Strain Fitness in Escherichia coli ECRC100 around OKFHMN_09720

Experiment: JK42

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JK42
1,809,182	-	ykfJ	OKFHMN_09710	0.62	+0.7
1,809,182	-	ykfJ	OKFHMN_09710	0.62	-0.3
1,809,232	-	ykfJ	OKFHMN_09710	0.81	-0.9
1,809,260	+				+0.8
1,809,261	-				+2.4
1,809,272	+				+0.1
1,809,273	-				+0.2
1,809,273	-				+0.3
1,809,284	+				-0.5
1,809,296	-				-0.5
1,809,312	-				+0.1
1,809,352	-				-0.7
1,809,409	+				-0.1
1,809,569	-				-0.5
1,809,606	-				-0.2
1,809,804	+	yafP	OKFHMN_09715	0.57	+1.6
1,809,811	-	yafP	OKFHMN_09715	0.59	+1.0
1,809,813	-	yafP	OKFHMN_09715	0.59	-0.5
1,810,024	+				+0.8
1,810,030	+				+1.8
1,810,030	+				-0.4
1,810,031	-				-0.7
1,810,046	+				-0.2
1,810,108	-				+0.1
1,810,190	-		OKFHMN_09720	0.17	+0.2
1,810,338	+		OKFHMN_09720	0.64	+0.2
1,810,339	-		OKFHMN_09720	0.65	+1.2
1,810,365	-		OKFHMN_09720	0.73	-0.1
1,810,366	+		OKFHMN_09720	0.73	+0.2
1,810,487	-	yafN	OKFHMN_09725	0.12	+0.7
1,810,646	-	yafN	OKFHMN_09725	0.66	-1.0
1,810,676	-	yafN	OKFHMN_09725	0.77	-0.1
1,810,680	+	yafN	OKFHMN_09725	0.78	+0.8
1,810,701	-	yafN	OKFHMN_09725	0.85	+1.1
1,810,745	-				-0.1
1,810,792	+				+0.8
1,811,096	-	dinB	OKFHMN_09730	0.28	-1.7
1,811,177	-	dinB	OKFHMN_09730	0.36	+0.8
1,811,215	+	dinB	OKFHMN_09730	0.40	-1.5
1,811,243	+	dinB	OKFHMN_09730	0.42	+0.2