Strain Fitness in Sphingobium sp. HT1-2 around GFF4683

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,681,399	+		GFF4682	0.61	+0.2
4,681,420	+		GFF4682	0.62	+0.4
4,681,420	+		GFF4682	0.62	-0.9
4,681,431	+		GFF4682	0.63	-0.0
4,681,457	+		GFF4682	0.64	-0.3
4,681,465	-		GFF4682	0.64	+1.2
4,681,469	+		GFF4682	0.64	+1.1
4,681,477	-		GFF4682	0.64	+0.6
4,681,504	+		GFF4682	0.66	-0.9
4,681,504	+		GFF4682	0.66	+0.4
4,681,539	+		GFF4682	0.67	+0.7
4,681,539	+		GFF4682	0.67	+0.3
4,681,539	+		GFF4682	0.67	+0.4
4,681,539	+		GFF4682	0.67	+1.2
4,681,539	+		GFF4682	0.67	+1.2
4,681,539	+		GFF4682	0.67	+0.1
4,681,539	+		GFF4682	0.67	+0.6
4,681,544	+		GFF4682	0.67	+0.2
4,681,547	-		GFF4682	0.67	+1.2
4,681,547	-		GFF4682	0.67	+1.0
4,681,547	-		GFF4682	0.67	-0.8
4,681,547	-		GFF4682	0.67	+0.6
4,681,547	-		GFF4682	0.67	-2.0
4,681,552	-		GFF4682	0.68	+1.2
4,681,552	-		GFF4682	0.68	+0.4
4,681,552	-		GFF4682	0.68	+1.3
4,681,557	-		GFF4682	0.68	+1.0
4,681,557	-		GFF4682	0.68	+1.3
4,681,573	+		GFF4682	0.68	+1.0
4,681,612	+		GFF4682	0.70	-0.8
4,681,612	+		GFF4682	0.70	+0.7
4,681,620	-		GFF4682	0.70	+1.5
4,681,620	-		GFF4682	0.70	+0.4
4,681,620	-		GFF4682	0.70	+0.6
4,681,626	+		GFF4682	0.71	-0.1
4,681,631	+		GFF4682	0.71	-0.1
4,681,639	-		GFF4682	0.71	+0.4
4,681,640	+		GFF4682	0.71	-0.4
4,681,648	-		GFF4682	0.72	-1.8
4,681,669	+		GFF4682	0.73	-0.5
4,681,670	+		GFF4682	0.73	+0.1
4,681,678	-		GFF4682	0.73	+0.6
4,681,678	-		GFF4682	0.73	+0.3
4,681,678	-		GFF4682	0.73	+0.3
4,681,701	+		GFF4682	0.74	-1.1
4,681,709	-		GFF4682	0.74	-0.8
4,681,743	+		GFF4682	0.76	+1.1
4,681,743	+		GFF4682	0.76	+1.1
4,681,743	+		GFF4682	0.76	-1.7
4,681,751	-		GFF4682	0.76	-0.4
4,681,751	-		GFF4682	0.76	-0.1
4,681,751	-		GFF4682	0.76	+2.0
4,681,753	+		GFF4682	0.76	-2.0
4,681,757	-		GFF4682	0.76	+0.3
4,681,757	-		GFF4682	0.76	+0.6
4,681,757	-		GFF4682	0.76	-0.2
4,681,777	-		GFF4682	0.77	+0.1
4,681,787	+		GFF4682	0.77	+0.3
4,681,792	+		GFF4682	0.78	-0.6
4,681,795	-		GFF4682	0.78	+0.3
4,681,825	+		GFF4682	0.79	+1.0
4,681,825	+		GFF4682	0.79	+0.7
4,681,825	+		GFF4682	0.79	-1.5
4,681,825	+		GFF4682	0.79	+0.6
4,681,825	+		GFF4682	0.79	+0.4
4,681,825	+		GFF4682	0.79	+1.6
4,681,827	+		GFF4682	0.79	-0.5
4,681,827	+		GFF4682	0.79	+0.7
4,681,827	+		GFF4682	0.79	-0.3
4,681,827	+		GFF4682	0.79	-0.6
4,681,827	+		GFF4682	0.79	-1.1
4,681,827	+		GFF4682	0.79	-0.0
4,681,827	+		GFF4682	0.79	+0.7
4,681,827	+		GFF4682	0.79	-1.9
4,681,827	+		GFF4682	0.79	+0.3
4,681,827	+		GFF4682	0.79	-1.6
4,681,827	+		GFF4682	0.79	+2.1
4,681,833	-		GFF4682	0.79	+0.8
4,681,835	-		GFF4682	0.79	+0.4
4,681,835	-		GFF4682	0.79	+0.6
4,681,835	-		GFF4682	0.79	-0.2
4,681,835	-		GFF4682	0.79	+1.1
4,681,835	-		GFF4682	0.79	+0.5
4,681,835	-		GFF4682	0.79	-0.0
4,681,835	-		GFF4682	0.79	+0.1
4,681,835	-		GFF4682	0.79	+0.9
4,681,835	-		GFF4682	0.79	+0.0
4,681,835	-		GFF4682	0.79	-1.6
4,681,865	-		GFF4682	0.81	+1.5
4,681,865	-		GFF4682	0.81	-0.5
4,681,894	+		GFF4682	0.82	-1.9
4,681,923	+		GFF4682	0.83	-0.2
4,681,923	+		GFF4682	0.83	-0.6
4,681,923	+		GFF4682	0.83	-0.6
4,681,923	+		GFF4682	0.83	+1.4
4,681,923	+		GFF4682	0.83	-0.9
4,681,923	+		GFF4682	0.83	-1.1
4,681,923	+		GFF4682	0.83	-0.1
4,681,923	+		GFF4682	0.83	+0.1
4,681,923	+		GFF4682	0.83	+0.6
4,681,923	+		GFF4682	0.83	+0.4
4,681,923	+		GFF4682	0.83	+0.2
4,681,923	+		GFF4682	0.83	-0.8
4,681,923	+		GFF4682	0.83	+0.0
4,681,929	-		GFF4682	0.83	-0.8
4,681,931	-		GFF4682	0.84	-1.5
4,681,931	-		GFF4682	0.84	+0.2
4,681,931	-		GFF4682	0.84	+0.1
4,681,931	-		GFF4682	0.84	-2.6
4,681,931	-		GFF4682	0.84	+0.8
4,681,931	-		GFF4682	0.84	+1.3
4,681,931	-		GFF4682	0.84	+1.4
4,681,931	-		GFF4682	0.84	+1.1
4,681,931	-		GFF4682	0.84	+0.8
4,681,931	-		GFF4682	0.84	+0.6
4,681,936	-		GFF4682	0.84	-0.3
4,681,936	-		GFF4682	0.84	-1.1
4,681,936	-		GFF4682	0.84	-0.5
4,681,936	-		GFF4682	0.84	-0.0
4,681,938	+		GFF4682	0.84	-0.2
4,681,938	+		GFF4682	0.84	+0.8
4,681,938	+		GFF4682	0.84	+1.5
4,681,938	+		GFF4682	0.84	+0.8
4,681,938	+		GFF4682	0.84	-0.6
4,681,941	-		GFF4682	0.84	-0.2
4,681,986	+		GFF4682	0.86	-1.2
4,682,000	-		GFF4682	0.86	+0.5
4,682,010	+		GFF4682	0.87	-0.7
4,682,018	-		GFF4682	0.87	-1.0
4,682,042	+		GFF4682	0.88	+0.4
4,682,043	-		GFF4682	0.88	+0.2
4,682,050	-		GFF4682	0.88	+1.1
4,682,056	+		GFF4682	0.89	-0.9
4,682,064	-		GFF4682	0.89	-0.6
4,682,107	+				-1.1
4,682,110	+				+0.6
4,682,115	-				+0.6
4,682,115	-				-0.3
4,682,115	-				+0.6
4,682,115	-				+1.6
4,682,130	-				-0.5
4,682,166	-				-0.0
4,682,209	+				+1.1
4,682,214	+				+0.6
4,682,214	+				-0.4
4,682,214	+				-0.1
4,682,214	+				-0.2
4,682,222	-				-0.7
4,682,222	-				-1.2
4,682,222	-				+0.3
4,682,222	-				+0.1
4,682,222	-				+0.4
4,682,232	+				-1.5
4,682,253	-				-0.5
4,682,284	+				+2.0
4,682,289	+				-0.6
4,682,292	-				-2.0
4,682,302	-				-0.7
4,682,303	-				+0.9
4,682,307	+				-2.1
4,682,333	-				-0.4
4,682,338	-				+0.6
4,682,359	+				+1.2
4,682,380	+				+1.0
4,682,388	-				+0.8
4,682,401	+				+0.4
4,682,409	-				+0.0
4,682,409	-				+1.2
4,682,460	+		GFF4683	0.44	-0.8
4,682,468	-		GFF4683	0.50	+2.0
4,682,505	+		GFF4683	0.77	-0.4
4,682,505	+		GFF4683	0.77	-0.9
4,682,515	+		GFF4683	0.84	-0.1
4,682,523	-				+0.0
4,682,523	-				-1.0
4,682,561	-				+0.9
4,682,561	-				+0.5
4,682,561	-				-0.9
4,682,563	+				-0.3
4,682,573	-				+0.9
4,682,594	-				+1.7
4,682,598	-				-0.5
4,682,598	-				-2.4
4,682,621	+				+1.4
4,682,623	-				-2.5
4,682,638	-				+0.6
4,682,638	-				+0.1
4,682,643	+				-0.1
4,682,643	+				+0.9
4,682,643	+				+0.8
4,682,643	+				+0.5
4,682,643	+				+0.6
4,682,644	+				-1.9
4,682,651	-				+1.1
4,682,651	-				-2.1
4,682,651	-				+0.6
4,682,651	-				+0.5
4,682,651	-				-1.5
4,682,651	-				-2.1
4,682,653	+				-1.6
4,682,653	+				-1.4
4,682,654	+				-0.8
4,682,654	+				+0.4
4,682,654	+				-0.6
4,682,661	-				+0.5
4,682,662	-				+0.1
4,682,662	-				+1.0
4,682,667	+				-0.0
4,682,667	+				-0.6
4,682,667	+				-0.1
4,682,675	-				+1.1
4,682,675	-				-0.3
4,682,675	-				-0.1
4,682,688	+				-0.8
4,682,696	-				+1.0
4,682,698	+				-0.7
4,682,698	+				-0.2
4,682,698	+				+0.4
4,682,698	+				+0.2
4,682,698	+				+1.4
4,682,706	-				+0.4
4,682,706	-				+0.1
4,682,719	+				-0.3
4,682,775	+				-1.9
4,682,775	+				+0.2
4,682,775	+				+0.6
4,682,775	+				+0.7
4,682,775	+				+0.2
4,682,775	+				+0.1
4,682,775	+				+1.4
4,682,775	+				+1.6
4,682,775	+				-0.2
4,682,775	+				+0.6
4,682,776	-				+1.2
4,682,780	+				-1.6
4,682,783	-				+1.1
4,682,783	-				+0.8
4,682,783	-				+0.2
4,682,783	-				-0.6
4,682,783	-				-0.5
4,682,783	-				+2.0
4,682,783	-				+0.3
4,682,783	-				-1.7
4,682,783	-				+2.4
4,682,783	-				-2.4
4,682,783	-				+0.5
4,682,783	-				-0.3
4,682,783	-				-0.2
4,682,783	-				+0.3
4,682,783	-				+1.6
4,682,785	+				-1.5
4,682,785	+				+1.0
4,682,785	+				+2.3
4,682,816	+				-0.1
4,682,816	+				-1.0
4,682,816	+				+0.3
4,682,828	+				+0.2
4,682,846	+				+1.1
4,682,846	+				-0.5
4,682,846	+				-0.5
4,682,846	+				-0.5
4,682,846	+				+0.8
4,682,846	+				-0.0
4,682,846	+				-0.2
4,682,846	+				+0.9
4,682,851	-				-0.4
4,682,854	-				+0.3
4,682,854	-				+0.1
4,682,854	-				-1.7
4,682,854	-				-0.4
4,682,931	+				+0.4
4,682,931	+				+0.6
4,682,957	-				-0.5
4,682,957	-				-0.6
4,682,996	-				+0.1
4,683,001	-				+0.6
4,683,019	+		GFF4684	0.10	-0.8
4,683,027	+		GFF4684	0.10	+0.6
4,683,027	+		GFF4684	0.10	-1.6
4,683,027	-		GFF4684	0.10	-2.5
4,683,036	+		GFF4684	0.11	-1.7
4,683,065	+		GFF4684	0.12	+2.2
4,683,092	-		GFF4684	0.13	+0.6
4,683,092	-		GFF4684	0.13	+0.8
4,683,110	+		GFF4684	0.13	+0.2
4,683,117	+		GFF4684	0.13	-0.4
4,683,117	+		GFF4684	0.13	+0.2
4,683,121	+		GFF4684	0.14	-0.3
4,683,129	-		GFF4684	0.14	-0.8
4,683,129	-		GFF4684	0.14	-0.1
4,683,175	+		GFF4684	0.16	-1.4
4,683,183	-		GFF4684	0.16	-1.6
4,683,197	+		GFF4684	0.16	-0.6
4,683,199	+		GFF4684	0.16	-0.5
4,683,199	+		GFF4684	0.16	-1.2
4,683,207	-		GFF4684	0.17	+0.9
4,683,207	-		GFF4684	0.17	+0.7
4,683,248	-		GFF4684	0.18	-0.3
4,683,268	+		GFF4684	0.19	+0.1
4,683,271	-		GFF4684	0.19	-1.9
4,683,276	-		GFF4684	0.19	+0.2
4,683,291	+		GFF4684	0.20	-0.7
4,683,300	+		GFF4684	0.20	+0.1
4,683,301	+		GFF4684	0.20	-0.1
4,683,345	+		GFF4684	0.21	-0.1
4,683,345	-		GFF4684	0.21	-2.0
4,683,389	-		GFF4684	0.23	+0.4
4,683,399	+		GFF4684	0.23	+0.4
4,683,399	+		GFF4684	0.23	+0.3
4,683,399	+		GFF4684	0.23	+0.2
4,683,401	-		GFF4684	0.23	+1.0
4,683,407	-		GFF4684	0.24	-0.7
4,683,407	-		GFF4684	0.24	+0.4
4,683,407	-		GFF4684	0.24	-1.9
4,683,407	-		GFF4684	0.24	-0.1
4,683,446	-		GFF4684	0.25	-0.6
4,683,448	+		GFF4684	0.25	+0.1
4,683,475	-		GFF4684	0.26	+0.3
4,683,480	-		GFF4684	0.26	+0.3
4,683,485	+		GFF4684	0.26	+0.7
4,683,485	+		GFF4684	0.26	+0.2
4,683,485	+		GFF4684	0.26	+0.6
4,683,485	+		GFF4684	0.26	+2.4
4,683,485	+		GFF4684	0.26	+0.6
4,683,493	-		GFF4684	0.27	+1.6
4,683,493	-		GFF4684	0.27	+0.5
4,683,495	-		GFF4684	0.27	-2.1
4,683,528	+		GFF4684	0.28	+0.8
4,683,528	+		GFF4684	0.28	+1.0
4,683,528	+		GFF4684	0.28	-0.9
4,683,536	-		GFF4684	0.28	+0.4
4,683,536	-		GFF4684	0.28	-0.2