				+0.4
4,778,924	-				+0.3
4,778,936	+				-0.5
4,778,936	+				-0.8
4,778,944	-				+0.6
4,778,954	+				-1.2
4,778,976	+				-1.3
4,778,984	-				-1.1
4,778,984	-				-0.4
4,778,991	+				+0.6
4,778,991	+				-0.9
4,778,991	+				-0.8
4,778,991	+				-0.4
4,778,991	+				+0.9
4,778,991	+				-0.6
4,778,991	+				-2.1
4,778,991	+				-2.2
4,778,991	+				-0.1
4,778,991	+				-1.5
4,778,994	-		GFF4784	0.11	-1.2
4,778,999	-		GFF4784	0.12	-1.8
4,778,999	-		GFF4784	0.12	-2.0
4,778,999	-		GFF4784	0.12	-0.4
4,778,999	-		GFF4784	0.12	-1.4
4,778,999	-		GFF4784	0.12	-0.9
4,778,999	-		GFF4784	0.12	+1.3
4,778,999	-		GFF4784	0.12	+0.2
4,778,999	-		GFF4784	0.12	-2.1
4,778,999	-		GFF4784	0.12	-1.4
4,778,999	-		GFF4784	0.12	-0.4
4,778,999	-		GFF4784	0.12	+0.2
4,779,001	+		GFF4784	0.12	-3.1
4,779,002	+		GFF4784	0.12	-0.1
4,779,027	+		GFF4784	0.18	-0.8
4,779,027	+		GFF4784	0.18	-0.9
4,779,035	-		GFF4784	0.19	-0.5
4,779,045	-		GFF4784	0.22	-2.1
4,779,045	-		GFF4784	0.22	-2.5
4,779,045	-		GFF4784	0.22	-1.6
4,779,045	-		GFF4784	0.22	-0.4
4,779,053	+		GFF4784	0.23	+0.0
4,779,068	-		GFF4784	0.26	-0.8
4,779,133	+		GFF4784	0.40	-2.2
4,779,141	-		GFF4784	0.42	+0.4
4,779,160	+		GFF4784	0.46	-0.0
4,779,212	+		GFF4784	0.57	-1.6
4,779,212	+		GFF4784	0.57	-1.6
4,779,212	+		GFF4784	0.57	-0.1
4,779,217	+		GFF4784	0.58	-0.8
4,779,220	-		GFF4784	0.59	+0.1
4,779,220	-		GFF4784	0.59	+0.1
4,779,220	-		GFF4784	0.59	-1.1
4,779,220	-		GFF4784	0.59	-0.8
4,779,220	-		GFF4784	0.59	-1.3
4,779,220	-		GFF4784	0.59	-0.2
4,779,220	-		GFF4784	0.59	+0.6
4,779,220	-		GFF4784	0.59	-1.0
4,779,220	-		GFF4784	0.59	-0.1
4,779,220	-		GFF4784	0.59	-0.3
4,779,225	-		GFF4784	0.60	-0.4
4,779,226	-		GFF4784	0.60	-0.7
4,779,226	-		GFF4784	0.60	-0.1
4,779,238	-		GFF4784	0.63	-0.1
4,779,251	+		GFF4784	0.66	-0.7
4,779,259	-		GFF4784	0.68	-0.7
4,779,259	-		GFF4784	0.68	+0.2
4,779,259	-		GFF4784	0.68	+0.2
4,779,259	-		GFF4784	0.68	-2.0
4,779,259	-		GFF4784	0.68	-0.3
4,779,266	+		GFF4784	0.69	-0.1
4,779,266	+		GFF4784	0.69	+0.1
4,779,276	+		GFF4784	0.71	-3.3
4,779,279	-		GFF4784	0.72	+0.5
4,779,279	-		GFF4784	0.72	+0.3
4,779,303	-		GFF4784	0.77	-0.3
4,779,313	-		GFF4784	0.79	-1.2
4,779,313	-		GFF4784	0.79	-1.3
4,779,336	-		GFF4784	0.84	-0.1
4,779,336	-		GFF4784	0.84	-1.0
4,779,336	-		GFF4784	0.84	-0.7
4,779,345	+		GFF4784	0.86	-0.1
4,779,347	+		GFF4784	0.86	+0.3
4,779,365	+				-2.4
4,779,373	-				-0.2
4,779,389	-				-0.2
4,779,389	-				+0.5
4,779,389	-				-0.9
4,779,389	-				-0.4
4,779,393	+				+0.3
4,779,406	+				-1.7
4,779,538	-				-0.4
4,779,557	+				-2.8
4,779,568	-				-0.9
4,779,570	+				-0.2
4,779,570	+				-1.0
4,779,578	-				-0.2
4,779,602	+				+0.5
4,779,615	+				-1.3
4,779,628	-		GFF4785	0.11	-1.2
4,779,630	+		GFF4785	0.11	-2.7
4,779,654	+		GFF4785	0.14	-1.9
4,779,675	+		GFF4785	0.16	-1.4
4,779,675	+		GFF4785	0.16	-1.5
4,779,726	+		GFF4785	0.22	-2.8
4,779,726	+		GFF4785	0.22	+0.4
4,779,731	+		GFF4785	0.23	-0.4
4,779,734	-		GFF4785	0.23	-2.0
4,779,752	-		GFF4785	0.25	-2.1
4,779,758	-		GFF4785	0.26	-1.1
4,779,771	+		GFF4785	0.27	-2.8
4,779,780	-		GFF4785	0.28	+0.0
4,779,788	+		GFF4785	0.29	-2.0
4,779,788	+		GFF4785	0.29	-0.2
4,779,793	+		GFF4785	0.30	-2.6
4,779,793	+		GFF4785	0.30	-0.2
4,779,793	+		GFF4785	0.30	+0.6
4,779,793	+		GFF4785	0.30	-2.8
4,779,794	+		GFF4785	0.30	-2.2
4,779,794	+		GFF4785	0.30	-1.2
4,779,794	+		GFF4785	0.30	-1.1
4,779,794	+		GFF4785	0.30	-1.8
4,779,796	-		GFF4785	0.30	-1.0
4,779,796	-		GFF4785	0.30	-0.3
4,779,798	+		GFF4785	0.30	-1.0
4,779,799	+		GFF4785	0.30	+0.0
4,779,801	-		GFF4785	0.30	-0.6
4,779,801	-		GFF4785	0.30	-2.2
4,779,801	-		GFF4785	0.30	-1.8
4,779,802	-		GFF4785	0.31	-0.4
4,779,802	-		GFF4785	0.31	-0.2
4,779,804	+		GFF4785	0.31	-3.0
4,779,807	-		GFF4785	0.31	+0.2
4,779,807	-		GFF4785	0.31	-0.4
4,779,807	-		GFF4785	0.31	-0.3
4,779,886	+		GFF4785	0.40	-0.3
4,779,894	-		GFF4785	0.41	-0.2
4,779,897	+		GFF4785	0.41	-0.8
4,779,907	+		GFF4785	0.42	+0.5
4,779,907	+		GFF4785	0.42	-1.4
4,779,915	-		GFF4785	0.43	-0.1
4,779,915	-		GFF4785	0.43	-0.8
4,779,915	-		GFF4785	0.43	-1.3
4,779,915	-		GFF4785	0.43	-0.7
4,779,915	-		GFF4785	0.43	+0.3
4,779,915	-		GFF4785	0.43	-3.0
4,779,915	-		GFF4785	0.43	-0.4
4,779,915	-		GFF4785	0.43	+0.0
4,779,915	-		GFF4785	0.43	-1.4
4,779,915	-		GFF4785	0.43	-2.2
4,779,917	+		GFF4785	0.43	+0.5
4,779,920	-		GFF4785	0.44	-1.4
4,779,920	-		GFF4785	0.44	-0.8
4,779,920	-		GFF4785	0.44	-0.9
4,779,925	-		GFF4785	0.44	+0.0
4,779,932	+		GFF4785	0.45	+0.6
4,779,932	+		GFF4785	0.45	-1.2
4,779,932	+		GFF4785	0.45	-1.0
4,779,932	+		GFF4785	0.45	-0.9
4,779,932	+		GFF4785	0.45	-0.3
4,779,932	+		GFF4785	0.45	-1.2
4,779,932	+		GFF4785	0.45	-0.1
4,779,932	+		GFF4785	0.45	-1.5
4,779,932	+		GFF4785	0.45	-0.1
4,779,932	+		GFF4785	0.45	+0.4
4,779,932	+		GFF4785	0.45	-0.9
4,779,932	+		GFF4785	0.45	-1.8
4,779,940	-		GFF4785	0.46	+0.3
4,779,940	-		GFF4785	0.46	-1.6
4,779,940	-		GFF4785	0.46	+0.0
4,779,940	-		GFF4785	0.46	-1.3
4,779,940	-		GFF4785	0.46	-3.2
4,779,940	-		GFF4785	0.46	-0.3
4,779,940	-		GFF4785	0.46	-1.4
4,779,940	-		GFF4785	0.46	+0.5
4,779,940	-		GFF4785	0.46	-0.1
4,779,940	-		GFF4785	0.46	-0.1
4,779,940	-		GFF4785	0.46	-1.7
4,779,940	-		GFF4785	0.46	-0.6
4,779,940	-		GFF4785	0.46	-1.4
4,779,940	-		GFF4785	0.46	-0.2
4,779,940	-		GFF4785	0.46	-1.5
4,779,940	-		GFF4785	0.46	+0.2
4,779,940	-		GFF4785	0.46	-0.6
4,779,940	-		GFF4785	0.46	-1.3
4,779,975	+		GFF4785	0.50	-0.6
4,779,983	-		GFF4785	0.51	-1.6
4,780,007	-		GFF4785	0.53	+0.2
4,780,010	+		GFF4785	0.54	-1.3
4,780,018	-		GFF4785	0.55	+0.3
4,780,026	-		GFF4785	0.56	+0.4
4,780,028	+		GFF4785	0.56	+0.4
4,780,036	-		GFF4785	0.57	-0.6
4,780,036	-		GFF4785	0.57	-2.4
4,780,036	-		GFF4785	0.57	+1.1
4,780,036	-		GFF4785	0.57	+0.2
4,780,038	+		GFF4785	0.57	-1.9
4,780,038	+		GFF4785	0.57	-1.7
4,780,046	-		GFF4785	0.58	-1.5
4,780,046	-		GFF4785	0.58	-3.1
4,780,046	-		GFF4785	0.58	+0.4
4,780,046	-		GFF4785	0.58	-0.9
4,780,073	+		GFF4785	0.61	-0.4
4,780,075	-		GFF4785	0.61	-2.0
4,780,130	-		GFF4785	0.67	+0.9
4,780,130	-		GFF4785	0.67	-2.0
4,780,130	-		GFF4785	0.67	-0.9
4,780,133	+		GFF4785	0.68	+1.2
4,780,148	+		GFF4785	0.69	-0.8
4,780,150	+		GFF4785	0.69	+0.3
4,780,186	+		GFF4785	0.73	-2.0
4,780,186	+		GFF4785	0.73	-0.4
4,780,186	+		GFF4785	0.73	-0.6
4,780,194	-		GFF4785	0.74	-0.3
4,780,194	-		GFF4785	0.74	+0.6
4,780,194	-		GFF4785	0.74	-1.4
4,780,194	-		GFF4785	0.74	-1.0
4,780,197	-		GFF4785	0.75	+0.0
4,780,200	+		GFF4785	0.75	-2.1
4,780,200	+		GFF4785	0.75	-1.9
4,780,212	+		GFF4785	0.76	-0.5
4,780,213	-		GFF4785	0.77	-1.9
4,780,213	-		GFF4785	0.77	-0.9
4,780,213	-		GFF4785	0.77	-0.3
4,780,234	+		GFF4785	0.79	-0.7
4,780,236	+		GFF4785	0.79	-1.5
4,780,237	-		GFF4785	0.79	-2.1
4,780,241	+		GFF4785	0.80	-0.6
4,780,242	-		GFF4785	0.80	+0.4
4,780,244	-		GFF4785	0.80	+0.0
4,780,249	-		GFF4785	0.81	-0.9
4,780,253	+		GFF4785	0.81	-0.5
4,780,271	-		GFF4785	0.83	+1.1
4,780,278	-		GFF4785	0.84	-0.1
4,780,278	-		GFF4785	0.84	-0.3
4,780,297	-		GFF4785	0.86	-0.8
4,780,297	-		GFF4785	0.86	-0.2
4,780,302	-		GFF4785	0.86	-0.8
4,780,316	-		GFF4785	0.88	+1.2
4,780,338	-				-0.6
4,780,342	+				+0.1
4,780,342	+				-2.4
4,780,348	-				-0.8
4,780,358	-				-2.8
4,780,370	+				-2.0
4,780,383	+				-0.9
4,780,394	+				-1.5