Strain Fitness in Sphingobium sp. HT1-2 around GFF2870

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,926,463	-				-0.5
2,926,463	-				-0.8
2,926,463	-				-0.6
2,926,463	-				-1.1
2,926,463	-				-0.2
2,926,468	-				+0.8
2,926,468	-				-0.3
2,926,470	+				-0.3
2,926,478	-				-2.3
2,926,508	+				-0.2
2,926,513	+				-2.9
2,926,513	+				-0.2
2,926,516	-				-0.5
2,926,521	-				-0.6
2,926,535	-				+0.2
2,926,550	-				-0.2
2,926,555	-				+0.4
2,926,564	+				+1.4
2,926,577	-				-0.3
2,926,591	-		GFF2869	0.10	+0.3
2,926,615	+		GFF2869	0.13	-0.0
2,926,620	+		GFF2869	0.13	+0.0
2,926,620	+		GFF2869	0.13	-0.4
2,926,623	-		GFF2869	0.14	-2.4
2,926,625	+		GFF2869	0.14	+0.6
2,926,628	-		GFF2869	0.14	-0.1
2,926,630	-		GFF2869	0.14	-0.4
2,926,667	+		GFF2869	0.19	+0.5
2,926,667	+		GFF2869	0.19	-1.2
2,926,667	+		GFF2869	0.19	-0.2
2,926,688	-		GFF2869	0.21	-0.2
2,926,688	-		GFF2869	0.21	+0.8
2,926,697	-		GFF2869	0.22	-2.0
2,926,706	+		GFF2869	0.23	+0.8
2,926,707	-		GFF2869	0.23	+0.9
2,926,713	+		GFF2869	0.24	-0.8
2,926,727	+		GFF2869	0.25	+0.4
2,926,735	-		GFF2869	0.26	-2.4
2,926,735	-		GFF2869	0.26	+0.2
2,926,735	-		GFF2869	0.26	-1.4
2,926,739	+		GFF2869	0.27	+0.9
2,926,746	+		GFF2869	0.27	-0.5
2,926,771	+		GFF2869	0.30	-0.5
2,926,771	+		GFF2869	0.30	-1.1
2,926,784	+		GFF2869	0.32	+0.5
2,926,845	+		GFF2869	0.38	-1.2
2,926,845	+		GFF2869	0.38	+0.1
2,926,846	+		GFF2869	0.38	-0.6
2,926,853	+		GFF2869	0.39	-3.0
2,926,853	+		GFF2869	0.39	+0.8
2,926,877	+		GFF2869	0.42	-0.8
2,926,916	-		GFF2869	0.46	-0.1
2,926,916	-		GFF2869	0.46	+0.2
2,926,942	+		GFF2869	0.49	-0.3
2,926,942	+		GFF2869	0.49	+0.6
2,926,942	+		GFF2869	0.49	+0.3
2,926,942	+		GFF2869	0.49	-2.2
2,926,942	+		GFF2869	0.49	-0.7
2,926,942	+		GFF2869	0.49	-1.0
2,926,942	+		GFF2869	0.49	+0.2
2,926,942	+		GFF2869	0.49	-0.7
2,926,950	-		GFF2869	0.50	-0.8
2,926,950	-		GFF2869	0.50	-0.2
2,926,950	-		GFF2869	0.50	+0.2
2,926,950	-		GFF2869	0.50	-0.3
2,926,950	-		GFF2869	0.50	+0.6
2,926,950	-		GFF2869	0.50	-0.8
2,926,961	+		GFF2869	0.51	+1.1
2,926,966	+		GFF2869	0.52	-2.0
2,926,976	+		GFF2869	0.53	+0.1
2,926,976	+		GFF2869	0.53	+0.1
2,926,976	+		GFF2869	0.53	+0.1
2,926,976	+		GFF2869	0.53	-0.5
2,926,984	-		GFF2869	0.54	-0.1
2,926,984	-		GFF2869	0.54	-2.0
2,926,984	-		GFF2869	0.54	+1.1
2,926,984	-		GFF2869	0.54	+0.8
2,926,984	-		GFF2869	0.54	-1.0
2,926,996	+		GFF2869	0.55	-0.4
2,927,026	-		GFF2869	0.59	-0.9
2,927,104	+		GFF2869	0.67	-0.2
2,927,107	-		GFF2869	0.68	+0.0
2,927,107	-		GFF2869	0.68	+0.1
2,927,111	+		GFF2869	0.68	-0.0
2,927,174	-		GFF2869	0.75	-2.5
2,927,177	+		GFF2869	0.75	+0.4
2,927,177	+		GFF2869	0.75	-1.6
2,927,177	+		GFF2869	0.75	-0.4
2,927,177	+		GFF2869	0.75	-1.9
2,927,185	-		GFF2869	0.76	+0.1
2,927,185	-		GFF2869	0.76	-0.8
2,927,185	-		GFF2869	0.76	-1.1
2,927,193	+		GFF2869	0.77	+0.2
2,927,194	+		GFF2869	0.77	-0.0
2,927,201	-		GFF2869	0.78	-0.7
2,927,201	-		GFF2869	0.78	-0.8
2,927,201	-		GFF2869	0.78	-0.8
2,927,202	-		GFF2869	0.78	+0.2
2,927,211	+		GFF2869	0.79	+0.8
2,927,224	-		GFF2869	0.81	-2.4
2,927,224	-		GFF2869	0.81	-0.7
2,927,244	-		GFF2869	0.83	-0.4
2,927,250	+		GFF2869	0.84	-0.3
2,927,250	+		GFF2869	0.84	-0.5
2,927,250	+		GFF2869	0.84	+0.5
2,927,250	+		GFF2869	0.84	+0.3
2,927,250	+		GFF2869	0.84	-0.3
2,927,258	-		GFF2869	0.84	-0.4
2,927,258	-		GFF2869	0.84	-0.5
2,927,258	-		GFF2869	0.84	-0.0
2,927,258	-		GFF2869	0.84	-0.3
2,927,276	-		GFF2869	0.86	-0.6
2,927,301	+		GFF2869	0.89	+0.2
2,927,309	-				-1.7
2,927,327	+				+0.7
2,927,327	+				-2.7
2,927,327	+				+0.2
2,927,332	+				+0.4
2,927,335	-				-0.0
2,927,340	-				-0.9
2,927,350	+				-0.3
2,927,351	-				-0.8
2,927,358	-				+1.0
2,927,358	-				-1.0
2,927,358	-				+1.1
2,927,369	+				-0.7
2,927,372	-				-1.2
2,927,372	-				-0.2
2,927,372	-				-1.4
2,927,377	-				+0.3
2,927,410	+				-1.0
2,927,420	+				-1.0
2,927,452	+				+1.0
2,927,499	+				-1.7
2,927,507	-				-0.4
2,927,522	+				+1.3
2,927,551	+				-0.7
2,927,558	+				+0.2
2,927,595	+		GFF2870	0.12	+0.4
2,927,610	+		GFF2870	0.13	-0.4
2,927,645	+		GFF2870	0.16	-0.2
2,927,645	+		GFF2870	0.16	-0.3
2,927,645	+		GFF2870	0.16	-0.1
2,927,645	+		GFF2870	0.16	-0.9
2,927,653	-		GFF2870	0.17	+0.7
2,927,653	-		GFF2870	0.17	-0.0
2,927,654	-		GFF2870	0.17	-1.4
2,927,654	-		GFF2870	0.17	-0.8
2,927,654	-		GFF2870	0.17	-2.0
2,927,702	+		GFF2870	0.21	-0.6
2,927,726	+		GFF2870	0.23	-1.5
2,927,786	+		GFF2870	0.28	-1.3
2,927,786	+		GFF2870	0.28	-0.7
2,927,809	-		GFF2870	0.30	+0.1
2,927,814	-		GFF2870	0.31	+0.0
2,927,816	+		GFF2870	0.31	-0.2
2,927,833	+		GFF2870	0.32	-0.1
2,927,841	-		GFF2870	0.33	-0.0
2,927,846	-		GFF2870	0.33	-0.5
2,927,852	-		GFF2870	0.34	-0.2
2,927,874	+		GFF2870	0.36	-1.3
2,927,876	-		GFF2870	0.36	-1.6
2,927,882	-		GFF2870	0.36	+0.7
2,927,894	+		GFF2870	0.38	-0.6
2,927,894	+		GFF2870	0.38	+0.3
2,927,894	+		GFF2870	0.38	-0.3
2,927,894	+		GFF2870	0.38	+0.1
2,927,894	+		GFF2870	0.38	+0.9
2,927,894	+		GFF2870	0.38	-0.3
2,927,894	+		GFF2870	0.38	+0.5
2,927,894	+		GFF2870	0.38	-1.2
2,927,894	+		GFF2870	0.38	+0.6
2,927,894	+		GFF2870	0.38	+1.2
2,927,894	+		GFF2870	0.38	-0.9
2,927,894	+		GFF2870	0.38	+1.4
2,927,894	+		GFF2870	0.38	-0.2
2,927,894	+		GFF2870	0.38	-0.0
2,927,901	-		GFF2870	0.38	-0.3
2,927,902	-		GFF2870	0.38	+0.9
2,927,902	-		GFF2870	0.38	-1.1
2,927,902	-		GFF2870	0.38	-0.8
2,927,902	-		GFF2870	0.38	+1.1
2,927,902	-		GFF2870	0.38	+0.5
2,927,902	-		GFF2870	0.38	-0.4
2,927,902	-		GFF2870	0.38	-0.4
2,927,902	-		GFF2870	0.38	+1.4
2,927,903	-		GFF2870	0.38	-0.2
2,927,909	-		GFF2870	0.39	+0.1
2,927,910	+		GFF2870	0.39	-1.2
2,927,918	-		GFF2870	0.40	-0.2
2,927,930	-		GFF2870	0.41	+0.7
2,927,939	+		GFF2870	0.41	+0.7
2,927,947	-		GFF2870	0.42	-2.5
2,927,958	+		GFF2870	0.43	+0.3
2,927,963	+		GFF2870	0.43	-1.0
2,927,963	+		GFF2870	0.43	-0.4
2,927,971	-		GFF2870	0.44	-0.2
2,927,992	+		GFF2870	0.46	-0.8
2,928,052	-		GFF2870	0.51	+0.4
2,928,078	+		GFF2870	0.53	-1.1
2,928,087	+		GFF2870	0.54	-1.3
2,928,090	-		GFF2870	0.55	-0.8
2,928,107	-		GFF2870	0.56	-0.6
2,928,113	+		GFF2870	0.57	-0.5
2,928,121	+		GFF2870	0.57	+1.6
2,928,122	+		GFF2870	0.57	+0.4
2,928,122	+		GFF2870	0.57	+0.0
2,928,122	-		GFF2870	0.57	-0.7
2,928,166	+		GFF2870	0.61	-2.0
2,928,168	+		GFF2870	0.61	-0.7
2,928,175	-		GFF2870	0.62	-0.8
2,928,177	+		GFF2870	0.62	-0.4
2,928,178	+		GFF2870	0.62	+0.2
2,928,178	+		GFF2870	0.62	+0.2
2,928,183	+		GFF2870	0.63	+0.6
2,928,183	+		GFF2870	0.63	-0.6
2,928,186	-		GFF2870	0.63	-0.7
2,928,186	-		GFF2870	0.63	-0.8
2,928,188	+		GFF2870	0.63	-0.0
2,928,188	+		GFF2870	0.63	+0.4
2,928,188	+		GFF2870	0.63	+0.5
2,928,188	+		GFF2870	0.63	-2.6
2,928,193	+		GFF2870	0.63	-1.2
2,928,196	-		GFF2870	0.64	+0.0
2,928,196	-		GFF2870	0.64	-0.5
2,928,196	-		GFF2870	0.64	-1.2
2,928,196	-		GFF2870	0.64	-0.1
2,928,196	-		GFF2870	0.64	+0.1
2,928,196	-		GFF2870	0.64	-1.0
2,928,201	-		GFF2870	0.64	+0.3
2,928,201	-		GFF2870	0.64	+0.4
2,928,201	-		GFF2870	0.64	+1.1
2,928,201	-		GFF2870	0.64	+0.9
2,928,201	-		GFF2870	0.64	+0.2
2,928,223	+		GFF2870	0.66	-0.9
2,928,225	-		GFF2870	0.66	+1.1
2,928,231	-		GFF2870	0.67	-1.5
2,928,233	-		GFF2870	0.67	-2.6
2,928,272	+		GFF2870	0.70	+1.0
2,928,272	+		GFF2870	0.70	-0.4
2,928,281	-		GFF2870	0.71	-0.2
2,928,281	-		GFF2870	0.71	+0.2
2,928,306	+		GFF2870	0.73	-1.4
2,928,330	-		GFF2870	0.75	-0.7
2,928,338	+		GFF2870	0.76	+0.3
2,928,347	-		GFF2870	0.77	+0.9
2,928,354	+		GFF2870	0.77	-0.5
2,928,354	+		GFF2870	0.77	-0.5
2,928,354	+		GFF2870	0.77	+0.5
2,928,357	+		GFF2870	0.78	-2.0
2,928,385	+		GFF2870	0.80	+0.1
2,928,395	+		GFF2870	0.81	+0.9
2,928,395	+		GFF2870	0.81	-0.0
2,928,395	+		GFF2870	0.81	-1.8
2,928,402	+		GFF2870	0.82	+0.7
2,928,415	-		GFF2870	0.83	+0.5
2,928,446	-		GFF2870	0.85	+0.2
2,928,464	-		GFF2870	0.87	+0.9
2,928,475	-		GFF2870	0.88	+0.8
2,928,477	+		GFF2870	0.88	+0.6
2,928,485	-		GFF2870	0.89	-1.6
2,928,493	+		GFF2870	0.89	-1.5
2,928,520	+				-1.8
2,928,520	+				-1.9
2,928,522	-				-0.7
2,928,522	-				+1.3
2,928,522	-				-1.1
2,928,535	+				+0.5
2,928,541	+				+1.8
2,928,543	-				-0.2
2,928,543	-				-1.2
2,928,549	+				-2.0
2,928,549	-				+0.9
2,928,551	+				+1.1
2,928,564	-				-0.8
2,928,596	+				-0.3
2,928,601	+				-0.2
2,928,650	+				-0.2
2,928,655	+				+0.2
2,928,655	+				+1.3
2,928,655	+				+0.8
2,928,663	-				-1.3
2,928,672	+				+0.7
2,928,672	+				-0.0
2,928,678	+				-1.2
2,928,678	+				-0.0
2,928,678	+				-0.8
2,928,680	-				-0.2
2,928,686	-				-0.7
2,928,686	-				-0.6
2,928,687	+				-0.4
2,928,687	+				-0.3
2,928,688	-				+0.4
2,928,695	-				-0.8
2,928,695	-				+0.4
2,928,700	-				+0.3
2,928,712	+				-1.0
2,928,720	+				-0.4
2,928,720	+				-2.6
2,928,720	-				-0.5
2,928,720	-				+0.1
2,928,720	-				-2.0
2,928,720	-				+0.2
2,928,720	-				-2.0
2,928,720	-				-0.3
2,928,720	-				+0.3
2,928,778	+				-0.4
2,928,789	+		GFF2871	0.11	+0.2
2,928,803	+		GFF2871	0.13	-0.9
2,928,808	+		GFF2871	0.13	-1.0
2,928,808	+		GFF2871	0.13	-0.6
2,928,811	-		GFF2871	0.14	+1.3
2,928,816	-		GFF2871	0.15	-1.6
2,928,816	-		GFF2871	0.15	+1.1
2,928,823	+		GFF2871	0.16	-0.9
2,928,823	+		GFF2871	0.16	+0.3
2,928,823	+		GFF2871	0.16	-1.2
2,928,831	-		GFF2871	0.17	+0.9
2,928,831	-		GFF2871	0.17	+2.4
2,928,831	-		GFF2871	0.17	+0.6
2,928,854	+		GFF2871	0.20	-0.4
2,928,854	+		GFF2871	0.20	-2.0
2,928,906	-		GFF2871	0.28	-0.4
2,928,909	+		GFF2871	0.28	-1.4
2,928,917	-		GFF2871	0.29	-0.2
2,928,928	-		GFF2871	0.31	-1.3
2,928,939	+		GFF2871	0.33	-0.4
2,928,939	+		GFF2871	0.33	-0.2
2,928,939	+		GFF2871	0.33	-0.7
2,928,939	+		GFF2871	0.33	+0.2
2,928,939	+		GFF2871	0.33	-1.8
2,928,939	+		GFF2871	0.33	+0.3
2,928,947	-		GFF2871	0.34	+1.3
2,928,947	-		GFF2871	0.34	-1.3
2,928,947	-		GFF2871	0.34	+0.0
2,928,947	-		GFF2871	0.34	-1.0
2,928,947	-		GFF2871	0.34	+1.6
2,928,947	-		GFF2871	0.34	-2.0
2,928,971	+		GFF2871	0.37	+0.9
2,928,975	-		GFF2871	0.38	-0.5
2,928,980	-		GFF2871	0.39	-1.4
2,928,980	-		GFF2871	0.39	+0.6
2,928,980	-		GFF2871	0.39	-0.4
2,928,986	-		GFF2871	0.40	-0.5
2,928,986	-		GFF2871	0.40	-2.0
2,929,008	+		GFF2871	0.43	+0.4
2,929,008	+		GFF2871	0.43	-0.4
2,929,016	+		GFF2871	0.44	+0.9
2,929,016	+		GFF2871	0.44	+0.9
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2,929,060	+		GFF2871	0.51	-0.8
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2,929,079	+		GFF2871	0.53	-1.9
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2,929,335	-				-0.8
2,929,341	+				-0.8
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2,929,394	+				-0.9
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2,929,402	-				+0.2
2,929,409	+				-0.3
2,929,419	-				-2.4
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2,929,454	-				+0.4
2,929,473	-				+1.2
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