Experiment: JK42
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybhL and moaE are separated by 135 nucleotides moaE and moaD are separated by 1 nucleotides moaD and moaC overlap by 8 nucleotides moaC and moaB are separated by 2 nucleotides moaB and moaA are separated by 21 nucleotides
OKFHMN_06345: ybhL - Inner membrane protein YbhL, at 1,130,322 to 1,131,026
ybhL
OKFHMN_06350: moaE - molybdopterin synthase catalytic subunit MoaE, at 1,131,162 to 1,131,614
moaE
OKFHMN_06355: moaD - molybdopterin synthase sulfur carrier subunit, at 1,131,616 to 1,131,861
moaD
OKFHMN_06360: moaC - cyclic pyranopterin monophosphate synthase MoaC, at 1,131,854 to 1,132,339
moaC
OKFHMN_06365: moaB - molybdenum cofactor biosynthesis protein B, at 1,132,342 to 1,132,854
moaB
OKFHMN_06370: moaA - GTP 3',8-cyclase MoaA, at 1,132,876 to 1,133,865
moaA
Position (kb) 1131
1132
1133 Strain fitness (log2 ratio) -1
0
1
2 at 1130.954 kb on - strand, within ybhL at 1130.966 kb on + strand at 1130.968 kb on + strand at 1130.968 kb on + strand at 1131.044 kb on - strand at 1131.052 kb on + strand at 1131.057 kb on + strand at 1131.057 kb on + strand at 1131.163 kb on + strand at 1131.352 kb on - strand, within moaE at 1131.618 kb on - strand at 1131.709 kb on + strand, within moaD at 1131.960 kb on + strand, within moaC at 1131.960 kb on + strand, within moaC at 1132.044 kb on - strand, within moaC at 1132.162 kb on + strand, within moaC at 1132.163 kb on - strand, within moaC at 1132.179 kb on - strand, within moaC at 1132.339 kb on + strand at 1132.344 kb on - strand at 1132.344 kb on - strand at 1132.344 kb on - strand at 1132.369 kb on - strand at 1132.533 kb on + strand, within moaB at 1132.533 kb on + strand, within moaB at 1132.672 kb on + strand, within moaB at 1132.798 kb on - strand, within moaB at 1132.844 kb on - strand at 1132.908 kb on + strand at 1133.142 kb on - strand, within moaA
Per-strain Table
Position Strand Gene LocusTag Fraction JK42 remove 1,130,954 - ybhL OKFHMN_06345 0.90 +0.6 1,130,966 + -0.5 1,130,968 + -0.2 1,130,968 + +2.2 1,131,044 - +0.4 1,131,052 + +0.9 1,131,057 + -0.4 1,131,057 + +0.3 1,131,163 + +0.6 1,131,352 - moaE OKFHMN_06350 0.42 +0.2 1,131,618 - +0.1 1,131,709 + moaD OKFHMN_06355 0.38 +0.3 1,131,960 + moaC OKFHMN_06360 0.22 +0.0 1,131,960 + moaC OKFHMN_06360 0.22 +0.6 1,132,044 - moaC OKFHMN_06360 0.39 -0.7 1,132,162 + moaC OKFHMN_06360 0.63 +0.6 1,132,163 - moaC OKFHMN_06360 0.64 -0.4 1,132,179 - moaC OKFHMN_06360 0.67 +0.7 1,132,339 + +2.6 1,132,344 - +0.2 1,132,344 - +0.8 1,132,344 - +0.1 1,132,369 - -0.0 1,132,533 + moaB OKFHMN_06365 0.37 +0.3 1,132,533 + moaB OKFHMN_06365 0.37 -0.0 1,132,672 + moaB OKFHMN_06365 0.64 +0.1 1,132,798 - moaB OKFHMN_06365 0.89 -0.0 1,132,844 - +0.2 1,132,908 + -0.5 1,133,142 - moaA OKFHMN_06370 0.27 -0.7
Or see this region's nucleotide sequence