Strain Fitness in Sphingobium sp. HT1-2 around GFF1082

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,086,737	+				-0.3
1,086,738	-				+1.1
1,086,743	-				+1.8
1,086,756	-		GFF1080	0.10	+0.0
1,086,766	-		GFF1080	0.11	-0.9
1,086,770	+		GFF1080	0.12	+1.7
1,086,770	+		GFF1080	0.12	-0.3
1,086,778	-		GFF1080	0.13	-2.0
1,086,793	+		GFF1080	0.15	-0.6
1,086,808	+		GFF1080	0.17	+0.2
1,086,814	+		GFF1080	0.18	-0.3
1,086,814	+		GFF1080	0.18	+0.7
1,086,814	+		GFF1080	0.18	-1.5
1,086,814	-		GFF1080	0.18	+0.7
1,086,816	+		GFF1080	0.19	-0.7
1,086,822	-		GFF1080	0.19	+0.8
1,086,822	-		GFF1080	0.19	-0.3
1,086,822	-		GFF1080	0.19	+1.2
1,086,822	-		GFF1080	0.19	-0.8
1,086,822	-		GFF1080	0.19	+0.8
1,086,823	-		GFF1080	0.19	-1.2
1,086,825	+		GFF1080	0.20	-1.3
1,086,829	-		GFF1080	0.20	-0.9
1,086,834	+		GFF1080	0.21	-1.6
1,086,834	+		GFF1080	0.21	-2.1
1,086,857	-		GFF1080	0.24	+0.3
1,086,857	-		GFF1080	0.24	+0.7
1,086,877	-		GFF1080	0.27	+1.1
1,086,884	+		GFF1080	0.28	+0.2
1,086,884	+		GFF1080	0.28	+0.6
1,086,884	+		GFF1080	0.28	-0.2
1,086,884	+		GFF1080	0.28	+1.0
1,086,884	+		GFF1080	0.28	-0.2
1,086,884	+		GFF1080	0.28	+0.2
1,086,884	+		GFF1080	0.28	-1.5
1,086,884	+		GFF1080	0.28	+0.2
1,086,891	+		GFF1080	0.29	+0.7
1,086,892	-		GFF1080	0.29	+1.0
1,086,892	-		GFF1080	0.29	-1.7
1,086,892	-		GFF1080	0.29	-1.3
1,086,892	-		GFF1080	0.29	+0.6
1,086,893	+		GFF1080	0.29	+0.4
1,086,895	+		GFF1080	0.30	-1.2
1,086,912	+		GFF1080	0.32	-1.5
1,086,926	-		GFF1080	0.34	-1.2
1,086,933	+		GFF1080	0.35	-0.4
1,086,941	-		GFF1080	0.36	-0.4
1,086,941	-		GFF1080	0.36	+0.2
1,086,941	-		GFF1080	0.36	-1.2
1,086,952	+		GFF1080	0.38	+1.1
1,086,953	+		GFF1080	0.38	-0.8
1,086,953	+		GFF1080	0.38	-1.2
1,086,960	+		GFF1080	0.39	+0.5
1,086,960	+		GFF1080	0.39	+0.3
1,086,960	+		GFF1080	0.39	+0.3
1,086,960	+		GFF1080	0.39	-2.1
1,086,960	+		GFF1080	0.39	+0.9
1,086,960	+		GFF1080	0.39	-1.6
1,086,960	-		GFF1080	0.39	+1.2
1,086,960	-		GFF1080	0.39	+1.0
1,086,965	+		GFF1080	0.40	-0.8
1,086,965	+		GFF1080	0.40	-0.3
1,086,968	-		GFF1080	0.40	-1.5
1,086,968	-		GFF1080	0.40	+1.1
1,086,978	+		GFF1080	0.41	+1.3
1,087,005	+		GFF1080	0.45	-2.2
1,087,053	+		GFF1080	0.52	-0.3
1,087,056	+		GFF1080	0.52	-1.1
1,087,056	-		GFF1080	0.52	+0.7
1,087,061	-		GFF1080	0.53	-0.7
1,087,093	+		GFF1080	0.58	+0.1
1,087,100	+		GFF1080	0.59	-0.4
1,087,101	+		GFF1080	0.59	+0.2
1,087,101	+		GFF1080	0.59	-0.3
1,087,108	-		GFF1080	0.60	+0.2
1,087,114	-		GFF1080	0.61	-0.2
1,087,118	-		GFF1080	0.61	+0.1
1,087,119	-		GFF1080	0.61	+0.1
1,087,119	-		GFF1080	0.61	+0.1
1,087,121	+		GFF1080	0.62	-0.1
1,087,121	+		GFF1080	0.62	+1.1
1,087,121	+		GFF1080	0.62	-0.1
1,087,129	-		GFF1080	0.63	-2.1
1,087,131	+		GFF1080	0.63	-0.5
1,087,139	+		GFF1080	0.64	-0.5
1,087,139	-		GFF1080	0.64	-0.5
1,087,139	-		GFF1080	0.64	-0.2
1,087,147	-		GFF1080	0.65	-0.0
1,087,150	+		GFF1080	0.66	+0.2
1,087,158	-		GFF1080	0.67	-2.7
1,087,165	-		GFF1080	0.68	+0.3
1,087,174	-		GFF1080	0.69	-1.2
1,087,184	-		GFF1080	0.70	+0.3
1,087,184	-		GFF1080	0.70	-1.6
1,087,184	-		GFF1080	0.70	-0.6
1,087,250	-		GFF1080	0.80	-1.9
1,087,263	-		GFF1080	0.82	+1.0
1,087,264	+		GFF1080	0.82	+1.9
1,087,274	+		GFF1080	0.83	-1.3
1,087,284	+		GFF1080	0.85	+0.2
1,087,287	-		GFF1080	0.85	+0.2
1,087,287	-		GFF1080	0.85	+0.3
1,087,312	+		GFF1080	0.89	+1.1
1,087,340	+				-0.3
1,087,342	+				-0.6
1,087,346	+				-0.2
1,087,346	+				-0.7
1,087,348	-				-0.8
1,087,354	-				-0.2
1,087,362	+				+1.0
1,087,386	+				+0.4
1,087,429	+		GFF1081	0.14	+0.3
1,087,429	-		GFF1081	0.14	-0.4
1,087,429	-		GFF1081	0.14	+0.5
1,087,475	-		GFF1081	0.33	-0.7
1,087,475	-		GFF1081	0.33	-0.9
1,087,491	+		GFF1081	0.40	-0.5
1,087,498	-		GFF1081	0.42	-1.3
1,087,507	+		GFF1081	0.46	-0.2
1,087,507	+		GFF1081	0.46	-0.9
1,087,512	+		GFF1081	0.48	-0.0
1,087,515	-		GFF1081	0.49	+0.5
1,087,536	+		GFF1081	0.58	+0.2
1,087,536	+		GFF1081	0.58	+0.1
1,087,536	+		GFF1081	0.58	+0.4
1,087,536	+		GFF1081	0.58	+1.1
1,087,544	-		GFF1081	0.61	-1.2
1,087,544	-		GFF1081	0.61	-0.5
1,087,544	-		GFF1081	0.61	+0.0
1,087,544	-		GFF1081	0.61	+0.7
1,087,550	+		GFF1081	0.64	+0.7
1,087,550	+		GFF1081	0.64	-0.6
1,087,550	+		GFF1081	0.64	+0.1
1,087,558	-		GFF1081	0.67	-1.2
1,087,558	-		GFF1081	0.67	-1.2
1,087,558	-		GFF1081	0.67	-0.3
1,087,569	+		GFF1081	0.72	-0.0
1,087,583	-		GFF1081	0.77	-0.2
1,087,603	-		GFF1081	0.86	+0.8
1,087,610	+		GFF1081	0.88	+0.1
1,087,637	+				+1.0
1,087,654	+				+0.7
1,087,662	-				+0.2
1,087,690	+				+1.6
1,087,742	-				+0.6
1,087,743	+				-1.3
1,087,756	+				+0.3
1,087,764	-				-1.7
1,087,774	-				-0.9
1,087,793	-				-1.3
1,087,793	-				-0.3
1,087,797	+				-1.8
1,087,819	-		GFF1082	0.11	+0.5
1,087,826	+		GFF1082	0.11	+0.0
1,087,834	-		GFF1082	0.12	-1.7
1,087,834	-		GFF1082	0.12	-0.6
1,087,834	-		GFF1082	0.12	-1.3
1,087,857	-		GFF1082	0.15	-1.6
1,087,872	+		GFF1082	0.16	-1.6
1,087,880	-		GFF1082	0.17	-1.1
1,087,882	+		GFF1082	0.18	+1.1
1,087,882	+		GFF1082	0.18	+1.6
1,087,882	+		GFF1082	0.18	+0.1
1,087,886	-		GFF1082	0.18	-0.8
1,087,890	-		GFF1082	0.18	+1.0
1,087,890	-		GFF1082	0.18	+1.1
1,087,890	-		GFF1082	0.18	+0.2
1,087,890	-		GFF1082	0.18	-0.1
1,087,890	-		GFF1082	0.18	-0.5
1,087,890	-		GFF1082	0.18	+1.5
1,087,890	-		GFF1082	0.18	-1.3
1,087,909	-		GFF1082	0.21	+0.2
1,087,913	+		GFF1082	0.21	-1.0
1,087,913	+		GFF1082	0.21	-1.2
1,087,921	-		GFF1082	0.22	-1.2
1,087,921	-		GFF1082	0.22	+1.9
1,087,944	+		GFF1082	0.24	-0.3
1,087,946	-		GFF1082	0.25	+1.0
1,087,952	+		GFF1082	0.25	-1.5
1,087,952	+		GFF1082	0.25	+1.7
1,087,952	+		GFF1082	0.25	-1.5
1,087,973	-		GFF1082	0.28	-0.3
1,087,975	-		GFF1082	0.28	-0.8
1,087,987	+		GFF1082	0.29	-0.8
1,087,988	-		GFF1082	0.29	-0.4
1,087,988	-		GFF1082	0.29	-0.5
1,087,988	-		GFF1082	0.29	-0.1
1,087,997	-		GFF1082	0.30	+0.8
1,088,013	+		GFF1082	0.32	-0.5
1,088,021	-		GFF1082	0.33	+0.8
1,088,023	+		GFF1082	0.33	-0.1
1,088,028	+		GFF1082	0.34	-0.1
1,088,028	+		GFF1082	0.34	-1.3
1,088,031	-		GFF1082	0.34	+0.5
1,088,031	-		GFF1082	0.34	-0.5
1,088,036	-		GFF1082	0.35	-1.8
1,088,036	-		GFF1082	0.35	+0.3
1,088,036	-		GFF1082	0.35	+0.4
1,088,055	+		GFF1082	0.37	-1.6
1,088,068	-		GFF1082	0.38	+0.4
1,088,072	-		GFF1082	0.39	-1.5
1,088,107	+		GFF1082	0.43	-0.3
1,088,107	+		GFF1082	0.43	-1.3
1,088,117	+		GFF1082	0.44	+0.1
1,088,140	-		GFF1082	0.46	+1.3
1,088,140	-		GFF1082	0.46	-0.2
1,088,140	-		GFF1082	0.46	+0.9
1,088,180	+		GFF1082	0.51	-2.5
1,088,188	-		GFF1082	0.52	-0.0
1,088,193	-		GFF1082	0.52	-0.7
1,088,205	+		GFF1082	0.53	+0.7
1,088,205	+		GFF1082	0.53	-1.7
1,088,205	+		GFF1082	0.53	-1.3
1,088,205	+		GFF1082	0.53	-0.6
1,088,205	+		GFF1082	0.53	-0.2
1,088,211	-		GFF1082	0.54	+0.4
1,088,213	-		GFF1082	0.54	-1.6
1,088,213	-		GFF1082	0.54	+0.5
1,088,213	-		GFF1082	0.54	-0.3
1,088,222	+		GFF1082	0.55	+0.2
1,088,222	+		GFF1082	0.55	+0.7
1,088,222	+		GFF1082	0.55	-0.5
1,088,222	+		GFF1082	0.55	+1.7
1,088,230	-		GFF1082	0.56	+0.1
1,088,230	-		GFF1082	0.56	-1.6
1,088,240	+		GFF1082	0.57	-0.3
1,088,270	+		GFF1082	0.61	+0.7
1,088,291	+		GFF1082	0.63	+0.5
1,088,296	-		GFF1082	0.64	+1.2
1,088,298	+		GFF1082	0.64	+0.9
1,088,298	+		GFF1082	0.64	-2.7
1,088,298	+		GFF1082	0.64	-0.1
1,088,306	-		GFF1082	0.65	-0.2
1,088,306	-		GFF1082	0.65	+0.0
1,088,308	+		GFF1082	0.65	+0.8
1,088,308	+		GFF1082	0.65	-0.2
1,088,316	-		GFF1082	0.66	-0.5
1,088,316	-		GFF1082	0.66	-1.1
1,088,316	-		GFF1082	0.66	+0.2
1,088,316	-		GFF1082	0.66	+1.0
1,088,316	-		GFF1082	0.66	-1.2
1,088,316	-		GFF1082	0.66	+0.1
1,088,317	-		GFF1082	0.66	-1.6
1,088,324	-		GFF1082	0.67	-0.1
1,088,355	+		GFF1082	0.70	-0.1
1,088,404	+		GFF1082	0.76	+1.1
1,088,404	+		GFF1082	0.76	+0.1
1,088,404	+		GFF1082	0.76	-0.2
1,088,404	+		GFF1082	0.76	-0.4
1,088,409	+		GFF1082	0.76	-0.6
1,088,409	+		GFF1082	0.76	+0.7
1,088,412	-		GFF1082	0.76	-1.3
1,088,412	-		GFF1082	0.76	+0.2
1,088,412	-		GFF1082	0.76	-0.7
1,088,412	-		GFF1082	0.76	+1.4
1,088,414	+		GFF1082	0.77	-1.8
1,088,415	+		GFF1082	0.77	+0.7
1,088,417	-		GFF1082	0.77	-0.4
1,088,417	-		GFF1082	0.77	+0.5
1,088,422	-		GFF1082	0.78	-1.7
1,088,422	-		GFF1082	0.78	-0.3
1,088,423	-		GFF1082	0.78	+0.2
1,088,423	-		GFF1082	0.78	-1.0
1,088,423	-		GFF1082	0.78	-0.6
1,088,449	+		GFF1082	0.81	-0.7
1,088,492	+		GFF1082	0.85	-0.6
1,088,492	-		GFF1082	0.85	+0.3
1,088,497	+		GFF1082	0.86	+1.0
1,088,497	+		GFF1082	0.86	-2.1
1,088,500	-		GFF1082	0.86	+0.9
1,088,500	-		GFF1082	0.86	+0.1
1,088,500	-		GFF1082	0.86	+1.1
1,088,514	-		GFF1082	0.88	+0.4
1,088,516	-		GFF1082	0.88	+0.9
1,088,532	+		GFF1082	0.90	-0.4
1,088,555	+				-0.4
1,088,555	+				-0.2
1,088,580	+				-1.2
1,088,580	+				+0.4
1,088,588	-				-0.8
1,088,593	-				-0.1
1,088,597	+				+0.3
1,088,597	-				-0.8
1,088,598	-				-2.3
1,088,605	-				-0.9
1,088,605	-				+0.7
1,088,606	+				-0.8
1,088,607	+				-0.8
1,088,611	+				+0.8
1,088,611	+				-0.1
1,088,632	+				+0.1
1,088,632	+				-1.2
1,088,632	+				-1.6
1,088,632	+				+1.0
1,088,632	+				+0.6
1,088,632	+				+0.9
1,088,632	+				-2.0
1,088,632	+				+1.0
1,088,640	-				+0.7
1,088,640	-				-1.0
1,088,640	-				+2.1
1,088,640	-				+0.2
1,088,640	-				-0.8
1,088,640	-				-0.6
1,088,651	+				+1.6
1,088,651	+				+0.7
1,088,651	+				-0.4
1,088,651	+				+0.1
1,088,656	+				+0.1
1,088,659	-				-0.8
1,088,702	+		GFF1083	0.10	-1.8
1,088,710	-		GFF1083	0.12	-1.5
1,088,724	+		GFF1083	0.13	-0.4
1,088,729	+		GFF1083	0.14	-0.4
1,088,732	-		GFF1083	0.14	-1.1
1,088,737	-		GFF1083	0.15	+0.4
1,088,747	+		GFF1083	0.16	-1.7
1,088,747	+		GFF1083	0.16	-0.4
1,088,747	+		GFF1083	0.16	-0.6
1,088,755	-		GFF1083	0.18	-0.0
1,088,755	-		GFF1083	0.18	-0.3
1,088,755	-		GFF1083	0.18	+0.8
1,088,755	-		GFF1083	0.18	-1.6
1,088,764	+		GFF1083	0.19	-0.7
1,088,764	+		GFF1083	0.19	+0.5
1,088,766	-		GFF1083	0.19	-0.4
1,088,770	+		GFF1083	0.20	-2.5
1,088,778	-		GFF1083	0.21	+1.4
1,088,780	+		GFF1083	0.21	+0.7
1,088,785	+		GFF1083	0.22	-0.1
1,088,788	-		GFF1083	0.22	+0.0
1,088,790	+		GFF1083	0.22	-0.8
1,088,792	+		GFF1083	0.22	+1.1
1,088,792	+		GFF1083	0.22	-0.6
1,088,793	-		GFF1083	0.23	+0.1
1,088,800	-		GFF1083	0.24	-1.6
1,088,800	-		GFF1083	0.24	-0.6
1,088,800	-		GFF1083	0.24	-1.3
1,088,815	+		GFF1083	0.25	-0.7
1,088,818	-		GFF1083	0.26	+0.4
1,088,833	+		GFF1083	0.28	+0.1
1,088,841	+		GFF1083	0.29	+0.7
1,088,848	+		GFF1083	0.30	-0.8
1,088,864	+		GFF1083	0.32	-0.3
1,088,877	-		GFF1083	0.34	+1.1
1,088,879	+		GFF1083	0.34	-0.0
1,088,887	-		GFF1083	0.35	-0.1
1,088,895	-		GFF1083	0.36	+0.5
1,088,903	+		GFF1083	0.37	+0.9
1,088,903	+		GFF1083	0.37	-0.1
1,088,904	-		GFF1083	0.37	+0.9
1,088,910	-		GFF1083	0.38	-0.9
1,088,911	-		GFF1083	0.38	-0.2
1,088,938	-		GFF1083	0.42	-0.7
1,088,938	-		GFF1083	0.42	+0.4
1,088,960	+		GFF1083	0.45	-0.4
1,088,970	+		GFF1083	0.46	-0.5
1,088,970	-		GFF1083	0.46	+0.1
1,088,970	-		GFF1083	0.46	-0.3
1,088,978	-		GFF1083	0.47	+0.1
1,089,010	+		GFF1083	0.51	+0.4
1,089,018	-		GFF1083	0.52	-0.8
1,089,020	+		GFF1083	0.53	-0.7
1,089,020	+		GFF1083	0.53	+0.9
1,089,025	+		GFF1083	0.53	-0.4
1,089,028	-		GFF1083	0.54	-0.6
1,089,028	-		GFF1083	0.54	+0.1
1,089,033	-		GFF1083	0.54	-0.5
1,089,033	-		GFF1083	0.54	-0.1
1,089,037	+		GFF1083	0.55	-0.0
1,089,042	+		GFF1083	0.56	+0.9
1,089,042	+		GFF1083	0.56	-0.1
1,089,042	-		GFF1083	0.56	+0.0
1,089,045	-		GFF1083	0.56	+0.0
1,089,065	+		GFF1083	0.59	+0.6
1,089,090	+		GFF1083	0.62	+0.0
1,089,112	-		GFF1083	0.65	-0.0
1,089,112	-		GFF1083	0.65	+0.1
1,089,114	+		GFF1083	0.65	+0.1
1,089,147	+		GFF1083	0.70	-1.2
1,089,154	-		GFF1083	0.71	+0.6
1,089,155	-		GFF1083	0.71	+1.0
1,089,170	-		GFF1083	0.73	-0.6
1,089,195	+		GFF1083	0.76	-0.0
1,089,195	+		GFF1083	0.76	-0.0
1,089,196	-		GFF1083	0.76	+0.0
1,089,200	+		GFF1083	0.77	-2.0
1,089,200	+		GFF1083	0.77	-0.3
1,089,200	+		GFF1083	0.77	-1.0
1,089,200	+		GFF1083	0.77	-0.2
1,089,200	+		GFF1083	0.77	+0.3
1,089,200	+		GFF1083	0.77	+0.4
1,089,200	+		GFF1083	0.77	+0.7
1,089,200	+		GFF1083	0.77	+1.2
1,089,200	+		GFF1083	0.77	+0.2
1,089,200	+		GFF1083	0.77	-0.5
1,089,200	+		GFF1083	0.77	+0.9
1,089,200	+		GFF1083	0.77	-0.4
1,089,200	+		GFF1083	0.77	+0.7
1,089,200	+		GFF1083	0.77	+0.9
1,089,200	+		GFF1083	0.77	+1.4
1,089,205	+		GFF1083	0.77	+0.9
1,089,205	+		GFF1083	0.77	+0.1
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1,089,208	-		GFF1083	0.78	+0.7
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1,089,208	-		GFF1083	0.78	-0.2
1,089,208	-		GFF1083	0.78	-1.3
1,089,208	-		GFF1083	0.78	-0.4
1,089,208	-		GFF1083	0.78	-1.5
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1,089,208	-		GFF1083	0.78	-0.3
1,089,208	-		GFF1083	0.78	+0.1
1,089,208	-		GFF1083	0.78	+0.3
1,089,208	-		GFF1083	0.78	-0.5
1,089,208	-		GFF1083	0.78	-1.8
1,089,208	-		GFF1083	0.78	-0.9
1,089,213	-		GFF1083	0.78	-0.2
1,089,213	-		GFF1083	0.78	+0.3
1,089,213	-		GFF1083	0.78	-0.8
1,089,213	-		GFF1083	0.78	+0.5
1,089,213	-		GFF1083	0.78	-2.8
1,089,213	-		GFF1083	0.78	-0.6
1,089,231	-		GFF1083	0.81	-1.8
1,089,242	+		GFF1083	0.82	+1.1
1,089,247	+		GFF1083	0.83	-0.2
1,089,250	-		GFF1083	0.83	+0.5
1,089,250	-		GFF1083	0.83	+0.0
1,089,250	-		GFF1083	0.83	-0.3
1,089,250	-		GFF1083	0.83	-0.2
1,089,258	-		GFF1083	0.84	-1.6
1,089,262	-		GFF1083	0.85	-1.6
1,089,270	-		GFF1083	0.86	-0.8
1,089,284	-		GFF1083	0.88	+0.2
1,089,286	+		GFF1083	0.88	-2.7
1,089,287	+		GFF1083	0.88	-0.3
1,089,294	-		GFF1083	0.89	+0.3
1,089,297	+		GFF1083	0.90	+0.9
1,089,297	+		GFF1083	0.90	-1.5
1,089,300	-				-0.2
1,089,305	-				-0.5
1,089,323	-				+0.2
1,089,325	-				-0.7
1,089,342	+				+0.1
1,089,358	+				+0.5
1,089,368	+				+0.1
1,089,393	+				+0.8
1,089,394	-				-1.0
1,089,404	+				-0.2
1,089,407	-				-1.0
1,089,417	-				-0.4
1,089,419	-				+0.0
1,089,424	-				+0.7
1,089,452	-				-0.1
1,089,488	+				-0.3
1,089,496	-				-0.8
1,089,618	+				+0.6