Strain Fitness in Sphingobium sp. HT1-2 around GFF2762

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,792,867	-				-1.1
2,792,877	+				-0.0
2,792,885	+				-1.2
2,792,885	+				-0.1
2,792,885	-				-0.8
2,792,886	+				-0.0
2,792,886	+				-1.4
2,792,886	+				+0.5
2,792,886	-				+0.4
2,792,891	+				-1.4
2,792,918	+		GFF2761	0.13	-1.1
2,792,920	+		GFF2761	0.13	-1.2
2,792,979	-		GFF2761	0.19	+0.2
2,792,986	-		GFF2761	0.20	+1.7
2,792,990	-		GFF2761	0.21	-1.9
2,792,997	-		GFF2761	0.21	-0.2
2,793,002	+		GFF2761	0.22	-0.6
2,793,018	+		GFF2761	0.24	-0.4
2,793,018	+		GFF2761	0.24	+2.2
2,793,025	+		GFF2761	0.25	-0.7
2,793,025	+		GFF2761	0.25	-0.8
2,793,026	-		GFF2761	0.25	-2.1
2,793,033	-		GFF2761	0.25	-1.6
2,793,033	-		GFF2761	0.25	-1.5
2,793,033	-		GFF2761	0.25	+1.3
2,793,042	-		GFF2761	0.26	-0.4
2,793,047	-		GFF2761	0.27	+1.2
2,793,067	-		GFF2761	0.29	-1.6
2,793,068	-		GFF2761	0.29	-1.6
2,793,068	-		GFF2761	0.29	+1.0
2,793,068	-		GFF2761	0.29	-1.8
2,793,068	-		GFF2761	0.29	-0.2
2,793,072	+		GFF2761	0.30	-0.3
2,793,072	+		GFF2761	0.30	-0.8
2,793,072	+		GFF2761	0.30	-1.5
2,793,072	+		GFF2761	0.30	+0.6
2,793,072	+		GFF2761	0.30	-0.4
2,793,072	+		GFF2761	0.30	-1.0
2,793,080	-		GFF2761	0.31	-0.5
2,793,080	-		GFF2761	0.31	-0.3
2,793,080	-		GFF2761	0.31	-0.1
2,793,099	+		GFF2761	0.33	-0.3
2,793,131	-		GFF2761	0.36	-2.0
2,793,131	-		GFF2761	0.36	-0.4
2,793,146	+		GFF2761	0.38	+0.3
2,793,158	-		GFF2761	0.39	-0.4
2,793,164	+		GFF2761	0.40	-1.8
2,793,238	-		GFF2761	0.48	-1.4
2,793,248	-		GFF2761	0.49	+1.8
2,793,254	-		GFF2761	0.50	-0.6
2,793,263	+		GFF2761	0.51	-0.3
2,793,268	+		GFF2761	0.51	+0.9
2,793,268	+		GFF2761	0.51	-0.1
2,793,268	+		GFF2761	0.51	-0.1
2,793,271	-		GFF2761	0.52	-1.2
2,793,273	+		GFF2761	0.52	-0.3
2,793,276	-		GFF2761	0.52	-0.1
2,793,276	-		GFF2761	0.52	-0.6
2,793,277	+		GFF2761	0.52	+0.2
2,793,282	+		GFF2761	0.53	+0.8
2,793,290	-		GFF2761	0.54	-0.3
2,793,300	+		GFF2761	0.55	-1.0
2,793,300	+		GFF2761	0.55	-0.1
2,793,300	+		GFF2761	0.55	+0.4
2,793,300	+		GFF2761	0.55	+0.5
2,793,300	+		GFF2761	0.55	+1.9
2,793,300	+		GFF2761	0.55	-0.2
2,793,303	-		GFF2761	0.55	-0.4
2,793,305	+		GFF2761	0.55	+1.7
2,793,308	-		GFF2761	0.56	-0.9
2,793,308	-		GFF2761	0.56	-0.4
2,793,308	-		GFF2761	0.56	+0.8
2,793,308	-		GFF2761	0.56	+0.4
2,793,308	-		GFF2761	0.56	-2.3
2,793,308	-		GFF2761	0.56	+0.1
2,793,311	+		GFF2761	0.56	-1.8
2,793,312	+		GFF2761	0.56	-2.2
2,793,317	+		GFF2761	0.57	-1.7
2,793,318	-		GFF2761	0.57	+0.7
2,793,318	-		GFF2761	0.57	+0.0
2,793,320	-		GFF2761	0.57	-0.1
2,793,338	-		GFF2761	0.59	-0.9
2,793,368	+		GFF2761	0.62	-0.8
2,793,375	+		GFF2761	0.63	+0.6
2,793,376	+		GFF2761	0.63	+0.3
2,793,376	+		GFF2761	0.63	+1.6
2,793,376	+		GFF2761	0.63	-1.8
2,793,383	-		GFF2761	0.64	-0.4
2,793,383	-		GFF2761	0.64	-0.0
2,793,384	-		GFF2761	0.64	-1.1
2,793,400	+		GFF2761	0.66	+0.7
2,793,400	+		GFF2761	0.66	-1.2
2,793,400	+		GFF2761	0.66	-0.4
2,793,400	+		GFF2761	0.66	-0.2
2,793,406	+		GFF2761	0.67	-2.6
2,793,406	+		GFF2761	0.67	+0.3
2,793,408	-		GFF2761	0.67	-1.3
2,793,414	-		GFF2761	0.67	-1.7
2,793,419	-		GFF2761	0.68	+0.6
2,793,522	+		GFF2761	0.79	+0.7
2,793,522	+		GFF2761	0.79	+0.8
2,793,530	-		GFF2761	0.80	-1.4
2,793,541	+		GFF2761	0.81	-1.4
2,793,541	+		GFF2761	0.81	-1.7
2,793,547	+		GFF2761	0.82	-0.1
2,793,549	-		GFF2761	0.82	+0.4
2,793,549	-		GFF2761	0.82	+0.5
2,793,552	+		GFF2761	0.83	+0.7
2,793,560	-		GFF2761	0.84	-2.2
2,793,560	-		GFF2761	0.84	+0.1
2,793,595	+		GFF2761	0.87	-1.6
2,793,595	-		GFF2761	0.87	+0.5
2,793,603	-		GFF2761	0.88	+1.7
2,793,605	+		GFF2761	0.89	-1.0
2,793,608	-		GFF2761	0.89	+0.9
2,793,609	-		GFF2761	0.89	+1.0
2,793,659	+				-1.6
2,793,676	+				+0.4
2,793,737	-				+0.9
2,793,748	-				-0.2
2,793,761	+				+0.5
2,793,765	+				-1.6
2,793,765	+				+0.1
2,793,767	+				-0.8
2,793,774	-				+0.2
2,793,785	-				+0.5
2,793,809	+				-0.9
2,793,811	+				-0.8
2,793,817	-				+0.5
2,793,817	-				-1.2
2,793,821	+				+1.0
2,793,821	-				-1.2
2,793,821	-				+0.3
2,793,829	-				-1.5
2,793,839	+				+1.2
2,793,848	-				-0.0
2,793,903	+				-0.3
2,793,911	-				-0.7
2,793,911	-				+0.5
2,793,916	+				+0.3
2,793,916	+				-1.0
2,793,930	-				-1.2
2,793,931	+				+0.1
2,793,931	-				-0.4
2,793,935	+				-0.2
2,793,935	+				+0.6
2,793,943	-				-0.3
2,793,945	+				-1.9
2,793,945	+				-1.9
2,793,946	+				-1.0
2,793,946	+				-0.6
2,793,946	+				-3.0
2,793,946	+				-0.1
2,793,954	-				-1.4
2,793,954	-				+0.6
2,793,954	-				-0.9
2,793,954	-				+0.1
2,793,954	-				-0.7
2,793,954	-				+1.1
2,793,954	-				-0.7
2,793,954	-				+0.3
2,793,954	-				-0.7
2,793,954	-				-1.6
2,793,954	-				+0.2
2,793,954	-				-0.7
2,793,992	-				-0.4
2,794,015	-		GFF2762	0.11	-1.4
2,794,021	+		GFF2762	0.12	+1.3
2,794,024	-		GFF2762	0.12	+0.3
2,794,025	-		GFF2762	0.12	+0.5
2,794,027	+		GFF2762	0.12	-0.3
2,794,027	+		GFF2762	0.12	+0.2
2,794,035	-		GFF2762	0.13	-0.4
2,794,035	-		GFF2762	0.13	+0.1
2,794,035	-		GFF2762	0.13	+1.1
2,794,035	-		GFF2762	0.13	-2.1
2,794,038	+		GFF2762	0.13	+0.1
2,794,038	+		GFF2762	0.13	-0.4
2,794,038	+		GFF2762	0.13	-1.7
2,794,038	+		GFF2762	0.13	-0.3
2,794,038	+		GFF2762	0.13	+0.8
2,794,038	+		GFF2762	0.13	+1.2
2,794,038	+		GFF2762	0.13	+0.6
2,794,046	-		GFF2762	0.14	-0.8
2,794,046	-		GFF2762	0.14	+0.5
2,794,046	-		GFF2762	0.14	-1.6
2,794,046	-		GFF2762	0.14	-0.7
2,794,053	-		GFF2762	0.14	-0.2
2,794,063	+		GFF2762	0.15	-0.4
2,794,064	-		GFF2762	0.15	+0.4
2,794,086	-		GFF2762	0.17	-0.2
2,794,088	+		GFF2762	0.17	+0.4
2,794,090	+		GFF2762	0.17	-0.7
2,794,090	+		GFF2762	0.17	-1.6
2,794,090	+		GFF2762	0.17	-0.0
2,794,090	+		GFF2762	0.17	-0.6
2,794,090	+		GFF2762	0.17	-1.4
2,794,090	+		GFF2762	0.17	-0.1
2,794,091	-		GFF2762	0.17	-0.2
2,794,098	-		GFF2762	0.18	-0.1
2,794,098	-		GFF2762	0.18	-0.2
2,794,098	-		GFF2762	0.18	+0.5
2,794,098	-		GFF2762	0.18	-0.4
2,794,098	-		GFF2762	0.18	+0.2
2,794,100	+		GFF2762	0.18	-1.2
2,794,105	+		GFF2762	0.18	-0.6
2,794,108	-		GFF2762	0.18	-0.5
2,794,108	-		GFF2762	0.18	-0.2
2,794,152	+		GFF2762	0.22	-1.8
2,794,171	+		GFF2762	0.23	+0.8
2,794,171	+		GFF2762	0.23	+1.0
2,794,179	-		GFF2762	0.24	-0.1
2,794,202	+		GFF2762	0.25	+0.8
2,794,278	+		GFF2762	0.31	-0.6
2,794,278	+		GFF2762	0.31	+0.7
2,794,283	+		GFF2762	0.31	+0.4
2,794,283	+		GFF2762	0.31	-0.5
2,794,283	+		GFF2762	0.31	+1.0
2,794,283	+		GFF2762	0.31	+0.9
2,794,283	+		GFF2762	0.31	-1.2
2,794,283	+		GFF2762	0.31	-0.4
2,794,283	+		GFF2762	0.31	-2.6
2,794,283	+		GFF2762	0.31	+0.9
2,794,283	+		GFF2762	0.31	+0.3
2,794,283	+		GFF2762	0.31	-0.6
2,794,283	+		GFF2762	0.31	-0.0
2,794,283	+		GFF2762	0.31	-0.0
2,794,283	+		GFF2762	0.31	+0.2
2,794,283	+		GFF2762	0.31	-0.2
2,794,283	+		GFF2762	0.31	-1.5
2,794,283	+		GFF2762	0.31	+0.3
2,794,286	-		GFF2762	0.31	-1.0
2,794,286	-		GFF2762	0.31	-0.7
2,794,288	+		GFF2762	0.32	+0.4
2,794,288	+		GFF2762	0.32	+1.1
2,794,291	-		GFF2762	0.32	+0.2
2,794,291	-		GFF2762	0.32	+0.5
2,794,291	-		GFF2762	0.32	+0.4
2,794,291	-		GFF2762	0.32	-0.0
2,794,291	-		GFF2762	0.32	-2.3
2,794,291	-		GFF2762	0.32	+0.6
2,794,291	-		GFF2762	0.32	-0.7
2,794,291	-		GFF2762	0.32	-0.0
2,794,291	-		GFF2762	0.32	-2.1
2,794,291	-		GFF2762	0.32	-0.5
2,794,291	-		GFF2762	0.32	+0.4
2,794,291	-		GFF2762	0.32	+0.5
2,794,291	-		GFF2762	0.32	-0.3
2,794,291	-		GFF2762	0.32	-0.2
2,794,291	-		GFF2762	0.32	-1.3
2,794,291	-		GFF2762	0.32	-2.5
2,794,291	-		GFF2762	0.32	-1.1
2,794,291	-		GFF2762	0.32	-0.0
2,794,291	-		GFF2762	0.32	+0.9
2,794,291	-		GFF2762	0.32	-2.1
2,794,291	-		GFF2762	0.32	-2.2
2,794,291	-		GFF2762	0.32	-1.4
2,794,296	-		GFF2762	0.32	-0.8
2,794,296	-		GFF2762	0.32	+1.6
2,794,301	-		GFF2762	0.33	-1.1
2,794,325	+		GFF2762	0.34	-0.5
2,794,325	+		GFF2762	0.34	-0.3
2,794,338	-		GFF2762	0.35	+0.4
2,794,350	+		GFF2762	0.36	+0.5
2,794,354	+		GFF2762	0.36	-0.3
2,794,358	-		GFF2762	0.37	+1.2
2,794,360	+		GFF2762	0.37	+0.3
2,794,363	-		GFF2762	0.37	-1.4
2,794,401	+		GFF2762	0.40	-0.7
2,794,438	+		GFF2762	0.43	-0.4
2,794,449	+		GFF2762	0.43	+0.4
2,794,456	+		GFF2762	0.44	+0.1
2,794,456	+		GFF2762	0.44	+0.4
2,794,456	+		GFF2762	0.44	-1.5
2,794,456	+		GFF2762	0.44	+1.1
2,794,457	-		GFF2762	0.44	-2.3
2,794,457	-		GFF2762	0.44	+0.2
2,794,458	+		GFF2762	0.44	+0.7
2,794,464	-		GFF2762	0.45	+0.4
2,794,464	-		GFF2762	0.45	-0.2
2,794,464	-		GFF2762	0.45	-0.6
2,794,464	-		GFF2762	0.45	-1.0
2,794,464	-		GFF2762	0.45	+0.0
2,794,464	-		GFF2762	0.45	-0.6
2,794,468	+		GFF2762	0.45	+1.7
2,794,468	+		GFF2762	0.45	-0.6
2,794,472	-		GFF2762	0.45	+0.7
2,794,475	+		GFF2762	0.45	+0.7
2,794,476	-		GFF2762	0.45	-2.2
2,794,477	-		GFF2762	0.46	+0.2
2,794,509	+		GFF2762	0.48	-1.9
2,794,509	+		GFF2762	0.48	+0.2
2,794,528	+		GFF2762	0.49	-0.4
2,794,528	+		GFF2762	0.49	-0.7
2,794,528	+		GFF2762	0.49	-1.2
2,794,528	+		GFF2762	0.49	+0.2
2,794,528	+		GFF2762	0.49	+0.2
2,794,528	+		GFF2762	0.49	-0.1
2,794,528	+		GFF2762	0.49	+0.2
2,794,528	+		GFF2762	0.49	+0.0
2,794,528	+		GFF2762	0.49	-1.4
2,794,528	+		GFF2762	0.49	-1.0
2,794,528	+		GFF2762	0.49	+0.2
2,794,528	+		GFF2762	0.49	+0.1
2,794,528	+		GFF2762	0.49	-1.2
2,794,536	-		GFF2762	0.50	+0.0
2,794,536	-		GFF2762	0.50	+0.8
2,794,536	-		GFF2762	0.50	+0.4
2,794,536	-		GFF2762	0.50	-1.6
2,794,536	-		GFF2762	0.50	+0.1
2,794,536	-		GFF2762	0.50	-0.1
2,794,549	+		GFF2762	0.51	-0.0
2,794,551	-		GFF2762	0.51	+0.6
2,794,569	+		GFF2762	0.52	+0.7
2,794,569	+		GFF2762	0.52	-0.8
2,794,594	-		GFF2762	0.54	+0.0
2,794,626	+		GFF2762	0.56	+0.2
2,794,668	+		GFF2762	0.60	-0.2
2,794,668	+		GFF2762	0.60	-0.3
2,794,676	+		GFF2762	0.60	-0.9
2,794,676	-		GFF2762	0.60	+1.2
2,794,678	+		GFF2762	0.60	-0.1
2,794,678	+		GFF2762	0.60	-0.6
2,794,693	+		GFF2762	0.61	+0.5
2,794,702	-		GFF2762	0.62	+0.2
2,794,703	-		GFF2762	0.62	+0.4
2,794,722	-		GFF2762	0.64	-2.3
2,794,742	-		GFF2762	0.65	-0.4
2,794,752	+		GFF2762	0.66	+0.8
2,794,803	-		GFF2762	0.70	-2.5
2,794,818	+		GFF2762	0.71	-1.2
2,794,823	+		GFF2762	0.71	+0.4
2,794,823	+		GFF2762	0.71	-0.6
2,794,825	-		GFF2762	0.71	-2.5
2,794,826	-		GFF2762	0.71	-2.4
2,794,828	+		GFF2762	0.71	-1.2
2,794,831	-		GFF2762	0.72	-0.4
2,794,847	-		GFF2762	0.73	-1.0
2,794,848	+		GFF2762	0.73	+0.4
2,794,856	-		GFF2762	0.73	-0.6
2,794,863	+		GFF2762	0.74	-0.4
2,794,863	+		GFF2762	0.74	+0.7
2,794,863	+		GFF2762	0.74	-1.2
2,794,863	+		GFF2762	0.74	-0.5
2,794,863	+		GFF2762	0.74	+0.4
2,794,871	-		GFF2762	0.75	-0.9
2,794,871	-		GFF2762	0.75	+0.6
2,794,887	-		GFF2762	0.76	-0.8
2,794,904	+		GFF2762	0.77	-0.4
2,794,907	-		GFF2762	0.77	+0.2
2,794,907	-		GFF2762	0.77	+0.7
2,794,907	-		GFF2762	0.77	-0.8
2,794,909	+		GFF2762	0.77	+0.9
2,794,917	-		GFF2762	0.78	-0.2
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