Experiment: JK42
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ddlA and yaiZ are separated by 23 nucleotides yaiZ and yaiY are separated by 259 nucleotides yaiY and yaiW are separated by 58 nucleotides
OKFHMN_08635: ddlA - D-alanine--D-alanine ligase, at 1,612,302 to 1,613,396
ddlA
OKFHMN_08640: yaiZ - Uncharacterized protein YaiZ, at 1,613,420 to 1,613,632
yaiZ
OKFHMN_08645: yaiY - Inner membrane protein YaiY, at 1,613,892 to 1,614,200
yaiY
OKFHMN_08650: yaiW - surface-exposed outer membrane lipoprotein YaiW, at 1,614,259 to 1,615,353
yaiW
Position (kb)
1613
1614
1615 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1612.894 kb on + strand, within ddlA at 1612.911 kb on + strand, within ddlA at 1613.061 kb on + strand, within ddlA at 1613.062 kb on - strand, within ddlA at 1613.067 kb on + strand, within ddlA at 1613.079 kb on + strand, within ddlA at 1613.079 kb on + strand, within ddlA at 1613.080 kb on - strand, within ddlA at 1613.080 kb on - strand, within ddlA at 1613.108 kb on - strand, within ddlA at 1613.279 kb on + strand, within ddlA at 1613.280 kb on - strand, within ddlA at 1613.280 kb on - strand, within ddlA at 1613.280 kb on - strand, within ddlA at 1613.317 kb on - strand at 1613.394 kb on + strand at 1613.395 kb on - strand at 1613.415 kb on + strand at 1613.482 kb on + strand, within yaiZ at 1613.561 kb on - strand, within yaiZ at 1613.570 kb on + strand, within yaiZ at 1613.571 kb on - strand, within yaiZ at 1613.573 kb on - strand, within yaiZ at 1613.573 kb on - strand, within yaiZ at 1613.573 kb on - strand, within yaiZ at 1613.593 kb on - strand, within yaiZ at 1613.593 kb on - strand, within yaiZ at 1613.593 kb on - strand, within yaiZ at 1613.596 kb on - strand, within yaiZ at 1613.596 kb on - strand, within yaiZ at 1613.596 kb on - strand, within yaiZ at 1613.596 kb on - strand, within yaiZ at 1613.596 kb on - strand, within yaiZ at 1613.792 kb on + strand at 1613.793 kb on - strand at 1613.841 kb on - strand at 1613.971 kb on - strand, within yaiY at 1614.206 kb on - strand at 1614.411 kb on - strand, within yaiW at 1614.423 kb on - strand, within yaiW at 1614.423 kb on - strand, within yaiW at 1614.423 kb on - strand, within yaiW at 1614.464 kb on - strand, within yaiW at 1614.627 kb on + strand, within yaiW at 1614.638 kb on + strand, within yaiW at 1614.684 kb on - strand, within yaiW at 1614.684 kb on - strand, within yaiW at 1614.710 kb on + strand, within yaiW at 1614.714 kb on + strand, within yaiW at 1614.928 kb on - strand, within yaiW at 1614.951 kb on + strand, within yaiW
Per-strain Table
Position Strand Gene LocusTag Fraction JK42 remove 1,612,894 + ddlA OKFHMN_08635 0.54 -0.9 1,612,911 + ddlA OKFHMN_08635 0.56 -0.1 1,613,061 + ddlA OKFHMN_08635 0.69 +0.4 1,613,062 - ddlA OKFHMN_08635 0.69 +0.9 1,613,067 + ddlA OKFHMN_08635 0.70 +0.6 1,613,079 + ddlA OKFHMN_08635 0.71 -0.9 1,613,079 + ddlA OKFHMN_08635 0.71 -0.3 1,613,080 - ddlA OKFHMN_08635 0.71 -0.8 1,613,080 - ddlA OKFHMN_08635 0.71 +0.3 1,613,108 - ddlA OKFHMN_08635 0.74 +0.7 1,613,279 + ddlA OKFHMN_08635 0.89 +0.1 1,613,280 - ddlA OKFHMN_08635 0.89 +2.2 1,613,280 - ddlA OKFHMN_08635 0.89 +0.3 1,613,280 - ddlA OKFHMN_08635 0.89 -0.0 1,613,317 - -0.6 1,613,394 + -0.2 1,613,395 - -0.3 1,613,415 + +3.7 1,613,482 + yaiZ OKFHMN_08640 0.29 -0.3 1,613,561 - yaiZ OKFHMN_08640 0.66 +0.3 1,613,570 + yaiZ OKFHMN_08640 0.70 -1.1 1,613,571 - yaiZ OKFHMN_08640 0.71 +1.2 1,613,573 - yaiZ OKFHMN_08640 0.72 -1.6 1,613,573 - yaiZ OKFHMN_08640 0.72 -1.5 1,613,573 - yaiZ OKFHMN_08640 0.72 +0.5 1,613,593 - yaiZ OKFHMN_08640 0.81 -0.3 1,613,593 - yaiZ OKFHMN_08640 0.81 +0.3 1,613,593 - yaiZ OKFHMN_08640 0.81 +0.1 1,613,596 - yaiZ OKFHMN_08640 0.83 +0.3 1,613,596 - yaiZ OKFHMN_08640 0.83 -0.1 1,613,596 - yaiZ OKFHMN_08640 0.83 +1.5 1,613,596 - yaiZ OKFHMN_08640 0.83 -0.3 1,613,596 - yaiZ OKFHMN_08640 0.83 +1.2 1,613,792 + +0.1 1,613,793 - +0.0 1,613,841 - +1.0 1,613,971 - yaiY OKFHMN_08645 0.26 -1.1 1,614,206 - -0.6 1,614,411 - yaiW OKFHMN_08650 0.14 -1.1 1,614,423 - yaiW OKFHMN_08650 0.15 -0.8 1,614,423 - yaiW OKFHMN_08650 0.15 +0.5 1,614,423 - yaiW OKFHMN_08650 0.15 -1.2 1,614,464 - yaiW OKFHMN_08650 0.19 -0.3 1,614,627 + yaiW OKFHMN_08650 0.34 +1.3 1,614,638 + yaiW OKFHMN_08650 0.35 -0.3 1,614,684 - yaiW OKFHMN_08650 0.39 +1.1 1,614,684 - yaiW OKFHMN_08650 0.39 -1.3 1,614,710 + yaiW OKFHMN_08650 0.41 -0.6 1,614,714 + yaiW OKFHMN_08650 0.42 -0.6 1,614,928 - yaiW OKFHMN_08650 0.61 +0.2 1,614,951 + yaiW OKFHMN_08650 0.63 -0.5
Or see this region's nucleotide sequence