Strain Fitness in Sphingobium sp. HT1-2 around GFF2796

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,830,249	-		GFF2795	0.49	+0.1
2,830,249	-		GFF2795	0.49	-0.8
2,830,249	-		GFF2795	0.49	-0.2
2,830,249	-		GFF2795	0.49	-0.2
2,830,264	-		GFF2795	0.50	-0.0
2,830,284	-		GFF2795	0.51	+0.4
2,830,302	+		GFF2795	0.52	-0.5
2,830,305	-		GFF2795	0.52	-0.5
2,830,305	-		GFF2795	0.52	-0.3
2,830,350	+		GFF2795	0.55	-2.1
2,830,375	-		GFF2795	0.57	-0.6
2,830,384	+		GFF2795	0.58	-0.4
2,830,394	-		GFF2795	0.58	-1.1
2,830,414	+		GFF2795	0.60	-1.0
2,830,426	+		GFF2795	0.60	-1.2
2,830,428	-		GFF2795	0.60	-1.4
2,830,431	+		GFF2795	0.61	-0.2
2,830,438	-		GFF2795	0.61	-1.0
2,830,462	+		GFF2795	0.63	-1.2
2,830,462	+		GFF2795	0.63	-0.3
2,830,470	-		GFF2795	0.63	+0.1
2,830,506	+		GFF2795	0.66	+0.4
2,830,533	+		GFF2795	0.67	+0.4
2,830,540	+		GFF2795	0.68	+0.7
2,830,548	-		GFF2795	0.68	-0.1
2,830,548	-		GFF2795	0.68	+0.9
2,830,548	-		GFF2795	0.68	-0.3
2,830,593	-		GFF2795	0.71	-2.6
2,830,685	+		GFF2795	0.77	+0.2
2,830,685	-		GFF2795	0.77	+1.4
2,830,702	+		GFF2795	0.78	-1.5
2,830,739	+		GFF2795	0.81	-0.6
2,830,739	+		GFF2795	0.81	-1.3
2,830,744	+		GFF2795	0.81	+0.6
2,830,744	+		GFF2795	0.81	+0.2
2,830,747	-		GFF2795	0.81	-0.2
2,830,747	-		GFF2795	0.81	+1.2
2,830,747	-		GFF2795	0.81	-0.7
2,830,747	-		GFF2795	0.81	-0.0
2,830,747	-		GFF2795	0.81	-0.5
2,830,747	-		GFF2795	0.81	+0.6
2,830,747	-		GFF2795	0.81	+0.3
2,830,747	-		GFF2795	0.81	-0.4
2,830,747	-		GFF2795	0.81	+0.1
2,830,747	-		GFF2795	0.81	+0.3
2,830,752	-		GFF2795	0.82	-0.3
2,830,768	+		GFF2795	0.83	-0.9
2,830,778	+		GFF2795	0.83	-0.9
2,830,780	+		GFF2795	0.84	-2.5
2,830,780	+		GFF2795	0.84	-1.7
2,830,780	+		GFF2795	0.84	+1.2
2,830,780	+		GFF2795	0.84	+0.3
2,830,780	+		GFF2795	0.84	-0.4
2,830,788	-		GFF2795	0.84	-0.7
2,830,788	-		GFF2795	0.84	+0.4
2,830,788	-		GFF2795	0.84	+0.6
2,830,788	-		GFF2795	0.84	-0.5
2,830,788	-		GFF2795	0.84	+0.8
2,830,804	+		GFF2795	0.85	-0.8
2,830,812	-		GFF2795	0.86	+0.2
2,830,818	+		GFF2795	0.86	-2.4
2,830,818	-		GFF2795	0.86	+0.0
2,830,828	-		GFF2795	0.87	-1.0
2,830,849	+		GFF2795	0.88	-1.4
2,830,859	+		GFF2795	0.89	-0.9
2,830,862	+		GFF2795	0.89	+1.0
2,830,865	-		GFF2795	0.89	+1.4
2,830,870	-		GFF2795	0.89	+0.8
2,830,879	+				-0.3
2,830,884	+				-1.4
2,830,892	-				+1.1
2,830,940	+				-0.4
2,830,940	+				+0.7
2,830,943	-				+1.5
2,830,943	-				+0.2
2,830,950	-				-0.2
2,830,996	-				-0.9
2,830,997	-				+0.5
2,831,002	+				-0.3
2,831,010	-				+1.1
2,831,059	+				+0.8
2,831,066	+				-0.2
2,831,066	+				+0.8
2,831,067	-				-1.6
2,831,067	-				+0.1
2,831,067	-				-0.4
2,831,068	-				-1.1
2,831,074	-				-0.6
2,831,076	-				-0.4
2,831,100	+				+0.8
2,831,117	+				-1.2
2,831,158	-				+0.9
2,831,168	-				+0.6
2,831,180	-				+0.3
2,831,187	+				+0.7
2,831,192	+				-0.6
2,831,195	+				-0.1
2,831,195	+				-0.7
2,831,207	+				+1.4
2,831,207	+				+0.8
2,831,207	+				-0.9
2,831,210	+				+1.6
2,831,215	+				-0.8
2,831,215	-				-0.2
2,831,215	-				-0.7
2,831,215	-				-0.4
2,831,215	-				-0.4
2,831,215	-				-1.3
2,831,217	+				+0.1
2,831,217	+				+1.1
2,831,218	-				-0.3
2,831,227	+				-1.2
2,831,227	+				+2.2
2,831,231	+				+0.1
2,831,235	-				+0.5
2,831,235	-				-0.2
2,831,246	+				-1.0
2,831,247	+				-0.3
2,831,247	-				+0.2
2,831,275	+				-0.1
2,831,278	+				-0.9
2,831,313	+				-2.1
2,831,339	-				+0.5
2,831,359	+				-2.1
2,831,366	+				+0.0
2,831,367	-				-0.4
2,831,367	-				-0.2
2,831,372	+				+0.7
2,831,372	+				-1.0
2,831,372	+				-1.5
2,831,374	-		GFF2796	0.10	-0.1
2,831,387	-		GFF2796	0.11	-0.1
2,831,400	+		GFF2796	0.12	-0.9
2,831,402	-		GFF2796	0.12	-0.3
2,831,402	-		GFF2796	0.12	-0.3
2,831,514	+		GFF2796	0.20	-0.5
2,831,521	-		GFF2796	0.21	-0.4
2,831,537	+		GFF2796	0.22	+1.1
2,831,537	+		GFF2796	0.22	-0.2
2,831,542	+		GFF2796	0.23	-0.0
2,831,545	-		GFF2796	0.23	+0.2
2,831,547	-		GFF2796	0.23	-2.2
2,831,548	+		GFF2796	0.23	-0.4
2,831,548	+		GFF2796	0.23	-2.4
2,831,550	-		GFF2796	0.23	-1.3
2,831,550	-		GFF2796	0.23	+1.3
2,831,561	-		GFF2796	0.24	-0.5
2,831,571	+		GFF2796	0.25	+0.9
2,831,571	+		GFF2796	0.25	-0.4
2,831,579	-		GFF2796	0.25	-0.0
2,831,597	+		GFF2796	0.27	+0.2
2,831,613	-		GFF2796	0.28	+1.3
2,831,630	-		GFF2796	0.29	-2.2
2,831,646	-		GFF2796	0.30	+0.2
2,831,667	+		GFF2796	0.32	-1.6
2,831,677	+		GFF2796	0.33	-0.8
2,831,678	+		GFF2796	0.33	-1.9
2,831,686	-		GFF2796	0.33	-1.6
2,831,696	+		GFF2796	0.34	+0.5
2,831,733	+		GFF2796	0.37	+0.6
2,831,733	+		GFF2796	0.37	+0.3
2,831,741	-		GFF2796	0.37	+0.4
2,831,741	-		GFF2796	0.37	-1.6
2,831,743	+		GFF2796	0.37	-0.0
2,831,743	+		GFF2796	0.37	-1.2
2,831,757	-		GFF2796	0.38	-1.6
2,831,774	-		GFF2796	0.40	-1.3
2,831,775	+		GFF2796	0.40	-0.5
2,831,783	-		GFF2796	0.40	-0.7
2,831,798	+		GFF2796	0.41	-0.5
2,831,798	+		GFF2796	0.41	-2.0
2,831,798	-		GFF2796	0.41	-0.6
2,831,798	-		GFF2796	0.41	-0.6
2,831,798	-		GFF2796	0.41	-0.9
2,831,808	-		GFF2796	0.42	-1.6
2,831,813	+		GFF2796	0.43	-0.2
2,831,813	+		GFF2796	0.43	+1.3
2,831,813	+		GFF2796	0.43	-2.2
2,831,813	+		GFF2796	0.43	+2.1
2,831,813	+		GFF2796	0.43	-1.4
2,831,813	+		GFF2796	0.43	-0.5
2,831,821	-		GFF2796	0.43	+2.4
2,831,821	-		GFF2796	0.43	-0.4
2,831,821	-		GFF2796	0.43	-0.8
2,831,835	-		GFF2796	0.44	+0.5
2,831,840	+		GFF2796	0.45	+0.4
2,831,848	-		GFF2796	0.45	+0.1
2,831,848	-		GFF2796	0.45	+0.0
2,831,848	-		GFF2796	0.45	-1.0
2,831,863	-		GFF2796	0.46	+0.8
2,831,873	-		GFF2796	0.47	-1.5
2,831,881	+		GFF2796	0.48	+0.8
2,831,892	+		GFF2796	0.48	-0.0
2,831,900	-		GFF2796	0.49	+0.2
2,831,900	-		GFF2796	0.49	+0.3
2,831,900	-		GFF2796	0.49	+0.5
2,831,905	-		GFF2796	0.49	-0.8
2,831,905	-		GFF2796	0.49	-0.0
2,831,907	+		GFF2796	0.50	-0.1
2,831,907	+		GFF2796	0.50	-0.8
2,831,907	+		GFF2796	0.50	-1.9
2,831,907	+		GFF2796	0.50	-0.4
2,831,907	+		GFF2796	0.50	-1.3
2,831,907	+		GFF2796	0.50	-1.6
2,831,907	+		GFF2796	0.50	+0.2
2,831,907	+		GFF2796	0.50	+0.5
2,831,907	+		GFF2796	0.50	-0.8
2,831,909	-		GFF2796	0.50	+0.2
2,831,915	-		GFF2796	0.50	-0.6
2,831,918	+		GFF2796	0.50	+0.2
2,831,925	-		GFF2796	0.51	-0.3
2,831,926	+		GFF2796	0.51	-2.2
2,831,926	-		GFF2796	0.51	-0.1
2,831,926	-		GFF2796	0.51	-3.0
2,831,926	-		GFF2796	0.51	-1.2
2,831,926	-		GFF2796	0.51	-0.8
2,831,928	+		GFF2796	0.51	-0.8
2,831,928	+		GFF2796	0.51	-1.8
2,831,928	+		GFF2796	0.51	-0.7
2,831,928	+		GFF2796	0.51	-0.4
2,831,928	+		GFF2796	0.51	+0.8
2,831,928	+		GFF2796	0.51	-1.4
2,831,928	+		GFF2796	0.51	-0.4
2,831,931	-		GFF2796	0.51	-0.8
2,831,936	-		GFF2796	0.52	-1.4
2,831,936	-		GFF2796	0.52	-0.3
2,831,936	-		GFF2796	0.52	+0.2
2,831,936	-		GFF2796	0.52	-0.5
2,831,936	-		GFF2796	0.52	-0.5
2,831,936	-		GFF2796	0.52	+0.3
2,831,936	-		GFF2796	0.52	-0.3
2,831,936	-		GFF2796	0.52	-0.4
2,831,936	-		GFF2796	0.52	+0.6
2,831,936	-		GFF2796	0.52	-2.2
2,831,966	+		GFF2796	0.54	+1.3
2,831,966	+		GFF2796	0.54	+0.8
2,831,966	+		GFF2796	0.54	-1.9
2,831,969	-		GFF2796	0.54	-1.6
2,831,969	-		GFF2796	0.54	+0.7
2,831,971	+		GFF2796	0.54	+0.4
2,831,971	+		GFF2796	0.54	-0.5
2,831,974	-		GFF2796	0.54	+0.8
2,831,974	-		GFF2796	0.54	-2.2
2,831,974	-		GFF2796	0.54	-2.0
2,831,979	-		GFF2796	0.55	+1.3
2,831,979	-		GFF2796	0.55	+0.5
2,831,979	-		GFF2796	0.55	-0.3
2,831,987	-		GFF2796	0.55	+0.4
2,832,020	+		GFF2796	0.58	-0.0
2,832,042	-		GFF2796	0.59	-0.0
2,832,044	-		GFF2796	0.60	+0.2
2,832,046	+		GFF2796	0.60	+0.4
2,832,055	-		GFF2796	0.60	+0.3
2,832,103	+		GFF2796	0.64	+0.8
2,832,103	+		GFF2796	0.64	-1.1
2,832,106	+		GFF2796	0.64	+0.2
2,832,108	+		GFF2796	0.64	-1.0
2,832,114	-		GFF2796	0.65	+0.6
2,832,114	-		GFF2796	0.65	-0.6
2,832,116	-		GFF2796	0.65	+0.0
2,832,146	+		GFF2796	0.67	+0.4
2,832,164	+		GFF2796	0.69	-0.2
2,832,164	+		GFF2796	0.69	+0.3
2,832,167	-		GFF2796	0.69	+1.4
2,832,172	-		GFF2796	0.69	-0.3
2,832,187	+		GFF2796	0.70	+0.6
2,832,197	+		GFF2796	0.71	-1.5
2,832,197	+		GFF2796	0.71	-0.8
2,832,210	-		GFF2796	0.72	-0.8
2,832,210	-		GFF2796	0.72	+1.4
2,832,239	+		GFF2796	0.74	-0.1
2,832,247	-		GFF2796	0.75	-0.3
2,832,268	+		GFF2796	0.76	-0.6
2,832,269	+		GFF2796	0.76	-0.1
2,832,269	-		GFF2796	0.76	-0.1
2,832,276	-		GFF2796	0.77	-1.8
2,832,277	-		GFF2796	0.77	-0.2
2,832,285	-		GFF2796	0.77	+1.6
2,832,292	+		GFF2796	0.78	-0.4
2,832,298	+		GFF2796	0.78	+1.2
2,832,303	+		GFF2796	0.79	+1.1
2,832,303	+		GFF2796	0.79	-1.2
2,832,303	+		GFF2796	0.79	-1.2
2,832,306	-		GFF2796	0.79	-1.0
2,832,311	-		GFF2796	0.79	-0.5
2,832,311	-		GFF2796	0.79	+0.7
2,832,331	+		GFF2796	0.81	-0.8
2,832,331	+		GFF2796	0.81	-2.2
2,832,339	-		GFF2796	0.81	+0.5
2,832,344	+		GFF2796	0.82	+0.5
2,832,374	+		GFF2796	0.84	+0.7
2,832,399	-		GFF2796	0.86	-1.6
2,832,419	+		GFF2796	0.87	+0.1
2,832,419	+		GFF2796	0.87	+0.2
2,832,423	+		GFF2796	0.88	-0.9
2,832,426	-		GFF2796	0.88	+0.1
2,832,426	-		GFF2796	0.88	-3.0
2,832,436	+		GFF2796	0.89	+0.7
2,832,469	-				-0.4
2,832,491	+				+0.4
2,832,499	+				+0.7
2,832,501	+				-1.0
2,832,530	+				-0.2
2,832,567	+				+0.2
2,832,567	+				-0.1
2,832,670	+				+1.1
2,832,699	+				-1.3
2,832,700	+				-1.3
2,832,707	-				-0.4
2,832,707	-				-0.2
2,832,718	+				+1.4
2,832,722	+				-0.2
2,832,752	+				-1.8
2,832,752	+				+0.4
2,832,752	+				-0.5
2,832,752	+				+0.3
2,832,783	+				-1.1
2,832,790	+				-0.4
2,832,790	+				+1.4
2,832,790	+				+0.1
2,832,790	+				-1.4
2,832,790	+				+0.8
2,832,790	+				+0.1
2,832,790	+				+0.5
2,832,791	+				-0.8
2,832,791	+				-1.4
2,832,791	+				-1.1
2,832,791	+				-1.6
2,832,791	+				-0.3
2,832,791	+				+0.4
2,832,791	+				-1.2
2,832,798	-				-1.2
2,832,798	-				-1.5
2,832,798	-				-1.9
2,832,798	-				-0.2
2,832,799	-				+0.9
2,832,799	-				+0.5
2,832,799	-				-0.3
2,832,799	-				+0.4
2,832,799	-				+0.9
2,832,799	-				+0.2
2,832,799	-				-0.5
2,832,799	-				+0.2
2,832,815	+				-0.4
2,832,847	+		GFF2797	0.12	+0.5
2,832,853	-		GFF2797	0.12	-0.5
2,832,855	-		GFF2797	0.12	+0.5
2,832,864	+		GFF2797	0.13	+0.0
2,832,872	-		GFF2797	0.14	-0.4
2,832,872	-		GFF2797	0.14	-2.2
2,832,872	-		GFF2797	0.14	+0.2
2,832,874	+		GFF2797	0.14	-1.8
2,832,874	+		GFF2797	0.14	-2.2
2,832,874	+		GFF2797	0.14	-0.4
2,832,882	-		GFF2797	0.14	-0.6
2,832,883	-		GFF2797	0.15	-0.6
2,832,889	+		GFF2797	0.15	-2.4
2,832,900	+		GFF2797	0.16	-0.4
2,832,933	+		GFF2797	0.18	-1.2
2,832,933	+		GFF2797	0.18	-0.0
2,832,933	+		GFF2797	0.18	-0.0
2,832,940	-		GFF2797	0.19	-0.9
2,832,941	-		GFF2797	0.19	+0.2
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