Strain Fitness in Sphingobium sp. HT1-2 around GFF2263

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,289,408	-		GFF2261	0.21	-1.3
2,289,423	-		GFF2261	0.23	-0.4
2,289,428	-		GFF2261	0.23	+0.7
2,289,442	-		GFF2261	0.24	+1.0
2,289,445	+		GFF2261	0.25	-0.8
2,289,472	-		GFF2261	0.27	-0.3
2,289,539	+		GFF2261	0.34	-0.7
2,289,542	+		GFF2261	0.34	-0.0
2,289,543	+		GFF2261	0.34	-0.4
2,289,548	-		GFF2261	0.34	-0.1
2,289,548	-		GFF2261	0.34	+0.4
2,289,562	+		GFF2261	0.36	+1.5
2,289,566	+		GFF2261	0.36	+0.3
2,289,574	-		GFF2261	0.37	-1.1
2,289,575	-		GFF2261	0.37	+0.2
2,289,584	-		GFF2261	0.38	-0.8
2,289,623	+		GFF2261	0.42	-0.4
2,289,627	-		GFF2261	0.42	-0.2
2,289,647	+		GFF2261	0.44	-0.1
2,289,652	+		GFF2261	0.44	+0.2
2,289,652	+		GFF2261	0.44	+0.2
2,289,652	+		GFF2261	0.44	+0.3
2,289,652	+		GFF2261	0.44	+0.4
2,289,652	+		GFF2261	0.44	-0.3
2,289,660	-		GFF2261	0.45	-1.4
2,289,660	-		GFF2261	0.45	-0.4
2,289,660	-		GFF2261	0.45	+0.8
2,289,660	-		GFF2261	0.45	-0.3
2,289,660	-		GFF2261	0.45	+0.3
2,289,660	-		GFF2261	0.45	-0.2
2,289,660	-		GFF2261	0.45	-1.9
2,289,688	+		GFF2261	0.48	-1.7
2,289,696	+		GFF2261	0.48	+0.3
2,289,701	+		GFF2261	0.49	-0.6
2,289,704	-		GFF2261	0.49	-0.9
2,289,704	-		GFF2261	0.49	+0.7
2,289,709	-		GFF2261	0.50	-0.3
2,289,714	+		GFF2261	0.50	-1.1
2,289,714	-		GFF2261	0.50	+0.5
2,289,719	+		GFF2261	0.51	+0.4
2,289,719	+		GFF2261	0.51	-1.3
2,289,724	+		GFF2261	0.51	-0.2
2,289,724	+		GFF2261	0.51	+0.7
2,289,732	-		GFF2261	0.52	-0.1
2,289,739	-		GFF2261	0.53	-0.8
2,289,760	-		GFF2261	0.54	-0.3
2,289,775	-		GFF2261	0.56	-1.6
2,289,802	+		GFF2261	0.58	-1.3
2,289,823	+		GFF2261	0.60	+1.2
2,289,823	+		GFF2261	0.60	-0.0
2,289,831	-		GFF2261	0.61	-1.6
2,289,831	-		GFF2261	0.61	-1.2
2,289,851	+		GFF2261	0.63	-0.3
2,289,853	+		GFF2261	0.63	-0.2
2,289,861	-		GFF2261	0.64	-2.3
2,289,872	+		GFF2261	0.65	-1.8
2,289,882	+		GFF2261	0.66	-0.0
2,289,920	+		GFF2261	0.70	+0.6
2,289,922	-		GFF2261	0.70	+0.2
2,289,952	+		GFF2261	0.73	+0.3
2,289,980	+		GFF2261	0.75	-1.5
2,289,987	-		GFF2261	0.76	+0.3
2,290,000	-		GFF2261	0.77	+2.0
2,290,004	+		GFF2261	0.78	+0.8
2,290,004	+		GFF2261	0.78	-1.7
2,290,012	-		GFF2261	0.78	-0.2
2,290,012	-		GFF2261	0.78	-2.2
2,290,036	+		GFF2261	0.81	-2.0
2,290,054	+		GFF2261	0.82	-1.3
2,290,054	+		GFF2261	0.82	+0.1
2,290,067	-		GFF2261	0.83	+0.1
2,290,099	+		GFF2261	0.86	-1.3
2,290,099	+		GFF2261	0.86	-0.3
2,290,099	+		GFF2261	0.86	-0.4
2,290,099	+		GFF2261	0.86	+1.0
2,290,105	+		GFF2261	0.87	+0.7
2,290,105	+		GFF2261	0.87	-1.3
2,290,105	+		GFF2261	0.87	-0.6
2,290,107	-		GFF2261	0.87	-1.4
2,290,107	-		GFF2261	0.87	-0.9
2,290,107	-		GFF2261	0.87	-0.9
2,290,113	-		GFF2261	0.88	+1.1
2,290,113	-		GFF2261	0.88	+0.4
2,290,113	-		GFF2261	0.88	+1.0
2,290,113	-		GFF2261	0.88	-0.3
2,290,113	-		GFF2261	0.88	-2.1
2,290,113	-		GFF2261	0.88	-0.5
2,290,118	+		GFF2261	0.88	+0.7
2,290,152	-				-0.5
2,290,170	+				-1.3
2,290,170	+				-0.6
2,290,170	+				-0.9
2,290,170	+				+0.8
2,290,170	+				-1.2
2,290,170	+				-0.3
2,290,170	+				+0.9
2,290,178	-				-1.4
2,290,178	-				+0.4
2,290,178	-				+0.0
2,290,178	-				-0.4
2,290,178	-				-1.1
2,290,178	-				+0.4
2,290,221	-				-0.1
2,290,250	-				-0.7
2,290,307	+		GFF2262	0.54	-0.5
2,290,317	-		GFF2262	0.62	+0.4
2,290,322	-		GFF2262	0.67	-1.1
2,290,324	+		GFF2262	0.68	+0.8
2,290,327	-		GFF2262	0.71	+0.2
2,290,363	-				+1.6
2,290,505	+				+1.2
2,290,526	-				-0.8
2,290,549	+				-0.0
2,290,557	-				-0.4
2,290,561	+				+0.4
2,290,569	-				-0.2
2,290,572	+				+1.0
2,290,600	+				-0.1
2,290,600	+				-1.1
2,290,600	+				-0.5
2,290,608	-				-0.5
2,290,614	+				+0.1
2,290,616	+				-0.2
2,290,619	+				+0.3
2,290,624	-				+0.4
2,290,660	+				-1.2
2,290,661	-				-0.1
2,290,661	-				-1.9
2,290,661	-				+0.1
2,290,668	-				+0.0
2,290,668	-				-1.4
2,290,696	-		GFF2263	0.11	-1.0
2,290,696	-		GFF2263	0.11	+0.9
2,290,706	-		GFF2263	0.11	+0.7
2,290,710	+		GFF2263	0.11	-0.3
2,290,710	+		GFF2263	0.11	-0.5
2,290,710	+		GFF2263	0.11	-1.1
2,290,735	+		GFF2263	0.12	+0.5
2,290,735	+		GFF2263	0.12	+0.4
2,290,743	-		GFF2263	0.12	-0.1
2,290,752	+		GFF2263	0.13	-0.9
2,290,758	+		GFF2263	0.13	+0.0
2,290,758	+		GFF2263	0.13	-1.7
2,290,758	+		GFF2263	0.13	+1.5
2,290,762	+		GFF2263	0.13	-0.1
2,290,766	-		GFF2263	0.13	-0.3
2,290,766	-		GFF2263	0.13	+0.7
2,290,766	-		GFF2263	0.13	+0.8
2,290,766	-		GFF2263	0.13	+0.3
2,290,766	-		GFF2263	0.13	+0.2
2,290,766	-		GFF2263	0.13	+1.1
2,290,766	-		GFF2263	0.13	+1.1
2,290,776	-		GFF2263	0.13	-0.8
2,290,783	-		GFF2263	0.14	-1.2
2,290,785	+		GFF2263	0.14	-0.3
2,290,832	+		GFF2263	0.15	-1.2
2,290,836	-		GFF2263	0.16	-0.4
2,290,861	+		GFF2263	0.16	-1.0
2,290,869	-		GFF2263	0.17	-1.1
2,290,869	-		GFF2263	0.17	-0.0
2,290,869	-		GFF2263	0.17	-1.9
2,290,869	-		GFF2263	0.17	+0.6
2,290,876	+		GFF2263	0.17	+0.0
2,290,876	+		GFF2263	0.17	+1.0
2,290,876	-		GFF2263	0.17	+0.1
2,290,876	-		GFF2263	0.17	-0.0
2,290,889	-		GFF2263	0.17	-1.8
2,290,902	-		GFF2263	0.18	+0.9
2,290,908	-		GFF2263	0.18	-0.7
2,290,910	+		GFF2263	0.18	+0.1
2,290,918	-		GFF2263	0.18	-0.5
2,290,972	+		GFF2263	0.20	+0.4
2,290,972	+		GFF2263	0.20	+1.3
2,290,972	+		GFF2263	0.20	-0.5
2,290,972	+		GFF2263	0.20	+0.4
2,290,972	+		GFF2263	0.20	-0.1
2,290,980	+		GFF2263	0.21	+0.4
2,290,980	+		GFF2263	0.21	-0.6
2,290,980	+		GFF2263	0.21	-0.6
2,290,980	+		GFF2263	0.21	-0.4
2,290,980	+		GFF2263	0.21	-0.5
2,290,980	+		GFF2263	0.21	+0.4
2,290,980	-		GFF2263	0.21	+0.2
2,290,980	-		GFF2263	0.21	-0.3
2,290,980	-		GFF2263	0.21	+0.8
2,290,980	-		GFF2263	0.21	-0.9
2,290,980	-		GFF2263	0.21	+0.0
2,290,988	-		GFF2263	0.21	+0.3
2,290,988	-		GFF2263	0.21	-0.6
2,290,988	-		GFF2263	0.21	-2.1
2,290,988	-		GFF2263	0.21	-1.4
2,290,988	-		GFF2263	0.21	-0.2
2,290,990	+		GFF2263	0.21	+0.9
2,291,003	+		GFF2263	0.21	-1.0
2,291,004	+		GFF2263	0.21	+0.2
2,291,004	+		GFF2263	0.21	-0.7
2,291,004	+		GFF2263	0.21	-0.4
2,291,004	+		GFF2263	0.21	-1.6
2,291,004	+		GFF2263	0.21	+0.1
2,291,004	+		GFF2263	0.21	-2.8
2,291,004	+		GFF2263	0.21	-2.0
2,291,004	+		GFF2263	0.21	+0.2
2,291,004	+		GFF2263	0.21	+0.9
2,291,004	+		GFF2263	0.21	-0.3
2,291,012	-		GFF2263	0.22	-0.2
2,291,012	-		GFF2263	0.22	-0.5
2,291,012	-		GFF2263	0.22	-1.3
2,291,019	-		GFF2263	0.22	+0.5
2,291,042	-		GFF2263	0.23	+0.6
2,291,044	+		GFF2263	0.23	-0.9
2,291,075	+		GFF2263	0.24	-0.1
2,291,108	+		GFF2263	0.25	-1.3
2,291,116	-		GFF2263	0.25	-0.7
2,291,116	-		GFF2263	0.25	+0.2
2,291,118	+		GFF2263	0.25	+0.9
2,291,118	+		GFF2263	0.25	-0.5
2,291,118	+		GFF2263	0.25	-0.3
2,291,118	+		GFF2263	0.25	-1.1
2,291,118	+		GFF2263	0.25	+0.6
2,291,118	+		GFF2263	0.25	+0.7
2,291,118	+		GFF2263	0.25	-0.5
2,291,118	+		GFF2263	0.25	-0.3
2,291,118	+		GFF2263	0.25	-3.1
2,291,118	+		GFF2263	0.25	+0.4
2,291,118	+		GFF2263	0.25	+0.6
2,291,118	+		GFF2263	0.25	-0.6
2,291,118	+		GFF2263	0.25	+0.0
2,291,118	+		GFF2263	0.25	+0.4
2,291,126	-		GFF2263	0.26	+0.6
2,291,126	-		GFF2263	0.26	-0.0
2,291,126	-		GFF2263	0.26	-0.9
2,291,126	-		GFF2263	0.26	+1.3
2,291,126	-		GFF2263	0.26	-0.1
2,291,126	-		GFF2263	0.26	-0.8
2,291,126	-		GFF2263	0.26	-0.7
2,291,126	-		GFF2263	0.26	-0.0
2,291,126	-		GFF2263	0.26	+0.5
2,291,129	+		GFF2263	0.26	-2.5
2,291,137	-		GFF2263	0.26	-0.6
2,291,137	-		GFF2263	0.26	+0.4
2,291,137	-		GFF2263	0.26	-0.2
2,291,137	-		GFF2263	0.26	-0.4
2,291,142	+		GFF2263	0.26	+0.7
2,291,142	+		GFF2263	0.26	-1.5
2,291,155	-		GFF2263	0.27	-1.2
2,291,209	-		GFF2263	0.29	+0.2
2,291,235	-		GFF2263	0.30	-0.3
2,291,235	-		GFF2263	0.30	+0.6
2,291,246	-		GFF2263	0.30	+1.5
2,291,247	+		GFF2263	0.30	-0.3
2,291,264	-		GFF2263	0.31	-0.9
2,291,284	+		GFF2263	0.31	-0.0
2,291,304	+		GFF2263	0.32	+0.7
2,291,312	-		GFF2263	0.32	+1.6
2,291,317	-		GFF2263	0.33	+1.0
2,291,341	+		GFF2263	0.33	-1.1
2,291,370	+		GFF2263	0.34	-0.3
2,291,370	+		GFF2263	0.34	+0.4
2,291,370	+		GFF2263	0.34	-0.0
2,291,370	+		GFF2263	0.34	+0.0
2,291,370	+		GFF2263	0.34	-1.2
2,291,378	-		GFF2263	0.35	+0.2
2,291,378	-		GFF2263	0.35	-0.5
2,291,378	-		GFF2263	0.35	-0.4
2,291,378	-		GFF2263	0.35	+1.2
2,291,378	-		GFF2263	0.35	+1.0
2,291,378	-		GFF2263	0.35	-0.2
2,291,378	-		GFF2263	0.35	-1.5
2,291,387	+		GFF2263	0.35	+0.4
2,291,387	+		GFF2263	0.35	-0.3
2,291,387	+		GFF2263	0.35	-2.2
2,291,392	+		GFF2263	0.35	-0.5
2,291,399	-		GFF2263	0.35	-2.1
2,291,420	-		GFF2263	0.36	-0.7
2,291,448	+		GFF2263	0.37	+1.7
2,291,456	-		GFF2263	0.37	+0.5
2,291,456	-		GFF2263	0.37	-0.3
2,291,456	-		GFF2263	0.37	-0.7
2,291,506	+		GFF2263	0.39	-0.6
2,291,518	+		GFF2263	0.40	+0.3
2,291,593	-		GFF2263	0.42	+0.7
2,291,602	+		GFF2263	0.43	-0.2
2,291,604	+		GFF2263	0.43	-1.7
2,291,608	-		GFF2263	0.43	-1.3
2,291,615	+		GFF2263	0.43	-1.2
2,291,617	+		GFF2263	0.43	-0.7
2,291,623	+		GFF2263	0.43	-0.2
2,291,623	+		GFF2263	0.43	+1.2
2,291,625	+		GFF2263	0.43	-1.9
2,291,631	-		GFF2263	0.44	-0.5
2,291,647	+		GFF2263	0.44	+0.2
2,291,655	+		GFF2263	0.44	-0.2
2,291,663	-		GFF2263	0.45	-2.3
2,291,673	+		GFF2263	0.45	+0.5
2,291,680	+		GFF2263	0.45	-1.3
2,291,681	-		GFF2263	0.45	-0.1
2,291,681	-		GFF2263	0.45	+0.5
2,291,688	-		GFF2263	0.46	-1.2
2,291,689	+		GFF2263	0.46	+0.9
2,291,718	+		GFF2263	0.47	-0.4
2,291,718	+		GFF2263	0.47	-1.6
2,291,720	+		GFF2263	0.47	+0.1
2,291,720	+		GFF2263	0.47	-1.0
2,291,723	+		GFF2263	0.47	-0.0
2,291,726	+		GFF2263	0.47	+0.4
2,291,728	+		GFF2263	0.47	+0.8
2,291,728	-		GFF2263	0.47	-0.1
2,291,728	-		GFF2263	0.47	-0.5
2,291,740	+		GFF2263	0.47	-0.3
2,291,740	+		GFF2263	0.47	+0.5
2,291,748	-		GFF2263	0.48	-0.4
2,291,758	+		GFF2263	0.48	-1.7
2,291,766	-		GFF2263	0.48	-0.0
2,291,766	-		GFF2263	0.48	-0.4
2,291,806	+		GFF2263	0.50	+0.2
2,291,814	-		GFF2263	0.50	-0.7
2,291,828	+		GFF2263	0.51	-0.0
2,291,831	-		GFF2263	0.51	+0.8
2,291,842	+		GFF2263	0.51	-0.7
2,291,842	+		GFF2263	0.51	+0.3
2,291,842	+		GFF2263	0.51	-1.6
2,291,842	+		GFF2263	0.51	-1.5
2,291,845	-		GFF2263	0.51	+1.0
2,291,845	-		GFF2263	0.51	-0.5
2,291,850	-		GFF2263	0.51	+0.4
2,291,850	-		GFF2263	0.51	+1.1
2,291,870	-		GFF2263	0.52	+0.8
2,291,896	-		GFF2263	0.53	+0.3
2,291,915	-		GFF2263	0.54	-0.2
2,291,941	+		GFF2263	0.55	-0.9
2,291,954	+		GFF2263	0.55	-0.5
2,291,962	-		GFF2263	0.55	+1.2
2,291,975	-		GFF2263	0.56	+0.4
2,291,997	-		GFF2263	0.57	+0.3
2,292,003	-		GFF2263	0.57	-1.2
2,292,003	-		GFF2263	0.57	-0.3
2,292,010	+		GFF2263	0.57	-0.2
2,292,010	+		GFF2263	0.57	-1.2
2,292,010	+		GFF2263	0.57	+0.6
2,292,038	+		GFF2263	0.58	+0.1
2,292,046	-		GFF2263	0.58	+1.1
2,292,046	-		GFF2263	0.58	-0.6
2,292,046	-		GFF2263	0.58	+0.6
2,292,046	-		GFF2263	0.58	-0.6
2,292,051	-		GFF2263	0.58	-0.2
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