Strain Fitness in Sphingobium sp. HT1-2 around GFF4332

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,334,754	-		GFF4331	0.53	-0.3
4,334,756	-		GFF4331	0.53	+0.9
4,334,756	-		GFF4331	0.53	-2.2
4,334,756	-		GFF4331	0.53	-0.1
4,334,786	+		GFF4331	0.54	-0.2
4,334,811	+		GFF4331	0.55	+0.1
4,334,826	+		GFF4331	0.56	-2.0
4,334,851	-		GFF4331	0.57	+0.2
4,334,869	-		GFF4331	0.58	-0.3
4,334,871	-		GFF4331	0.58	-0.2
4,334,871	-		GFF4331	0.58	-0.6
4,334,871	-		GFF4331	0.58	-1.4
4,334,871	-		GFF4331	0.58	-1.9
4,334,946	+		GFF4331	0.62	+0.9
4,334,954	-		GFF4331	0.62	-0.5
4,334,954	-		GFF4331	0.62	-0.1
4,334,954	-		GFF4331	0.62	-1.9
4,335,008	+		GFF4331	0.65	-0.5
4,335,033	+		GFF4331	0.66	-0.4
4,335,033	+		GFF4331	0.66	-0.5
4,335,033	+		GFF4331	0.66	-1.2
4,335,033	+		GFF4331	0.66	+0.3
4,335,033	+		GFF4331	0.66	+0.0
4,335,041	-		GFF4331	0.66	+0.1
4,335,041	-		GFF4331	0.66	+0.1
4,335,041	-		GFF4331	0.66	+1.8
4,335,041	-		GFF4331	0.66	-1.2
4,335,041	-		GFF4331	0.66	-1.7
4,335,041	-		GFF4331	0.66	-0.7
4,335,041	-		GFF4331	0.66	+0.8
4,335,041	-		GFF4331	0.66	-0.6
4,335,041	-		GFF4331	0.66	-0.8
4,335,043	+		GFF4331	0.66	-1.1
4,335,052	+		GFF4331	0.67	-1.4
4,335,052	+		GFF4331	0.67	+0.7
4,335,057	+		GFF4331	0.67	+1.1
4,335,057	+		GFF4331	0.67	-1.3
4,335,060	-		GFF4331	0.67	-1.2
4,335,073	-		GFF4331	0.68	+0.2
4,335,091	+		GFF4331	0.68	+0.5
4,335,093	+		GFF4331	0.69	-0.8
4,335,124	-		GFF4331	0.70	+0.7
4,335,144	+		GFF4331	0.71	-0.2
4,335,144	+		GFF4331	0.71	+1.5
4,335,145	-		GFF4331	0.71	+1.1
4,335,173	-		GFF4331	0.72	+0.7
4,335,173	-		GFF4331	0.72	-0.1
4,335,202	+		GFF4331	0.74	-1.5
4,335,233	+		GFF4331	0.75	-0.5
4,335,239	-		GFF4331	0.75	+0.7
4,335,247	+		GFF4331	0.76	-0.1
4,335,255	-		GFF4331	0.76	-0.2
4,335,266	+		GFF4331	0.77	-1.4
4,335,266	+		GFF4331	0.77	+0.3
4,335,266	+		GFF4331	0.77	+0.7
4,335,266	+		GFF4331	0.77	-0.3
4,335,266	+		GFF4331	0.77	+0.1
4,335,266	+		GFF4331	0.77	+0.9
4,335,266	+		GFF4331	0.77	+1.8
4,335,266	+		GFF4331	0.77	+0.6
4,335,266	+		GFF4331	0.77	+0.3
4,335,272	+		GFF4331	0.77	-1.9
4,335,274	-		GFF4331	0.77	-1.7
4,335,274	-		GFF4331	0.77	+0.7
4,335,274	-		GFF4331	0.77	+0.2
4,335,274	-		GFF4331	0.77	-0.3
4,335,274	-		GFF4331	0.77	+1.4
4,335,274	-		GFF4331	0.77	+0.0
4,335,274	-		GFF4331	0.77	-0.6
4,335,274	-		GFF4331	0.77	+0.8
4,335,274	-		GFF4331	0.77	+1.5
4,335,274	-		GFF4331	0.77	-0.2
4,335,274	-		GFF4331	0.77	-0.1
4,335,280	-		GFF4331	0.77	+0.2
4,335,285	-		GFF4331	0.78	-1.2
4,335,285	-		GFF4331	0.78	+0.5
4,335,303	-		GFF4331	0.78	-1.0
4,335,303	-		GFF4331	0.78	-0.1
4,335,314	+		GFF4331	0.79	-0.1
4,335,316	+		GFF4331	0.79	-2.5
4,335,322	-		GFF4331	0.79	-0.4
4,335,347	+		GFF4331	0.81	+0.1
4,335,349	-		GFF4331	0.81	+1.3
4,335,352	+		GFF4331	0.81	-0.8
4,335,355	-		GFF4331	0.81	+0.7
4,335,355	-		GFF4331	0.81	-0.3
4,335,357	+		GFF4331	0.81	+0.7
4,335,362	+		GFF4331	0.81	-1.5
4,335,362	+		GFF4331	0.81	-0.1
4,335,365	-		GFF4331	0.81	-0.3
4,335,375	+		GFF4331	0.82	+0.0
4,335,396	+		GFF4331	0.83	-1.8
4,335,396	+		GFF4331	0.83	-2.0
4,335,404	-		GFF4331	0.83	-0.6
4,335,406	-		GFF4331	0.83	-0.4
4,335,427	+		GFF4331	0.84	+0.1
4,335,431	+		GFF4331	0.85	+0.3
4,335,432	+		GFF4331	0.85	-1.8
4,335,449	+		GFF4331	0.85	-0.3
4,335,457	-		GFF4331	0.86	-1.5
4,335,492	+		GFF4331	0.87	+0.2
4,335,510	-		GFF4331	0.88	+0.6
4,335,510	-		GFF4331	0.88	-0.1
4,335,535	-		GFF4331	0.89	-1.0
4,335,598	+				-1.6
4,335,608	+				-1.2
4,335,649	+				-0.2
4,335,651	-				-0.2
4,335,659	+				-0.2
4,335,680	-				-0.1
4,335,716	+				+1.1
4,335,716	+				+0.1
4,335,716	+				+0.4
4,335,716	+				+0.9
4,335,716	+				-1.6
4,335,716	+				+1.1
4,335,716	+				-0.4
4,335,716	+				-0.5
4,335,716	+				-1.7
4,335,721	+				-0.9
4,335,721	+				+0.3
4,335,724	+				+0.5
4,335,724	-				-0.1
4,335,724	-				-1.2
4,335,724	-				-1.8
4,335,724	-				-0.7
4,335,724	-				-0.1
4,335,724	-				+0.4
4,335,724	-				-0.6
4,335,724	-				-0.1
4,335,724	-				-0.2
4,335,728	-				+1.3
4,335,761	+				+0.7
4,335,775	-				+0.0
4,335,775	-				+0.9
4,335,802	-		GFF4332	0.11	-0.5
4,335,804	+		GFF4332	0.11	-0.5
4,335,804	+		GFF4332	0.11	-0.2
4,335,811	-		GFF4332	0.13	+1.2
4,335,842	+		GFF4332	0.20	+0.6
4,335,860	+		GFF4332	0.24	-0.5
4,335,861	-		GFF4332	0.24	+0.6
4,335,867	-		GFF4332	0.25	-0.2
4,335,867	-		GFF4332	0.25	+0.1
4,335,867	-		GFF4332	0.25	+0.7
4,335,867	-		GFF4332	0.25	-0.3
4,335,867	-		GFF4332	0.25	-1.7
4,335,869	+		GFF4332	0.26	-1.5
4,335,872	+		GFF4332	0.27	+0.8
4,335,880	+		GFF4332	0.28	-0.0
4,335,880	+		GFF4332	0.28	-1.4
4,335,891	+		GFF4332	0.31	+0.3
4,335,900	-		GFF4332	0.33	-0.8
4,335,918	+		GFF4332	0.37	+0.6
4,335,918	+		GFF4332	0.37	+0.8
4,335,923	+		GFF4332	0.38	+1.2
4,335,926	-		GFF4332	0.39	+0.5
4,335,931	-		GFF4332	0.40	+0.5
4,335,953	+		GFF4332	0.45	-0.6
4,335,953	+		GFF4332	0.45	-0.3
4,335,953	+		GFF4332	0.45	+0.8
4,335,953	+		GFF4332	0.45	-0.5
4,335,953	+		GFF4332	0.45	+0.6
4,335,953	+		GFF4332	0.45	-0.6
4,335,956	-		GFF4332	0.45	-0.9
4,335,961	-		GFF4332	0.47	+0.5
4,335,961	-		GFF4332	0.47	+0.5
4,335,971	-		GFF4332	0.49	+1.1
4,335,980	-		GFF4332	0.51	+0.3
4,335,987	-		GFF4332	0.52	-1.0
4,336,011	-		GFF4332	0.58	-0.8
4,336,015	-		GFF4332	0.59	-0.7
4,336,015	-		GFF4332	0.59	+0.2
4,336,033	-		GFF4332	0.63	-1.8
4,336,043	+		GFF4332	0.65	+0.4
4,336,087	-		GFF4332	0.75	+0.4
4,336,087	-		GFF4332	0.75	+0.2
4,336,087	-		GFF4332	0.75	-1.1
4,336,094	-		GFF4332	0.77	+0.2
4,336,101	-		GFF4332	0.78	+0.4
4,336,112	+		GFF4332	0.81	-0.5
4,336,114	-		GFF4332	0.81	-0.6
4,336,120	-		GFF4332	0.82	-0.5
4,336,138	-		GFF4332	0.86	-1.0
4,336,138	-		GFF4332	0.86	-1.5
4,336,152	-		GFF4332	0.90	-1.2
4,336,159	+				+0.5
4,336,204	+				+0.9
4,336,206	+				+1.7
4,336,206	+				-0.1
4,336,214	-				-2.5
4,336,221	-				+2.0
4,336,221	-				-0.0
4,336,223	-				+0.3
4,336,225	-				-0.4
4,336,244	+				-2.5
4,336,283	-				+0.5
4,336,287	+				+0.3
4,336,293	+				+1.1
4,336,295	-				-1.1
4,336,297	-				+0.3
4,336,301	-				-1.0
4,336,309	+				+0.4
4,336,309	+				-0.1
4,336,309	+				-1.6
4,336,309	+				-1.3
4,336,309	+				-1.9
4,336,309	+				+0.4
4,336,309	+				+0.6
4,336,309	+				-0.1
4,336,317	-				-0.6
4,336,317	-				-0.7
4,336,317	-				-2.0
4,336,317	-				-1.5
4,336,317	-				+0.5
4,336,324	+				+0.5
4,336,324	-				+1.6
4,336,334	+				+0.4
4,336,334	+				+1.2
4,336,334	+				-1.0
4,336,334	+				+0.1
4,336,334	+				-0.7
4,336,334	+				-0.5
4,336,337	-				-0.6
4,336,342	-				-1.2
4,336,342	-				+0.2
4,336,342	-				-0.1
4,336,342	-				-2.3
4,336,342	-				-2.1
4,336,342	-				+0.2
4,336,342	-				-1.2
4,336,342	-				-0.0
4,336,342	-				-1.8
4,336,353	+		GFF4333	0.10	-1.6
4,336,367	-		GFF4333	0.11	+0.5
4,336,369	+		GFF4333	0.11	-0.5
4,336,390	-		GFF4333	0.13	+1.4
4,336,390	-		GFF4333	0.13	-0.9
4,336,393	+		GFF4333	0.13	-1.6
4,336,393	+		GFF4333	0.13	+0.5
4,336,393	+		GFF4333	0.13	+0.4
4,336,393	+		GFF4333	0.13	+0.5
4,336,393	+		GFF4333	0.13	+0.1
4,336,393	+		GFF4333	0.13	-1.6
4,336,393	+		GFF4333	0.13	+0.7
4,336,393	+		GFF4333	0.13	-1.6
4,336,393	+		GFF4333	0.13	-1.5
4,336,393	+		GFF4333	0.13	+0.1
4,336,393	+		GFF4333	0.13	-2.6
4,336,393	+		GFF4333	0.13	+0.4
4,336,398	+		GFF4333	0.13	+0.6
4,336,401	-		GFF4333	0.13	-1.2
4,336,401	-		GFF4333	0.13	+0.0
4,336,401	-		GFF4333	0.13	+0.4
4,336,401	-		GFF4333	0.13	-0.5
4,336,401	-		GFF4333	0.13	+0.4
4,336,401	-		GFF4333	0.13	-0.0
4,336,401	-		GFF4333	0.13	+0.6
4,336,401	-		GFF4333	0.13	-2.2
4,336,401	-		GFF4333	0.13	-0.3
4,336,401	-		GFF4333	0.13	-0.2
4,336,401	-		GFF4333	0.13	+0.0
4,336,406	-		GFF4333	0.14	-2.1
4,336,451	+		GFF4333	0.17	-0.6
4,336,459	-		GFF4333	0.17	-0.4
4,336,459	-		GFF4333	0.17	+0.6
4,336,459	-		GFF4333	0.17	-0.5
4,336,466	+		GFF4333	0.18	-0.6
4,336,466	+		GFF4333	0.18	+0.7
4,336,466	+		GFF4333	0.18	+0.3
4,336,466	+		GFF4333	0.18	+1.0
4,336,466	+		GFF4333	0.18	-0.7
4,336,473	+		GFF4333	0.18	+0.9
4,336,474	+		GFF4333	0.18	+0.9
4,336,474	-		GFF4333	0.18	-1.6
4,336,474	-		GFF4333	0.18	-0.2
4,336,474	-		GFF4333	0.18	-0.5
4,336,481	-		GFF4333	0.19	-0.5
4,336,481	-		GFF4333	0.19	+0.1
4,336,481	-		GFF4333	0.19	-1.0
4,336,482	+		GFF4333	0.19	+0.6
4,336,495	-		GFF4333	0.20	+1.9
4,336,497	+		GFF4333	0.20	-1.6
4,336,500	-		GFF4333	0.20	-0.3
4,336,505	+		GFF4333	0.20	+0.0
4,336,510	+		GFF4333	0.20	+2.1
4,336,513	-		GFF4333	0.21	-0.8
4,336,513	-		GFF4333	0.21	+0.6
4,336,513	-		GFF4333	0.21	+0.2
4,336,513	-		GFF4333	0.21	-0.2
4,336,519	+		GFF4333	0.21	+0.7
4,336,519	+		GFF4333	0.21	+0.5
4,336,519	+		GFF4333	0.21	-1.1
4,336,519	+		GFF4333	0.21	-0.7
4,336,519	+		GFF4333	0.21	-0.3
4,336,527	-		GFF4333	0.22	+0.5
4,336,527	-		GFF4333	0.22	-0.7
4,336,527	-		GFF4333	0.22	-0.2
4,336,534	+		GFF4333	0.22	+0.5
4,336,537	-		GFF4333	0.22	+0.9
4,336,586	+		GFF4333	0.25	+0.1
4,336,597	+		GFF4333	0.26	-1.0
4,336,607	+		GFF4333	0.27	-1.5
4,336,609	+		GFF4333	0.27	-0.3
4,336,611	+		GFF4333	0.27	-0.3
4,336,615	-		GFF4333	0.27	+0.4
4,336,630	+		GFF4333	0.28	-0.3
4,336,638	-		GFF4333	0.29	-0.1
4,336,680	-		GFF4333	0.32	-2.5
4,336,682	+		GFF4333	0.32	-2.1
4,336,702	-		GFF4333	0.33	+0.8
4,336,710	-		GFF4333	0.33	-0.7
4,336,720	+		GFF4333	0.34	-2.1
4,336,743	+		GFF4333	0.36	-0.5
4,336,795	+		GFF4333	0.39	+0.7
4,336,796	-		GFF4333	0.39	+1.0
4,336,803	-		GFF4333	0.39	+0.1
4,336,814	-		GFF4333	0.40	-1.9
4,336,824	-		GFF4333	0.41	-0.8
4,336,826	+		GFF4333	0.41	-1.1
4,336,826	+		GFF4333	0.41	+0.6
4,336,826	+		GFF4333	0.41	-0.8
4,336,826	+		GFF4333	0.41	-0.2
4,336,826	+		GFF4333	0.41	-0.6
4,336,834	-		GFF4333	0.42	-1.3
4,336,836	-		GFF4333	0.42	-2.3
4,336,839	+		GFF4333	0.42	-0.3
4,336,839	-		GFF4333	0.42	+0.9
4,336,862	-		GFF4333	0.43	-0.1
4,336,883	+		GFF4333	0.45	-1.9
4,336,890	+		GFF4333	0.45	-1.3
4,336,898	+		GFF4333	0.46	+0.3
4,336,914	+		GFF4333	0.47	+1.2
4,336,916	-		GFF4333	0.47	-0.8
4,336,920	-		GFF4333	0.47	+0.5
4,336,920	-		GFF4333	0.47	-0.1
4,336,922	-		GFF4333	0.47	-0.6
4,336,922	-		GFF4333	0.47	+0.8
4,336,925	-		GFF4333	0.47	-0.7
4,336,933	-		GFF4333	0.48	-1.9
4,336,956	-		GFF4333	0.49	+0.2
4,336,956	-		GFF4333	0.49	+0.2
4,336,958	+		GFF4333	0.50	+0.4
4,336,958	-		GFF4333	0.50	-0.4
4,336,972	+		GFF4333	0.50	+0.0
4,336,987	+		GFF4333	0.51	-0.4
4,336,995	-		GFF4333	0.52	-0.0
4,336,995	-		GFF4333	0.52	+0.0
4,336,995	-		GFF4333	0.52	+0.1
4,337,030	+		GFF4333	0.54	+1.1
4,337,058	-		GFF4333	0.56	+0.9
4,337,058	-		GFF4333	0.56	-0.1
4,337,068	+		GFF4333	0.57	-0.1
4,337,076	-		GFF4333	0.57	-0.3
4,337,080	+		GFF4333	0.57	-1.0
4,337,080	+		GFF4333	0.57	+0.7
4,337,080	+		GFF4333	0.57	-0.5
4,337,088	-		GFF4333	0.58	-0.7
4,337,088	-		GFF4333	0.58	-0.0
4,337,088	-		GFF4333	0.58	-0.2
4,337,088	-		GFF4333	0.58	-0.4
4,337,119	-		GFF4333	0.60	-2.3
4,337,125	+		GFF4333	0.60	+0.1
4,337,126	-		GFF4333	0.60	-0.3
4,337,133	-		GFF4333	0.61	+0.5
4,337,133	-		GFF4333	0.61	+0.2
4,337,143	-		GFF4333	0.62	-0.6
4,337,151	+		GFF4333	0.62	-0.4
4,337,151	+		GFF4333	0.62	+1.2
4,337,161	+		GFF4333	0.63	+0.5
4,337,178	+		GFF4333	0.64	+0.1