Strain Fitness in Sphingobium sp. HT1-2 around GFF4386

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,385,872	-		GFF4385	0.20	-0.2
4,385,888	-		GFF4385	0.22	+0.1
4,385,888	-		GFF4385	0.22	-0.7
4,385,900	+		GFF4385	0.23	-0.1
4,385,908	-		GFF4385	0.23	-2.6
4,385,908	-		GFF4385	0.23	+0.1
4,385,908	-		GFF4385	0.23	-0.0
4,385,933	-		GFF4385	0.25	-1.7
4,385,933	-		GFF4385	0.25	-0.2
4,385,962	-		GFF4385	0.28	-0.9
4,385,970	+		GFF4385	0.28	-0.7
4,385,977	+		GFF4385	0.29	-0.2
4,385,979	+		GFF4385	0.29	+0.9
4,385,985	-		GFF4385	0.30	-0.6
4,385,985	-		GFF4385	0.30	+0.2
4,385,994	+		GFF4385	0.30	+0.5
4,386,002	-		GFF4385	0.31	-0.9
4,386,006	+		GFF4385	0.31	-0.1
4,386,008	+		GFF4385	0.31	-0.3
4,386,014	-		GFF4385	0.32	-3.1
4,386,014	-		GFF4385	0.32	-2.2
4,386,023	+		GFF4385	0.33	-0.3
4,386,024	-		GFF4385	0.33	+0.7
4,386,028	+		GFF4385	0.33	-1.7
4,386,041	-		GFF4385	0.34	+0.5
4,386,043	+		GFF4385	0.34	-0.2
4,386,043	+		GFF4385	0.34	-0.0
4,386,043	+		GFF4385	0.34	-2.0
4,386,043	+		GFF4385	0.34	-0.5
4,386,043	+		GFF4385	0.34	+0.8
4,386,051	-		GFF4385	0.35	-0.5
4,386,074	+		GFF4385	0.37	+0.4
4,386,097	+		GFF4385	0.39	-2.3
4,386,097	+		GFF4385	0.39	-0.3
4,386,097	+		GFF4385	0.39	+0.2
4,386,099	+		GFF4385	0.39	+0.6
4,386,099	+		GFF4385	0.39	-1.5
4,386,105	-		GFF4385	0.39	-0.4
4,386,107	-		GFF4385	0.39	-0.2
4,386,107	-		GFF4385	0.39	-1.6
4,386,107	-		GFF4385	0.39	-0.2
4,386,107	-		GFF4385	0.39	-0.3
4,386,116	+		GFF4385	0.40	+0.3
4,386,125	+		GFF4385	0.41	-0.9
4,386,125	+		GFF4385	0.41	+0.2
4,386,125	+		GFF4385	0.41	-1.0
4,386,125	+		GFF4385	0.41	-0.7
4,386,125	+		GFF4385	0.41	+0.2
4,386,125	+		GFF4385	0.41	-0.7
4,386,125	+		GFF4385	0.41	-1.6
4,386,125	+		GFF4385	0.41	-1.7
4,386,125	+		GFF4385	0.41	-2.0
4,386,125	+		GFF4385	0.41	+0.6
4,386,125	+		GFF4385	0.41	-0.7
4,386,125	+		GFF4385	0.41	+0.1
4,386,125	+		GFF4385	0.41	-0.0
4,386,125	+		GFF4385	0.41	-0.2
4,386,125	+		GFF4385	0.41	+0.2
4,386,125	+		GFF4385	0.41	-1.2
4,386,128	-		GFF4385	0.41	-1.6
4,386,133	-		GFF4385	0.42	-2.6
4,386,133	-		GFF4385	0.42	+0.1
4,386,133	-		GFF4385	0.42	+0.6
4,386,133	-		GFF4385	0.42	-0.5
4,386,133	-		GFF4385	0.42	-0.0
4,386,133	-		GFF4385	0.42	-1.4
4,386,133	-		GFF4385	0.42	+0.0
4,386,133	-		GFF4385	0.42	-1.0
4,386,133	-		GFF4385	0.42	-0.9
4,386,133	-		GFF4385	0.42	+1.1
4,386,133	-		GFF4385	0.42	-0.3
4,386,133	-		GFF4385	0.42	-2.4
4,386,133	-		GFF4385	0.42	-0.2
4,386,133	-		GFF4385	0.42	-1.6
4,386,156	+		GFF4385	0.43	+0.1
4,386,168	+		GFF4385	0.44	-0.0
4,386,170	-		GFF4385	0.45	-0.2
4,386,174	+		GFF4385	0.45	+0.8
4,386,179	+		GFF4385	0.45	+0.1
4,386,182	-		GFF4385	0.46	+0.5
4,386,185	+		GFF4385	0.46	-0.3
4,386,195	+		GFF4385	0.47	+0.3
4,386,203	-		GFF4385	0.47	-0.5
4,386,212	+		GFF4385	0.48	+1.0
4,386,224	+		GFF4385	0.49	-1.6
4,386,230	-		GFF4385	0.49	-0.6
4,386,232	-		GFF4385	0.50	-0.2
4,386,237	+		GFF4385	0.50	+0.5
4,386,242	+		GFF4385	0.50	-2.4
4,386,250	-		GFF4385	0.51	-1.0
4,386,253	+		GFF4385	0.51	-0.1
4,386,259	-		GFF4385	0.52	+0.4
4,386,259	-		GFF4385	0.52	+0.2
4,386,259	-		GFF4385	0.52	+0.1
4,386,274	-		GFF4385	0.53	-0.8
4,386,278	+		GFF4385	0.53	-1.6
4,386,294	-		GFF4385	0.55	-0.0
4,386,294	-		GFF4385	0.55	-0.4
4,386,299	+		GFF4385	0.55	+0.2
4,386,304	+		GFF4385	0.55	-0.2
4,386,309	+		GFF4385	0.56	+0.4
4,386,309	+		GFF4385	0.56	-1.4
4,386,312	-		GFF4385	0.56	+0.2
4,386,317	-		GFF4385	0.57	-0.9
4,386,321	+		GFF4385	0.57	+0.7
4,386,329	+		GFF4385	0.58	-0.6
4,386,329	+		GFF4385	0.58	+0.3
4,386,329	+		GFF4385	0.58	+0.8
4,386,329	-		GFF4385	0.58	-0.1
4,386,329	-		GFF4385	0.58	-1.8
4,386,331	+		GFF4385	0.58	-0.9
4,386,331	+		GFF4385	0.58	+0.1
4,386,331	+		GFF4385	0.58	+0.2
4,386,337	-		GFF4385	0.58	+0.5
4,386,337	-		GFF4385	0.58	-0.9
4,386,339	-		GFF4385	0.58	-0.5
4,386,339	-		GFF4385	0.58	-0.0
4,386,339	-		GFF4385	0.58	+0.8
4,386,348	+		GFF4385	0.59	+1.3
4,386,354	-		GFF4385	0.60	-0.8
4,386,354	-		GFF4385	0.60	+0.5
4,386,354	-		GFF4385	0.60	+1.2
4,386,356	-		GFF4385	0.60	+0.1
4,386,367	-		GFF4385	0.61	-0.0
4,386,377	+		GFF4385	0.61	+0.4
4,386,378	+		GFF4385	0.61	-0.8
4,386,378	+		GFF4385	0.61	-0.4
4,386,379	-		GFF4385	0.62	-1.3
4,386,385	+		GFF4385	0.62	-2.0
4,386,386	-		GFF4385	0.62	-0.4
4,386,386	-		GFF4385	0.62	+0.1
4,386,387	-		GFF4385	0.62	+1.1
4,386,388	+		GFF4385	0.62	-0.7
4,386,388	+		GFF4385	0.62	+0.7
4,386,391	-		GFF4385	0.63	+0.7
4,386,396	-		GFF4385	0.63	-0.3
4,386,398	-		GFF4385	0.63	-0.1
4,386,401	-		GFF4385	0.63	-0.9
4,386,406	-		GFF4385	0.64	+0.1
4,386,410	+		GFF4385	0.64	-0.9
4,386,440	+		GFF4385	0.67	-0.0
4,386,440	+		GFF4385	0.67	-1.6
4,386,440	+		GFF4385	0.67	-0.4
4,386,440	+		GFF4385	0.67	-0.4
4,386,440	+		GFF4385	0.67	-2.9
4,386,448	-		GFF4385	0.67	+0.2
4,386,448	-		GFF4385	0.67	+0.4
4,386,448	-		GFF4385	0.67	-0.4
4,386,448	-		GFF4385	0.67	-0.4
4,386,448	-		GFF4385	0.67	-1.3
4,386,448	-		GFF4385	0.67	+0.1
4,386,464	-		GFF4385	0.68	-1.2
4,386,466	-		GFF4385	0.69	-1.3
4,386,487	+		GFF4385	0.70	-0.3
4,386,488	+		GFF4385	0.70	-0.6
4,386,492	+		GFF4385	0.71	-1.6
4,386,492	+		GFF4385	0.71	-1.1
4,386,492	+		GFF4385	0.71	+0.1
4,386,492	+		GFF4385	0.71	+0.5
4,386,495	-		GFF4385	0.71	+0.1
4,386,500	-		GFF4385	0.71	+0.1
4,386,505	-		GFF4385	0.72	+1.2
4,386,512	+		GFF4385	0.72	+0.8
4,386,512	+		GFF4385	0.72	+0.7
4,386,512	+		GFF4385	0.72	-0.5
4,386,520	-		GFF4385	0.73	-1.6
4,386,537	-		GFF4385	0.74	+1.1
4,386,576	+		GFF4385	0.78	+0.4
4,386,579	-		GFF4385	0.78	-1.5
4,386,579	-		GFF4385	0.78	-1.0
4,386,579	-		GFF4385	0.78	-0.4
4,386,584	-		GFF4385	0.78	-0.9
4,386,591	+		GFF4385	0.79	-0.6
4,386,602	+		GFF4385	0.80	-0.7
4,386,618	+		GFF4385	0.81	-0.1
4,386,619	+		GFF4385	0.81	-0.1
4,386,626	-		GFF4385	0.82	-1.9
4,386,636	+		GFF4385	0.82	-0.3
4,386,638	-		GFF4385	0.83	-1.2
4,386,644	-		GFF4385	0.83	-1.1
4,386,644	-		GFF4385	0.83	+0.1
4,386,664	-		GFF4385	0.85	-0.7
4,386,669	-		GFF4385	0.85	+0.7
4,386,681	-		GFF4385	0.86	+0.1
4,386,685	+		GFF4385	0.86	+0.1
4,386,710	+		GFF4385	0.88	+0.5
4,386,712	+		GFF4385	0.89	-1.8
4,386,717	+		GFF4385	0.89	-0.6
4,386,718	+		GFF4385	0.89	-1.4
4,386,719	+		GFF4385	0.89	+1.3
4,386,726	-		GFF4385	0.90	+0.7
4,386,726	-		GFF4385	0.90	-3.3
4,386,736	+				-0.5
4,386,753	+				-1.0
4,386,756	+				-1.0
4,386,765	+				+0.0
4,386,766	+				+0.1
4,386,768	-				+0.1
4,386,773	+				-0.7
4,386,773	+				-1.9
4,386,781	-				-1.1
4,386,791	-				-0.0
4,386,793	+				-1.0
4,386,796	-				+0.9
4,386,801	-				+0.7
4,386,803	+				+1.1
4,386,816	-				-1.0
4,386,816	-				+0.1
4,386,817	-				-0.8
4,386,821	-				-0.1
4,386,823	+				-0.8
4,386,843	-				-1.2
4,386,847	+				+0.1
4,386,857	+				-0.9
4,386,865	-				-0.3
4,386,871	-				-2.0
4,386,883	-		GFF4386	0.14	-0.1
4,386,887	-		GFF4386	0.15	+1.0
4,386,889	+		GFF4386	0.16	-1.5
4,386,897	-		GFF4386	0.19	-1.5
4,386,907	-		GFF4386	0.23	-1.1
4,386,909	-		GFF4386	0.24	-0.0
4,386,920	+		GFF4386	0.29	-0.6
4,386,920	+		GFF4386	0.29	+0.5
4,386,921	-		GFF4386	0.29	-0.8
4,386,928	-		GFF4386	0.32	-2.2
4,386,937	+		GFF4386	0.35	-0.5
4,386,937	+		GFF4386	0.35	+0.7
4,386,937	+		GFF4386	0.35	-2.0
4,386,937	+		GFF4386	0.35	-0.1
4,386,937	+		GFF4386	0.35	-1.4
4,386,939	+		GFF4386	0.36	-1.0
4,386,945	-		GFF4386	0.39	-1.4
4,386,945	-		GFF4386	0.39	-0.3
4,386,947	+		GFF4386	0.39	-1.5
4,386,947	-		GFF4386	0.39	-1.8
4,386,952	-		GFF4386	0.41	-0.6
4,386,954	+		GFF4386	0.42	+1.3
4,386,957	-		GFF4386	0.43	+0.4
4,386,967	+		GFF4386	0.47	-0.9
4,387,009	-		GFF4386	0.64	+0.1
4,387,035	-		GFF4386	0.75	+0.1
4,387,041	+		GFF4386	0.77	-0.9
4,387,049	-		GFF4386	0.80	-1.5
4,387,050	+		GFF4386	0.81	+0.7
4,387,059	+		GFF4386	0.84	-1.0
4,387,064	+		GFF4386	0.86	+1.0
4,387,064	+		GFF4386	0.86	-0.1
4,387,064	+		GFF4386	0.86	+1.5
4,387,064	+		GFF4386	0.86	-2.0
4,387,064	+		GFF4386	0.86	+0.1
4,387,064	+		GFF4386	0.86	-2.1
4,387,067	-		GFF4386	0.88	+0.1
4,387,072	-		GFF4386	0.90	-0.6
4,387,072	-		GFF4386	0.90	+0.3
4,387,072	-		GFF4386	0.90	-0.1
4,387,072	-		GFF4386	0.90	-2.1
4,387,072	-		GFF4386	0.90	-0.6
4,387,072	-		GFF4386	0.90	-1.6
4,387,072	-		GFF4386	0.90	-0.4
4,387,072	-		GFF4386	0.90	-0.2
4,387,072	-		GFF4386	0.90	-0.0
4,387,084	-				-1.5
4,387,133	-				-1.4
4,387,133	-				-0.1
4,387,161	+				-1.0
4,387,161	+				-0.9
4,387,161	+				-0.1
4,387,169	-				-0.0
4,387,169	-				+1.1
4,387,169	-				-0.7
4,387,172	+				+1.7
4,387,179	-				+0.0
4,387,180	-				+0.2
4,387,180	-				-0.5
4,387,180	-				-0.0
4,387,201	-				+0.4
4,387,204	+				+0.3
4,387,204	+				+0.6
4,387,226	+				+0.1
4,387,226	+				-1.3
4,387,226	+				-0.2
4,387,234	-				+0.1
4,387,234	-				-0.4
4,387,234	-				-2.9
4,387,234	-				-1.3
4,387,246	+				-1.0
4,387,256	+				-0.6
4,387,256	+				+0.7
4,387,258	+				-0.9
4,387,258	+				-0.2
4,387,261	+				+1.1
4,387,264	-				+0.5
4,387,264	-				-0.4
4,387,264	-				-0.0
4,387,271	+				-1.0
4,387,271	+				-1.6
4,387,285	+				-0.3
4,387,302	-		GFF4387	0.10	+0.5
4,387,317	+		GFF4387	0.11	+0.3
4,387,322	+		GFF4387	0.11	+0.2
4,387,325	-		GFF4387	0.12	-0.2
4,387,336	-		GFF4387	0.12	-1.4
4,387,337	+		GFF4387	0.12	-0.9
4,387,369	+		GFF4387	0.14	-1.0
4,387,369	+		GFF4387	0.14	-0.8
4,387,369	+		GFF4387	0.14	-1.7
4,387,369	+		GFF4387	0.14	-1.9
4,387,374	+		GFF4387	0.15	+0.2
4,387,377	-		GFF4387	0.15	-0.8
4,387,377	-		GFF4387	0.15	-0.5
4,387,405	+		GFF4387	0.16	+1.0
4,387,413	+		GFF4387	0.17	-0.1
4,387,413	-		GFF4387	0.17	+0.7
4,387,413	-		GFF4387	0.17	-0.9
4,387,414	+		GFF4387	0.17	+0.1
4,387,422	-		GFF4387	0.17	-1.5
4,387,423	-		GFF4387	0.17	-0.0
4,387,423	-		GFF4387	0.17	+0.1
4,387,458	-		GFF4387	0.20	-0.2
4,387,467	+		GFF4387	0.20	+0.8
4,387,472	+		GFF4387	0.20	+0.7
4,387,472	+		GFF4387	0.20	+1.0
4,387,475	-		GFF4387	0.21	-0.2
4,387,480	-		GFF4387	0.21	+0.6
4,387,480	-		GFF4387	0.21	-1.3
4,387,480	-		GFF4387	0.21	+0.1
4,387,480	-		GFF4387	0.21	-2.0
4,387,480	-		GFF4387	0.21	-0.2
4,387,487	+		GFF4387	0.21	+0.1
4,387,490	-		GFF4387	0.21	+0.0
4,387,529	-		GFF4387	0.24	-1.5
4,387,531	+		GFF4387	0.24	+0.8
4,387,531	+		GFF4387	0.24	+0.7
4,387,531	+		GFF4387	0.24	+0.1
4,387,539	-		GFF4387	0.24	-2.0
4,387,539	-		GFF4387	0.24	+0.3
4,387,539	-		GFF4387	0.24	+0.4
4,387,539	-		GFF4387	0.24	-1.0
4,387,539	-		GFF4387	0.24	-1.1
4,387,564	+		GFF4387	0.26	-2.4
4,387,586	+		GFF4387	0.27	-1.2
4,387,586	+		GFF4387	0.27	-0.5
4,387,586	+		GFF4387	0.27	+0.1
4,387,586	+		GFF4387	0.27	-1.7
4,387,586	+		GFF4387	0.27	-0.6
4,387,586	+		GFF4387	0.27	-0.2
4,387,586	+		GFF4387	0.27	-1.0
4,387,586	+		GFF4387	0.27	-1.0
4,387,586	+		GFF4387	0.27	-0.5
4,387,586	+		GFF4387	0.27	-0.5
4,387,594	-		GFF4387	0.28	-0.7
4,387,594	-		GFF4387	0.28	+0.4
4,387,594	-		GFF4387	0.28	-0.2
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