Experiment: JK42
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ehaG and OKFHMN_15790 are separated by 43 nucleotides OKFHMN_15790 and yibL are separated by 644 nucleotides
OKFHMN_15785: ehaG - trimeric autotransporter adhesin EhaG, at 3,051,203 to 3,055,969
ehaG
OKFHMN_15790: OKFHMN_15790 - DUF3251 domain-containing protein, at 3,056,013 to 3,056,594
_15790
OKFHMN_15795: yibL - YibL family ribosome-associated protein, at 3,057,239 to 3,057,601
yibL
Position (kb)
3056
3057 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3055.028 kb on - strand, within ehaG at 3055.028 kb on - strand, within ehaG at 3055.070 kb on + strand, within ehaG at 3055.192 kb on + strand, within ehaG at 3055.192 kb on + strand, within ehaG at 3055.192 kb on + strand, within ehaG at 3055.192 kb on + strand, within ehaG at 3055.201 kb on + strand, within ehaG at 3055.234 kb on + strand, within ehaG at 3055.234 kb on + strand, within ehaG at 3055.235 kb on - strand, within ehaG at 3055.235 kb on - strand, within ehaG at 3055.235 kb on - strand, within ehaG at 3055.235 kb on - strand, within ehaG at 3055.235 kb on - strand, within ehaG at 3055.237 kb on + strand, within ehaG at 3055.238 kb on - strand, within ehaG at 3055.238 kb on - strand, within ehaG at 3055.258 kb on + strand, within ehaG at 3055.336 kb on + strand, within ehaG at 3055.397 kb on - strand, within ehaG at 3055.397 kb on - strand, within ehaG at 3055.480 kb on + strand, within ehaG at 3055.481 kb on - strand, within ehaG at 3055.481 kb on - strand, within ehaG at 3055.562 kb on + strand at 3055.563 kb on - strand at 3055.564 kb on + strand at 3055.565 kb on - strand at 3055.565 kb on - strand at 3055.651 kb on + strand at 3055.651 kb on + strand at 3055.652 kb on - strand at 3055.652 kb on - strand at 3055.652 kb on - strand at 3055.654 kb on - strand at 3055.654 kb on - strand at 3055.667 kb on + strand at 3055.668 kb on - strand at 3055.668 kb on - strand at 3055.668 kb on - strand at 3055.668 kb on - strand at 3055.677 kb on + strand at 3055.677 kb on + strand at 3055.711 kb on + strand at 3055.718 kb on - strand at 3055.739 kb on + strand at 3055.739 kb on + strand at 3055.740 kb on - strand at 3055.741 kb on + strand at 3055.741 kb on + strand at 3055.776 kb on + strand at 3055.870 kb on + strand at 3055.924 kb on - strand at 3056.098 kb on + strand, within OKFHMN_15790 at 3056.262 kb on - strand, within OKFHMN_15790 at 3056.292 kb on + strand, within OKFHMN_15790 at 3056.460 kb on + strand, within OKFHMN_15790 at 3056.627 kb on - strand at 3056.766 kb on + strand at 3057.212 kb on + strand at 3057.241 kb on - strand at 3057.253 kb on + strand at 3057.498 kb on + strand, within yibL at 3057.499 kb on - strand, within yibL
Per-strain Table
Position Strand Gene LocusTag Fraction JK42 remove 3,055,028 - ehaG OKFHMN_15785 0.80 -0.5 3,055,028 - ehaG OKFHMN_15785 0.80 +0.1 3,055,070 + ehaG OKFHMN_15785 0.81 -0.5 3,055,192 + ehaG OKFHMN_15785 0.84 -0.2 3,055,192 + ehaG OKFHMN_15785 0.84 -0.1 3,055,192 + ehaG OKFHMN_15785 0.84 +1.1 3,055,192 + ehaG OKFHMN_15785 0.84 -0.7 3,055,201 + ehaG OKFHMN_15785 0.84 +0.7 3,055,234 + ehaG OKFHMN_15785 0.85 +0.1 3,055,234 + ehaG OKFHMN_15785 0.85 +0.0 3,055,235 - ehaG OKFHMN_15785 0.85 -3.7 3,055,235 - ehaG OKFHMN_15785 0.85 -0.6 3,055,235 - ehaG OKFHMN_15785 0.85 -0.1 3,055,235 - ehaG OKFHMN_15785 0.85 -1.6 3,055,235 - ehaG OKFHMN_15785 0.85 -0.4 3,055,237 + ehaG OKFHMN_15785 0.85 +0.9 3,055,238 - ehaG OKFHMN_15785 0.85 +0.0 3,055,238 - ehaG OKFHMN_15785 0.85 +0.4 3,055,258 + ehaG OKFHMN_15785 0.85 +0.0 3,055,336 + ehaG OKFHMN_15785 0.87 -0.0 3,055,397 - ehaG OKFHMN_15785 0.88 +0.5 3,055,397 - ehaG OKFHMN_15785 0.88 +0.9 3,055,480 + ehaG OKFHMN_15785 0.90 +0.8 3,055,481 - ehaG OKFHMN_15785 0.90 -0.1 3,055,481 - ehaG OKFHMN_15785 0.90 -2.1 3,055,562 + +2.5 3,055,563 - -1.0 3,055,564 + -0.2 3,055,565 - -0.0 3,055,565 - -0.4 3,055,651 + -0.2 3,055,651 + +0.0 3,055,652 - -0.3 3,055,652 - +0.3 3,055,652 - -0.7 3,055,654 - -0.4 3,055,654 - +0.0 3,055,667 + -1.0 3,055,668 - -0.6 3,055,668 - +0.2 3,055,668 - +0.0 3,055,668 - +0.4 3,055,677 + +2.9 3,055,677 + -0.1 3,055,711 + +2.5 3,055,718 - +1.2 3,055,739 + +0.5 3,055,739 + -0.3 3,055,740 - +0.2 3,055,741 + +0.1 3,055,741 + -0.0 3,055,776 + -0.5 3,055,870 + +0.0 3,055,924 - -1.1 3,056,098 + OKFHMN_15790 0.15 -0.3 3,056,262 - OKFHMN_15790 0.43 +1.2 3,056,292 + OKFHMN_15790 0.48 -1.2 3,056,460 + OKFHMN_15790 0.77 -0.3 3,056,627 - -0.4 3,056,766 + +0.0 3,057,212 + +0.9 3,057,241 - -0.1 3,057,253 + -0.4 3,057,498 + yibL OKFHMN_15795 0.71 -0.3 3,057,499 - yibL OKFHMN_15795 0.72 -0.4
Or see this region's nucleotide sequence