Strain Fitness in Escherichia coli ECRC100 around OKFHMN_18685

Experiment: JK42

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JK42
3,628,544	-	ttdT	OKFHMN_18675	0.80	+0.3
3,628,640	+	ttdT	OKFHMN_18675	0.86	+1.9
3,628,641	-	ttdT	OKFHMN_18675	0.86	-0.9
3,628,713	-				-0.3
3,628,745	-				-0.9
3,628,775	+				-0.1
3,628,846	+				+1.1
3,628,890	+				-0.7
3,628,899	+				+0.5
3,628,900	-				-0.2
3,628,990	+	ttdB	OKFHMN_18680	0.17	+0.9
3,629,138	+	ttdB	OKFHMN_18680	0.41	+0.3
3,629,139	-	ttdB	OKFHMN_18680	0.41	+2.6
3,629,139	-	ttdB	OKFHMN_18680	0.41	+0.4
3,629,255	-	ttdB	OKFHMN_18680	0.60	+0.5
3,629,255	-	ttdB	OKFHMN_18680	0.60	-0.1
3,629,414	-	ttdB	OKFHMN_18680	0.87	+0.9
3,629,424	+	ttdB	OKFHMN_18680	0.88	-0.1
3,629,424	+	ttdB	OKFHMN_18680	0.88	-0.4
3,629,425	-	ttdB	OKFHMN_18680	0.88	-0.2
3,629,446	+				+0.1
3,629,447	-				-0.2
3,629,447	-				-0.3
3,629,930	-	ttdA	OKFHMN_18685	0.48	-1.8
3,630,115	+	ttdA	OKFHMN_18685	0.69	-0.0
3,630,171	+	ttdA	OKFHMN_18685	0.75	-0.4
3,630,171	+	ttdA	OKFHMN_18685	0.75	-0.4
3,630,172	-	ttdA	OKFHMN_18685	0.75	+2.2
3,630,240	+	ttdA	OKFHMN_18685	0.82	-0.7
3,630,241	-	ttdA	OKFHMN_18685	0.83	+0.5
3,630,283	+	ttdA	OKFHMN_18685	0.87	+0.2
3,630,293	-	ttdA	OKFHMN_18685	0.88	+0.2
3,630,384	+				-0.3
3,630,388	-				-0.4
3,630,600	+				-1.4
3,630,605	-				+1.9
3,630,746	+	ttdR	OKFHMN_18690	0.15	+0.1
3,630,746	+	ttdR	OKFHMN_18690	0.15	-0.2
3,630,847	-	ttdR	OKFHMN_18690	0.26	-0.2
3,630,990	+	ttdR	OKFHMN_18690	0.41	+0.1
3,630,990	+	ttdR	OKFHMN_18690	0.41	-0.2
3,631,111	+	ttdR	OKFHMN_18690	0.54	-0.2
3,631,172	-	ttdR	OKFHMN_18690	0.60	-2.3
3,631,331	+	ttdR	OKFHMN_18690	0.77	+0.3
3,631,331	+	ttdR	OKFHMN_18690	0.77	+0.1