Strain Fitness in Sphingobium sp. HT1-2 around GFF2026

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,054,949	+		GFF2025	0.76	-1.0
2,054,950	-		GFF2025	0.76	-2.1
2,054,981	+		GFF2025	0.77	-1.8
2,054,981	+		GFF2025	0.77	+0.6
2,054,993	+		GFF2025	0.77	+0.3
2,054,993	+		GFF2025	0.77	+0.4
2,054,996	-		GFF2025	0.78	-0.3
2,055,028	+		GFF2025	0.79	-0.6
2,055,028	+		GFF2025	0.79	+0.6
2,055,028	+		GFF2025	0.79	+0.3
2,055,036	-		GFF2025	0.79	-0.3
2,055,036	-		GFF2025	0.79	+0.1
2,055,036	-		GFF2025	0.79	-0.3
2,055,036	-		GFF2025	0.79	-1.4
2,055,051	+		GFF2025	0.79	+0.2
2,055,051	+		GFF2025	0.79	-0.0
2,055,061	+		GFF2025	0.80	-0.5
2,055,061	+		GFF2025	0.80	+0.2
2,055,067	-		GFF2025	0.80	+0.0
2,055,069	-		GFF2025	0.80	+1.7
2,055,108	-		GFF2025	0.81	-0.9
2,055,121	-		GFF2025	0.82	-2.3
2,055,147	-		GFF2025	0.82	-0.4
2,055,167	+		GFF2025	0.83	+0.5
2,055,202	-		GFF2025	0.84	-2.4
2,055,210	-		GFF2025	0.84	-1.3
2,055,215	+		GFF2025	0.85	-0.6
2,055,221	+		GFF2025	0.85	-2.1
2,055,236	-		GFF2025	0.85	+0.6
2,055,249	+		GFF2025	0.86	-0.6
2,055,255	-		GFF2025	0.86	+0.3
2,055,263	+		GFF2025	0.86	-0.8
2,055,263	+		GFF2025	0.86	+1.8
2,055,263	+		GFF2025	0.86	+0.0
2,055,263	+		GFF2025	0.86	+1.4
2,055,263	+		GFF2025	0.86	-0.5
2,055,263	+		GFF2025	0.86	-0.4
2,055,263	+		GFF2025	0.86	-1.1
2,055,263	+		GFF2025	0.86	-0.5
2,055,271	-		GFF2025	0.86	-1.4
2,055,271	-		GFF2025	0.86	-1.7
2,055,271	-		GFF2025	0.86	+0.5
2,055,271	-		GFF2025	0.86	+0.1
2,055,271	-		GFF2025	0.86	-2.3
2,055,271	-		GFF2025	0.86	+0.2
2,055,271	-		GFF2025	0.86	+0.4
2,055,271	-		GFF2025	0.86	-1.5
2,055,271	-		GFF2025	0.86	-1.5
2,055,271	-		GFF2025	0.86	-0.1
2,055,281	-		GFF2025	0.87	+0.0
2,055,292	+		GFF2025	0.87	-0.5
2,055,299	+		GFF2025	0.87	-0.3
2,055,304	+		GFF2025	0.88	-1.1
2,055,309	+		GFF2025	0.88	-2.8
2,055,378	+		GFF2025	0.90	-0.3
2,055,378	-		GFF2025	0.90	-1.9
2,055,381	-				+0.8
2,055,400	-				-1.3
2,055,402	+				+0.6
2,055,415	-				-0.8
2,055,457	-				-1.7
2,055,486	+				-0.4
2,055,486	+				-2.2
2,055,486	+				-1.3
2,055,486	+				-1.7
2,055,494	-				-0.2
2,055,494	-				+0.4
2,055,494	-				-1.8
2,055,509	-				+0.8
2,055,509	-				+0.3
2,055,510	+				-0.3
2,055,521	+				+0.1
2,055,521	+				-1.4
2,055,529	-				-1.0
2,055,541	-				+1.0
2,055,543	+				-2.1
2,055,553	+				+0.3
2,055,558	+				-1.6
2,055,561	-				+0.3
2,055,566	-				+0.4
2,055,566	-				+1.0
2,055,577	-				-2.1
2,055,580	+				-0.3
2,055,586	+				+0.7
2,055,591	+				-0.3
2,055,594	-				+0.5
2,055,615	+				-0.5
2,055,639	-				-0.4
2,055,641	+				+0.9
2,055,657	+				-0.5
2,055,693	+				-1.8
2,055,701	-				-0.8
2,055,701	-				+0.1
2,055,724	+				-0.4
2,055,773	+				+0.0
2,055,773	+				+0.2
2,055,773	+				+0.1
2,055,773	+				+0.9
2,055,773	+				+0.5
2,055,775	-				+0.3
2,055,781	-				-1.8
2,055,781	-				-0.1
2,055,781	-				-1.4
2,055,781	-				-2.0
2,055,786	-				-0.8
2,055,791	+				+1.3
2,055,799	-				-1.1
2,055,799	-				-0.5
2,055,799	-				+0.3
2,055,806	-				-0.7
2,055,820	+				+1.1
2,055,820	+				-1.7
2,055,822	+				+0.4
2,055,828	-				-1.1
2,055,846	+				-0.3
2,055,868	-				-1.5
2,055,869	-				-1.1
2,055,881	-				-1.8
2,055,882	-				+0.4
2,055,936	-				-1.1
2,055,943	-				-0.9
2,055,943	-				-1.3
2,055,943	-				-0.2
2,055,987	-				-1.6
2,055,989	+				+0.6
2,055,999	+				+0.9
2,056,004	+				+0.1
2,056,004	+				-1.4
2,056,004	+				-0.5
2,056,012	-				-0.3
2,056,022	-				-0.9
2,056,025	+				+0.2
2,056,030	+				-0.3
2,056,030	+				-1.9
2,056,033	-				-0.7
2,056,033	-				+0.6
2,056,051	+				-0.3
2,056,059	-				+0.1
2,056,075	+				-1.9
2,056,075	+				-0.6
2,056,083	-				+1.0
2,056,088	+				-1.6
2,056,094	+		GFF2026	0.10	+0.3
2,056,107	-		GFF2026	0.11	-0.3
2,056,131	-		GFF2026	0.12	-0.5
2,056,131	-		GFF2026	0.12	+0.5
2,056,164	-		GFF2026	0.15	+1.2
2,056,164	-		GFF2026	0.15	+0.4
2,056,201	-		GFF2026	0.17	-1.3
2,056,220	+		GFF2026	0.18	-0.7
2,056,241	-		GFF2026	0.19	-0.4
2,056,241	-		GFF2026	0.19	-0.7
2,056,256	+		GFF2026	0.20	+0.4
2,056,256	+		GFF2026	0.20	-2.6
2,056,264	-		GFF2026	0.21	-2.0
2,056,275	-		GFF2026	0.21	-0.2
2,056,288	+		GFF2026	0.22	+0.5
2,056,288	+		GFF2026	0.22	-0.4
2,056,296	-		GFF2026	0.23	+0.8
2,056,296	-		GFF2026	0.23	-0.2
2,056,296	-		GFF2026	0.23	-1.1
2,056,296	-		GFF2026	0.23	-1.9
2,056,296	-		GFF2026	0.23	-0.7
2,056,296	-		GFF2026	0.23	+1.6
2,056,326	-		GFF2026	0.24	-0.1
2,056,340	+		GFF2026	0.25	-1.5
2,056,345	+		GFF2026	0.26	+2.3
2,056,353	-		GFF2026	0.26	-1.4
2,056,353	-		GFF2026	0.26	+0.8
2,056,353	-		GFF2026	0.26	-0.4
2,056,365	+		GFF2026	0.27	-0.2
2,056,385	+		GFF2026	0.28	+0.6
2,056,390	+		GFF2026	0.28	+0.2
2,056,417	+		GFF2026	0.30	-0.5
2,056,427	+		GFF2026	0.31	+0.0
2,056,430	-		GFF2026	0.31	+0.7
2,056,430	-		GFF2026	0.31	-1.7
2,056,445	+		GFF2026	0.32	-1.5
2,056,460	+		GFF2026	0.33	-1.8
2,056,470	+		GFF2026	0.33	-2.2
2,056,472	+		GFF2026	0.33	-0.9
2,056,473	+		GFF2026	0.34	+0.3
2,056,473	+		GFF2026	0.34	-0.2
2,056,488	+		GFF2026	0.34	+0.5
2,056,488	+		GFF2026	0.34	-2.6
2,056,503	+		GFF2026	0.35	+0.2
2,056,540	-		GFF2026	0.38	-0.9
2,056,565	+		GFF2026	0.39	-0.3
2,056,574	-		GFF2026	0.40	-0.4
2,056,583	+		GFF2026	0.40	-1.9
2,056,589	-		GFF2026	0.41	-2.0
2,056,589	-		GFF2026	0.41	-0.9
2,056,589	-		GFF2026	0.41	+0.0
2,056,591	-		GFF2026	0.41	-1.1
2,056,598	+		GFF2026	0.41	+0.7
2,056,606	-		GFF2026	0.42	+1.3
2,056,606	-		GFF2026	0.42	+0.0
2,056,627	+		GFF2026	0.43	-0.1
2,056,649	+		GFF2026	0.44	+1.0
2,056,649	+		GFF2026	0.44	-1.1
2,056,654	-		GFF2026	0.45	-0.5
2,056,657	-		GFF2026	0.45	+0.2
2,056,657	-		GFF2026	0.45	-1.1
2,056,657	-		GFF2026	0.45	+0.4
2,056,662	-		GFF2026	0.45	-0.4
2,056,662	-		GFF2026	0.45	-0.2
2,056,677	-		GFF2026	0.46	+0.6
2,056,679	-		GFF2026	0.46	-1.3
2,056,688	+		GFF2026	0.47	-0.1
2,056,688	+		GFF2026	0.47	-0.8
2,056,688	+		GFF2026	0.47	-2.1
2,056,693	+		GFF2026	0.47	+0.8
2,056,696	-		GFF2026	0.47	-0.5
2,056,696	-		GFF2026	0.47	-0.6
2,056,701	-		GFF2026	0.48	-0.8
2,056,735	+		GFF2026	0.50	-0.6
2,056,742	+		GFF2026	0.50	+0.0
2,056,742	+		GFF2026	0.50	-1.1
2,056,742	+		GFF2026	0.50	-1.5
2,056,750	-		GFF2026	0.51	+0.7
2,056,750	-		GFF2026	0.51	-0.3
2,056,754	+		GFF2026	0.51	-0.1
2,056,759	+		GFF2026	0.51	-1.6
2,056,762	-		GFF2026	0.51	+1.6
2,056,768	-		GFF2026	0.52	-0.1
2,056,795	+		GFF2026	0.53	+0.4
2,056,898	-		GFF2026	0.60	+0.1
2,056,905	-		GFF2026	0.60	-1.6
2,056,930	-		GFF2026	0.62	-0.8
2,056,935	-		GFF2026	0.62	+0.2
2,056,978	-		GFF2026	0.65	+0.5
2,056,985	+		GFF2026	0.65	-0.1
2,056,985	+		GFF2026	0.65	+0.7
2,056,990	+		GFF2026	0.65	+0.2
2,056,990	+		GFF2026	0.65	-0.3
2,056,993	-		GFF2026	0.65	-0.7
2,056,995	+		GFF2026	0.66	+0.7
2,056,998	-		GFF2026	0.66	+0.2
2,057,020	+		GFF2026	0.67	+0.1
2,057,031	-		GFF2026	0.68	+0.7
2,057,032	-		GFF2026	0.68	-1.6
2,057,047	+		GFF2026	0.69	-0.5
2,057,048	-		GFF2026	0.69	-1.2
2,057,054	+		GFF2026	0.69	-0.5
2,057,056	-		GFF2026	0.69	-0.9
2,057,056	-		GFF2026	0.69	-0.3
2,057,074	+		GFF2026	0.70	+0.9
2,057,075	-		GFF2026	0.71	-1.6
2,057,084	+		GFF2026	0.71	+0.1
2,057,089	+		GFF2026	0.71	-0.5
2,057,089	+		GFF2026	0.71	+0.6
2,057,089	+		GFF2026	0.71	-0.1
2,057,089	+		GFF2026	0.71	-0.7
2,057,089	+		GFF2026	0.71	-0.3
2,057,097	-		GFF2026	0.72	-0.4
2,057,097	-		GFF2026	0.72	-0.5
2,057,097	-		GFF2026	0.72	-1.1
2,057,097	-		GFF2026	0.72	-0.4
2,057,097	-		GFF2026	0.72	-2.3
2,057,102	-		GFF2026	0.72	-2.3
2,057,102	-		GFF2026	0.72	+1.5
2,057,102	-		GFF2026	0.72	-0.7
2,057,108	+		GFF2026	0.73	+0.7
2,057,111	-		GFF2026	0.73	+1.0
2,057,116	-		GFF2026	0.73	+0.0
2,057,116	-		GFF2026	0.73	+0.5
2,057,124	+		GFF2026	0.74	+1.2
2,057,135	-		GFF2026	0.74	+1.0
2,057,193	-		GFF2026	0.78	+0.9
2,057,195	+		GFF2026	0.78	-1.7
2,057,195	+		GFF2026	0.78	-1.1
2,057,203	-		GFF2026	0.78	+0.4
2,057,208	+		GFF2026	0.79	+0.5
2,057,213	+		GFF2026	0.79	-1.4
2,057,213	+		GFF2026	0.79	-0.3
2,057,213	+		GFF2026	0.79	+0.5
2,057,219	-		GFF2026	0.79	-2.6
2,057,221	-		GFF2026	0.80	+0.2
2,057,221	-		GFF2026	0.80	+1.3
2,057,221	-		GFF2026	0.80	+0.9
2,057,221	-		GFF2026	0.80	-0.5
2,057,221	-		GFF2026	0.80	+0.6
2,057,221	-		GFF2026	0.80	-0.6
2,057,221	-		GFF2026	0.80	+0.7
2,057,221	-		GFF2026	0.80	+0.5
2,057,221	-		GFF2026	0.80	-0.3
2,057,221	-		GFF2026	0.80	+0.1
2,057,221	-		GFF2026	0.80	-0.5
2,057,221	-		GFF2026	0.80	+0.5
2,057,277	+		GFF2026	0.83	-1.3
2,057,277	+		GFF2026	0.83	-0.5
2,057,277	+		GFF2026	0.83	-0.3
2,057,277	+		GFF2026	0.83	-1.3
2,057,277	+		GFF2026	0.83	+0.1
2,057,279	-		GFF2026	0.83	+0.9
2,057,282	+		GFF2026	0.83	-0.1
2,057,285	-		GFF2026	0.83	-0.1
2,057,285	-		GFF2026	0.83	+0.1
2,057,285	-		GFF2026	0.83	-1.3
2,057,285	-		GFF2026	0.83	-0.4
2,057,285	-		GFF2026	0.83	+0.7
2,057,285	-		GFF2026	0.83	+0.4
2,057,285	-		GFF2026	0.83	-1.1
2,057,285	-		GFF2026	0.83	-1.1
2,057,285	-		GFF2026	0.83	+0.0
2,057,294	+		GFF2026	0.84	+0.4
2,057,294	+		GFF2026	0.84	-0.5
2,057,328	+		GFF2026	0.86	-0.4
2,057,328	+		GFF2026	0.86	+0.1
2,057,336	-		GFF2026	0.87	-1.0
2,057,343	+		GFF2026	0.87	-0.8
2,057,346	+		GFF2026	0.87	-0.0
2,057,346	-		GFF2026	0.87	-1.8
2,057,346	-		GFF2026	0.87	+0.6
2,057,348	+		GFF2026	0.87	-0.2
2,057,351	-		GFF2026	0.88	+0.5
2,057,351	-		GFF2026	0.88	-0.2
2,057,351	-		GFF2026	0.88	+0.2
2,057,351	-		GFF2026	0.88	-0.4
2,057,361	-		GFF2026	0.88	+0.6
2,057,366	-		GFF2026	0.88	-0.7
2,057,375	+		GFF2026	0.89	-1.2
2,057,383	-		GFF2026	0.89	-1.1
2,057,383	-		GFF2026	0.89	-0.5
2,057,383	-		GFF2026	0.89	+1.4
2,057,383	-		GFF2026	0.89	+1.0
2,057,404	+				+0.5
2,057,425	-				-1.8
2,057,441	-				-0.5
2,057,452	-				-1.4
2,057,452	-				-0.0
2,057,510	-				-2.8
2,057,527	+				+1.0
2,057,541	+				-1.0
2,057,541	+				-0.4
2,057,560	+				-0.1
2,057,620	+				-0.4
2,057,620	+				+0.2
2,057,620	+				+0.3
2,057,628	-				-0.7
2,057,628	-				+0.1
2,057,628	-				-1.8
2,057,628	-				-1.1
2,057,640	-		GFF2027	0.11	+0.0
2,057,641	+		GFF2027	0.11	+1.0
2,057,644	-		GFF2027	0.12	+0.6
2,057,649	-		GFF2027	0.12	+0.5
2,057,657	-		GFF2027	0.13	-1.1
2,057,693	+		GFF2027	0.18	+0.3
2,057,701	-		GFF2027	0.19	-0.3
2,057,708	+		GFF2027	0.20	+0.7
2,057,751	-		GFF2027	0.26	-0.6
2,057,773	+		GFF2027	0.29	+0.3
2,057,797	+		GFF2027	0.32	-1.8
2,057,797	-		GFF2027	0.32	+1.2
2,057,799	+		GFF2027	0.32	+0.6
2,057,813	-		GFF2027	0.34	-2.8
2,057,819	-		GFF2027	0.35	+0.4
2,057,858	-		GFF2027	0.40	-0.5
2,057,910	-		GFF2027	0.47	+0.5
2,057,920	-		GFF2027	0.48	+0.6
2,057,938	+		GFF2027	0.50	-0.3
2,057,939	+		GFF2027	0.50	-1.1
2,057,940	-		GFF2027	0.50	+0.5
2,057,947	-		GFF2027	0.51	-0.2
2,057,971	-		GFF2027	0.55	-0.1
2,058,002	-		GFF2027	0.59	+0.7
2,058,005	+		GFF2027	0.59	-0.1
2,058,013	-		GFF2027	0.60	-0.4
2,058,026	+		GFF2027	0.62	-1.1
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